Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1914 and Ac3H11_1915 are separated by 32 nucleotides Ac3H11_1915 and Ac3H11_1916 are separated by 12 nucleotides Ac3H11_1916 and Ac3H11_1917 are separated by 283 nucleotides
Ac3H11_1914 - Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), at 121,369 to 123,771
_1914
Ac3H11_1915 - FIG00349726: hypothetical protein, at 123,804 to 124,313
_1915
Ac3H11_1916 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 124,326 to 125,525
_1916
Ac3H11_1917 - conserved hypothetical protein, at 125,809 to 126,699
_1917
Position (kb) 124
125
126 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 123.583 kb on + strand at 123.583 kb on + strand at 123.583 kb on + strand at 123.583 kb on + strand at 123.583 kb on + strand at 123.584 kb on - strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.664 kb on + strand at 123.665 kb on - strand at 123.665 kb on - strand at 123.665 kb on - strand at 123.665 kb on - strand at 123.665 kb on - strand at 123.883 kb on + strand, within Ac3H11_1915 at 123.883 kb on + strand, within Ac3H11_1915 at 123.883 kb on + strand, within Ac3H11_1915 at 123.883 kb on + strand, within Ac3H11_1915 at 123.883 kb on + strand, within Ac3H11_1915 at 123.884 kb on - strand, within Ac3H11_1915 at 123.917 kb on + strand, within Ac3H11_1915 at 123.918 kb on - strand, within Ac3H11_1915 at 123.918 kb on - strand, within Ac3H11_1915 at 123.918 kb on - strand, within Ac3H11_1915 at 124.267 kb on + strand at 124.267 kb on + strand at 124.267 kb on + strand at 124.267 kb on + strand at 124.267 kb on + strand at 124.267 kb on + strand at 124.268 kb on - strand at 124.268 kb on - strand at 124.268 kb on - strand at 124.268 kb on - strand at 124.268 kb on - strand at 124.268 kb on - strand at 124.268 kb on - strand at 124.271 kb on + strand at 124.271 kb on + strand at 124.271 kb on + strand at 124.271 kb on + strand at 124.271 kb on + strand at 124.271 kb on + strand at 124.271 kb on + strand at 124.271 kb on + strand at 124.271 kb on + strand at 124.271 kb on + strand at 124.272 kb on - strand at 124.272 kb on - strand at 124.272 kb on - strand at 124.272 kb on - strand at 124.272 kb on - strand at 124.272 kb on - strand at 124.272 kb on - strand at 124.272 kb on - strand at 124.272 kb on - strand at 124.272 kb on - strand at 124.353 kb on + strand at 124.353 kb on + strand at 124.353 kb on + strand at 124.353 kb on + strand at 124.353 kb on + strand at 124.353 kb on + strand at 124.354 kb on - strand at 124.354 kb on - strand at 124.354 kb on - strand at 124.354 kb on - strand at 124.354 kb on - strand at 124.354 kb on - strand at 124.354 kb on - strand at 124.354 kb on - strand at 124.354 kb on - strand at 124.401 kb on + strand at 124.401 kb on + strand at 124.401 kb on + strand at 124.401 kb on + strand at 125.179 kb on - strand, within Ac3H11_1916 at 125.223 kb on - strand, within