Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1317 and Ac3H11_1318 are separated by 80 nucleotides Ac3H11_1318 and Ac3H11_1319 are separated by 190 nucleotides
Ac3H11_1317 - Permeases of the major facilitator superfamily, at 4,243 to 5,460
_1317
Ac3H11_1318 - Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1), at 5,541 to 6,584
_1318
Ac3H11_1319 - membrane protein, putative, at 6,775 to 7,848
_1319
Position (kb) 5
6
7 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4.897 kb on + strand, within Ac3H11_1317 at 4.897 kb on + strand, within Ac3H11_1317 at 4.897 kb on + strand, within Ac3H11_1317 at 4.897 kb on + strand, within Ac3H11_1317 at 4.898 kb on - strand, within Ac3H11_1317 at 5.048 kb on - strand, within Ac3H11_1317 at 5.396 kb on + strand at 5.396 kb on + strand at 5.396 kb on + strand at 5.485 kb on + strand at 6.847 kb on + strand at 6.847 kb on + strand at 6.847 kb on + strand at 6.847 kb on + strand at 6.847 kb on + strand at 6.848 kb on - strand at 6.848 kb on - strand at 7.096 kb on + strand, within Ac3H11_1319 at 7.096 kb on + strand, within Ac3H11_1319 at 7.120 kb on + strand, within Ac3H11_1319 at 7.138 kb on + strand, within Ac3H11_1319 at 7.138 kb on + strand, within Ac3H11_1319 at 7.138 kb on + strand, within Ac3H11_1319 at 7.138 kb on + strand, within Ac3H11_1319 at 7.138 kb on + strand, within Ac3H11_1319 at 7.138 kb on + strand, within Ac3H11_1319 at 7.138 kb on + strand, within Ac3H11_1319 at 7.138 kb on + strand, within Ac3H11_1319 at 7.138 kb on + strand, within Ac3H11_1319 at 7.138 kb on + strand, within Ac3H11_1319 at 7.138 kb on + strand, within Ac3H11_1319 at 7.139 kb on - strand, within Ac3H11_1319 at 7.139 kb on - strand, within Ac3H11_1319 at 7.139 kb on - strand, within Ac3H11_1319 at 7.139 kb on - strand, within Ac3H11_1319 at 7.139 kb on - strand, within Ac3H11_1319 at 7.139 kb on - strand, within Ac3H11_1319 at 7.139 kb on - strand, within Ac3H11_1319 at 7.240 kb on + strand, within Ac3H11_1319 at 7.240 kb on + strand, within Ac3H11_1319 at 7.241 kb on - strand, within Ac3H11_1319 at 7.241 kb on - strand, within Ac3H11_1319 at 7.241 kb on - strand, within Ac3H11_1319 at 7.241 kb on - strand, within Ac3H11_1319 at 7.241 kb on - strand, within Ac3H11_1319 at 7.241 kb on - strand, within Ac3H11_1319 at 7.241 kb on - strand, within Ac3H11_1319 at 7.309 kb on + strand, within Ac3H11_1319 at 7.309 kb on + strand, within Ac3H11_1319 at 7.310 kb on - strand, within Ac3H11_1319 at 7.522 kb on + strand, within Ac3H11_1319 at 7.522 kb on + strand, within Ac3H11_1319 at 7.522 kb on + strand, within Ac3H11_1319 at 7.523 kb on - strand, within Ac3H11_1319 at 7.523 kb on - strand, within Ac3H11_1319 at 7.523 kb on - strand, within Ac3H11_1319 at 7.523 kb on - strand, within Ac3H11_1319
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 4,897 + Ac3H11_1317 0.54 +1.3 4,897 + Ac3H11_1317 0.54 -0.4 4,897 + Ac3H11_1317 0.54 +0.2 4,897 + Ac3H11_1317 0.54 +1.4 4,898 - Ac3H11_1317 0.54 -0.5 5,048 - Ac3H11_1317 0.66 +0.4 5,396 + +0.5 5,396 + +0.8 5,396 + +2.6 5,485 + -0.9 6,847 + -2.5 6,847 + -1.7 6,847 + -0.5 6,847 + +0.3 6,847 + -1.5 6,848 - -1.3 6,848 - -0.5 7,096 + Ac3H11_1319 0.30 -0.2 7,096 + Ac3H11_1319 0.30 -1.4 7,120 + Ac3H11_1319 0.32 -0.3 7,138 + Ac3H11_1319 0.34 -1.0 7,138 + Ac3H11_1319 0.34 -0.4 7,138 + Ac3H11_1319 0.34 -2.1 7,138 + Ac3H11_1319 0.34 -2.3 7,138 + Ac3H11_1319 0.34 -0.1 7,138 + Ac3H11_1319 0.34 -1.4 7,138 + Ac3H11_1319 0.34 -2.1 7,138 + Ac3H11_1319 0.34 +0.0 7,138 + Ac3H11_1319 0.34 -1.2 7,138 + Ac3H11_1319 0.34 -0.2 7,138 + Ac3H11_1319 0.34 -1.6 7,139 - Ac3H11_1319 0.34 -0.9 7,139 - Ac3H11_1319 0.34 -0.3 7,139 - Ac3H11_1319 0.34 -1.3 7,139 - Ac3H11_1319 0.34 -1.1 7,139 - Ac3H11_1319 0.34 -0.4 7,139 - Ac3H11_1319 0.34 +0.5 7,139 - Ac3H11_1319 0.34 -0.9 7,240 + Ac3H11_1319 0.43 -1.0 7,240 + Ac3H11_1319 0.43 -1.7 7,241 - Ac3H11_1319 0.43 +0.2 7,241 - Ac3H11_1319 0.43 -0.6 7,241 - Ac3H11_1319 0.43 +0.8 7,241 - Ac3H11_1319 0.43 -3.3 7,241 - Ac3H11_1319 0.43 -1.0 7,241 - Ac3H11_1319 0.43 -1.1 7,241 - Ac3H11_1319 0.43 -2.1 7,309 + Ac3H11_1319 0.50 -2.9 7,309 + Ac3H11_1319 0.50 -0.9 7,310 - Ac3H11_1319 0.50 -1.0 7,522 + Ac3H11_1319 0.70 -2.2 7,522 + Ac3H11_1319 0.70 -0.4 7,522 + Ac3H11_1319 0.70 -0.4 7,523 - Ac3H11_1319 0.70 -0.9 7,523 - Ac3H11_1319 0.70 +0.4 7,523 - Ac3H11_1319 0.70 +0.9 7,523 - Ac3H11_1319 0.70 -1.5
Or see this region's nucleotide sequence