Ac3H11_1916 at 125.283 kb on + strand, within Ac3H11_1916 at 125.283 kb on + strand, within Ac3H11_1916 at 125.284 kb on - strand, within Ac3H11_1916 at 125.284 kb on - strand, within Ac3H11_1916 at 125.284 kb on - strand, within Ac3H11_1916 at 125.423 kb on + strand at 125.460 kb on + strand at 125.460 kb on + strand at 125.460 kb on + strand at 125.460 kb on + strand at 125.461 kb on - strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.486 kb on + strand at 125.487 kb on - strand at 125.523 kb on + strand at 125.524 kb on - strand at 125.524 kb on - strand at 125.524 kb on - strand at 125.524 kb on - strand at 125.524 kb on - strand at 125.524 kb on - strand at 125.579 kb on + strand at 125.579 kb on + strand at 125.579 kb on + strand at 125.579 kb on + strand at 125.579 kb on + strand at 125.580 kb on - strand at 125.580 kb on - strand at 125.580 kb on - strand at 125.580 kb on - strand at 125.588 kb on + strand at 125.588 kb on + strand at 125.588 kb on + strand at 125.588 kb on + strand at 125.589 kb on - strand at 125.589 kb on - strand at 125.589 kb on - strand at 125.589 kb on - strand at 125.589 kb on - strand at 125.589 kb on - strand at 125.589 kb on - strand at 125.637 kb on + strand at 125.743 kb on + strand at 125.744 kb on - strand at 125.757 kb on - strand at 125.757 kb on - strand at 125.757 kb on - strand at 125.863 kb on + strand at 125.863 kb on + strand at 125.864 kb on - strand at 125.932 kb on + strand, within Ac3H11_1917 at 125.932 kb on + strand, within Ac3H11_1917 at 125.932 kb on + strand, within Ac3H11_1917 at 125.933 kb on - strand, within Ac3H11_1917 at 125.933 kb on - strand, within Ac3H11_1917 at 125.979 kb on + strand, within Ac3H11_1917 at 125.979 kb on + strand, within Ac3H11_1917 at 125.979 kb on + strand, within Ac3H11_1917 at 125.980 kb on - strand, within Ac3H11_1917 at 125.980 kb on - strand, within Ac3H11_1917 at 125.980 kb on - strand, within Ac3H11_1917 at 125.980 kb on - strand, within Ac3H11_1917 at 125.980 kb on - strand, within Ac3H11_1917 at 125.980 kb on - strand, within Ac3H11_1917 at 126.064 kb on + strand, within Ac3H11_1917 at 126.064 kb on + strand, within Ac3H11_1917 at 126.064 kb on + strand, within Ac3H11_1917 at 126.065 kb on - strand, within Ac3H11_1917 at 126.065 kb on - strand, within Ac3H11_1917 at 126.115 kb on + strand, within Ac3H11_1917 at 126.115 kb on + strand, within Ac3H11_1917 at 126.115 kb on + strand, within Ac3H11_1917 at 126.116 kb on - strand, within Ac3H11_1917 at 126.116 kb on - strand, within Ac3H11_1917 at 126.116 kb on - strand, within Ac3H11_1917 at 126.116 kb on - strand, within Ac3H11_1917 at 126.211 kb on + strand, within Ac3H11_1917 at 126.212 kb on - strand, within Ac3H11_1917 at 126.253 kb on + strand, within Ac3H11_1917 at 126.253 kb on + strand, within Ac3H11_1917 at 126.253 kb on + strand, within Ac3H11_1917 at 126.253 kb on + strand, within Ac3H11_1917 at 126.253 kb on + strand, within Ac3H11_1917 at 126.254 kb on - strand, within Ac3H11_1917 at 126.298 kb on + strand, within Ac3H11_1917 at 126.299 kb on - strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.424 kb on + strand, within Ac3H11_1917 at 126.424 kb on + strand, within Ac3H11_1917 at 126.514 kb on + strand, within Ac3H11_1917 at 126.514 kb on + strand, within Ac3H11_1917 at 126.515 kb on - strand, within Ac3H11_1917
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 123,583 + -0.0 123,583 + +0.1 123,583 + +1.2 123,583 + -0.0 123,583 + +0.2 123,584 - +0.8 123,635 + +0.5 123,635 + -0.3 123,635 + -0.1 123,635 + +0.2 123,635 + -0.8 123,635 + -0.1 123,635 + +0.8 123,635 + -1.1 123,635 + -0.3 123,635 + -0.2 123,635 + -1.2 123,635 + -0.4 123,635 + -1.0 123,635 + -0.9 123,635 + +0.5 123,635 + +1.2 123,635 + -1.1 123,636 - +0.6 123,636 - +0.2 123,636 - +0.6 123,636 - -1.4 123,636 - -0.6 123,636 - +1.0 123,636 - -0.6 123,636 - -0.4 123,636 - +1.0 123,636 - +0.4 123,636 - -2.6 123,636 - -0.7 123,664 + +0.0 123,665 - +0.6 123,665 - -0.1 123,665 - +0.1 123,665 - -1.8 123,665 - +0.1 123,883 + Ac3H11_1915 0.15 -1.0 123,883 + Ac3H11_1915 0.15 -0.5 123,883 + Ac3H11_1915 0.15 +0.7 123,883 + Ac3H11_1915 0.15 +4.5 123,883 + Ac3H11_1915 0.15 +0.4 123,884 - Ac3H11_1915 0.16 +0.0 123,917 + Ac3H11_1915 0.22 +0.5 123,918 - Ac3H11_1915 0.22 +0.4 123,918 - Ac3H11_1915 0.22 +0.4 123,918 - Ac3H11_1915 0.22 +1.0 124,267 + +0.1 124,267 + +0.3 124,267 + -1.3 124,267 + +0.2 124,267 + +0.2 124,267 + -1.0 124,268 - -0.1 124,268 - +0.7 124,268 - +0.9 124,268 - +0.3 124,268 - +0.1 124,268 - +1.3 124,268 - -1.2 124,271 + +1.9 124,271 + -3.0 124,271 + +0.3 124,271 + +0.7 124,271 + +0.1 124,271 + +0.8 124,271 + +0.8 124,271 + -0.1 124,271 + +1.1 124,271 + +0.4 124,272 - +1.7 124,272 - +0.3 124,272 - +0.8 124,272 - +0.4 124,272 - +0.2 124,272 - -0.3 124,272 - -1.2 124,272 - +0.3 124,272 - -0.1 124,272 - -0.6 124,353 + -1.5 124,353 + -0.4 124,353 + -0.0 124,353 + +0.4 124,353 + -1.2 124,353 + +0.1 124,354 - +0.6 124,354 - -0.1 124,354 - -0.5 124,354 - -2.1 124,354 - +0.1 124,354 - +0.6 124,354 - +0.7 124,354 - -1.1 124,354 - -1.1 124,401 + -0.0 124,401 + +0.8 124,401 + +0.7 124,401 + -0.8 125,179 - Ac3H11_1916 0.71 -0.6 125,223 - Ac3H11_1916 0.75 -0.3 125,283 + Ac3H11_1916 0.80 -0.1 125,283 + Ac3H11_1916 0.80 -0.0 125,284 - Ac3H11_1916 0.80 -0.4 125,284 - Ac3H11_1916 0.80 +0.0 125,284 - Ac3H11_1916 0.80 -0.6 125,423 + -2.4 125,460 + +0.3 125,460 + -0.3 125,460 + -0.4 125,460 + +1.3 125,461 - +0.1 125,482 + -1.0 125,482 + +0.1 125,482 + -1.4 125,482 + -1.2 125,482 + +0.8 125,482 + +1.3 125,482 + -0.0 125,482 + +0.8 125,482 + +0.3 125,482 + +1.1 125,482 + +0.8 125,482 + +0.7 125,482 + +0.3 125,482 + -0.6 125,482 + -0.9 125,482 + +0.2 125,482 + -0.0 125,483 - +0.2 125,483 - -0.9 125,483 - +0.9 125,483 - +0.6 125,483 - -0.0 125,483 - +0.3 125,483 - +0.3 125,483 - -0.1 125,483 - +0.3 125,483 - -2.5 125,483 - +0.6 125,483 - -0.4 125,483 - -0.4 125,483 - +0.9 125,483 - -1.6 125,483 - +0.1 125,486 + -2.6 125,487 - +0.4 125,523 + -1.2 125,524 - -1.0 125,524 - +1.7 125,524 - +0.9 125,524 - +1.1 125,524 - -3.1 125,524 - -2.0 125,579 + +0.5 125,579 + +1.1 125,579 + -0.1 125,579 + +0.1 125,579 + -0.5 125,580 - +0.4 125,580 - +0.7 125,580 - -0.2 125,580 - +0.8 125,588 + -0.6 125,588 + +0.9 125,588 + +1.2 125,588 + +0.0 125,589 - -0.1 125,589 - -0.1 125,589 - +0.1 125,589 - +0.3 125,589 - +0.2 125,589 - +0.3 125,589 - -0.8 125,637 + -1.7 125,743 + +0.1 125,744 - +0.5 125,757 - -0.2 125,757 - +1.1 125,757 - +0.6 125,863 + +0.2 125,863 + +0.4 125,864 - +0.9 125,932 + Ac3H11_1917 0.14 -0.8 125,932 + Ac3H11_1917 0.14 +1.9 125,932 + Ac3H11_1917 0.14 -0.6 125,933 - Ac3H11_1917 0.14 +0.7 125,933 - Ac3H11_1917 0.14 +0.8 125,979 + Ac3H11_1917 0.19 +1.3 125,979 + Ac3H11_1917 0.19 +0.3 125,979 + Ac3H11_1917 0.19 -0.4 125,980 - Ac3H11_1917 0.19 -0.9 125,980 - Ac3H11_1917 0.19 -0.7 125,980 - Ac3H11_1917 0.19 -0.5 125,980 - Ac3H11_1917 0.19 +0.5 125,980 - Ac3H11_1917 0.19 +0.9 125,980 - Ac3H11_1917 0.19 -0.6 126,064 + Ac3H11_1917 0.29 -0.1 126,064 + Ac3H11_1917 0.29 +0.4 126,064 + Ac3H11_1917 0.29 -1.3 126,065 - Ac3H11_1917 0.29 -0.2 126,065 - Ac3H11_1917 0.29 +0.2 126,115 + Ac3H11_1917 0.34 -0.7 126,115 + Ac3H11_1917 0.34 +1.5 126,115 + Ac3H11_1917 0.34 +0.4 126,116 - Ac3H11_1917 0.34 -0.4 126,116 - Ac3H11_1917 0.34 -1.4 126,116 - Ac3H11_1917 0.34 -1.8 126,116 - Ac3H11_1917 0.34 +0.2 126,211 + Ac3H11_1917 0.45 -0.4 126,212 - Ac3H11_1917 0.45 +1.5 126,253 + Ac3H11_1917 0.50 +0.4 126,253 + Ac3H11_1917 0.50 +0.0 126,253 + Ac3H11_1917 0.50 -0.5 126,253 + Ac3H11_1917 0.50 -0.0 126,253 + Ac3H11_1917 0.50 -1.7 126,254 - Ac3H11_1917 0.50 +0.0 126,298 + Ac3H11_1917 0.55 -0.2 126,299 - Ac3H11_1917 0.55 -0.2 126,385 + Ac3H11_1917 0.65 +0.6 126,385 + Ac3H11_1917 0.65 +0.1 126,385 + Ac3H11_1917 0.65 -0.4 126,385 + Ac3H11_1917 0.65 +0.6 126,385 + Ac3H11_1917 0.65 +0.2 126,385 + Ac3H11_1917 0.65 -0.8 126,385 + Ac3H11_1917 0.65 -1.4 126,385 + Ac3H11_1917 0.65 -0.4 126,385 + Ac3H11_1917 0.65 +5.1 126,385 + Ac3H11_1917 0.65 +0.3 126,385 + Ac3H11_1917 0.65 -0.6 126,385 + Ac3H11_1917 0.65 +0.4 126,386 - Ac3H11_1917 0.65 +0.4 126,386 - Ac3H11_1917 0.65 -0.9 126,386 - Ac3H11_1917 0.65 -1.2 126,386 - Ac3H11_1917 0.65 +0.9 126,386 - Ac3H11_1917 0.65 +0.5 126,386 - Ac3H11_1917 0.65 +0.3 126,386 - Ac3H11_1917 0.65 +0.4 126,386 - Ac3H11_1917 0.65 +0.6 126,386 - Ac3H11_1917 0.65 +0.2 126,386 - Ac3H11_1917 0.65 +0.9 126,386 - Ac3H11_1917 0.65 +0.8 126,386 - Ac3H11_1917 0.65 +0.9 126,386 - Ac3H11_1917 0.65 -0.3 126,386 - Ac3H11_1917 0.65 +0.2 126,424 + Ac3H11_1917 0.69 +0.4 126,424 + Ac3H11_1917 0.69 -0.6 126,514 + Ac3H11_1917 0.79 +1.0 126,514 + Ac3H11_1917 0.79 -0.9 126,515 - Ac3H11_1917 0.79 +0.1
Or see this region's nucleotide sequence