Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS05740 and AZOBR_RS05745 are separated by 6 nucleotides AZOBR_RS05745 and AZOBR_RS05750 are separated by 197 nucleotides AZOBR_RS05750 and AZOBR_RS05755 are separated by 306 nucleotides
AZOBR_RS05740: AZOBR_RS05740 - phosphatidylcholine synthase, at 1,217,343 to 1,218,038
_RS05740
AZOBR_RS05745: AZOBR_RS05745 - conserved exported protein of unknown function, at 1,218,045 to 1,218,320
_RS05745
AZOBR_RS05750: AZOBR_RS05750 - hypothetical protein, at 1,218,518 to 1,218,895
_RS05750
AZOBR_RS05755: AZOBR_RS05755 - Butyryl-CoA dehydrogenase (EC 1.3.8.1) (from data) , at 1,219,202 to 1,221,001
_RS05755
Position (kb)
1218
1219 Strain fitness (log2 ratio)
-1
0
1 at 1217.571 kb on + strand, within AZOBR_RS05740 at 1217.571 kb on + strand, within AZOBR_RS05740 at 1217.572 kb on - strand, within AZOBR_RS05740 at 1217.580 kb on + strand, within AZOBR_RS05740 at 1217.580 kb on + strand, within AZOBR_RS05740 at 1217.581 kb on - strand, within AZOBR_RS05740 at 1217.581 kb on - strand, within AZOBR_RS05740 at 1217.581 kb on - strand, within AZOBR_RS05740 at 1217.581 kb on - strand, within AZOBR_RS05740 at 1217.581 kb on - strand, within AZOBR_RS05740 at 1217.608 kb on - strand, within AZOBR_RS05740 at 1217.676 kb on + strand, within AZOBR_RS05740 at 1217.677 kb on - strand, within AZOBR_RS05740 at 1217.715 kb on + strand, within AZOBR_RS05740 at 1217.715 kb on + strand, within AZOBR_RS05740 at 1217.715 kb on + strand, within AZOBR_RS05740 at 1217.715 kb on + strand, within AZOBR_RS05740 at 1217.716 kb on - strand, within AZOBR_RS05740 at 1217.716 kb on - strand, within AZOBR_RS05740 at 1217.757 kb on + strand, within AZOBR_RS05740 at 1217.757 kb on + strand, within AZOBR_RS05740 at 1217.758 kb on - strand, within AZOBR_RS05740 at 1217.985 kb on + strand at 1217.988 kb on + strand at 1217.988 kb on + strand at 1217.989 kb on - strand at 1218.036 kb on + strand at 1218.603 kb on + strand, within AZOBR_RS05750 at 1218.603 kb on + strand, within AZOBR_RS05750 at 1218.618 kb on + strand, within AZOBR_RS05750 at 1218.738 kb on + strand, within AZOBR_RS05750 at 1218.739 kb on - strand, within AZOBR_RS05750 at 1218.739 kb on - strand, within AZOBR_RS05750 at 1219.428 kb on + strand, within AZOBR_RS05755 at 1219.429 kb on - strand, within AZOBR_RS05755 at 1219.687 kb on - strand, within AZOBR_RS05755
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 1,217,571 + AZOBR_RS05740 0.33 +0.2 1,217,571 + AZOBR_RS05740 0.33 +0.1 1,217,572 - AZOBR_RS05740 0.33 +0.1 1,217,580 + AZOBR_RS05740 0.34 +0.3 1,217,580 + AZOBR_RS05740 0.34 +0.1 1,217,581 - AZOBR_RS05740 0.34 +0.0 1,217,581 - AZOBR_RS05740 0.34 -0.0 1,217,581 - AZOBR_RS05740 0.34 -0.1 1,217,581 - AZOBR_RS05740 0.34 +0.1 1,217,581 - AZOBR_RS05740 0.34 +0.1 1,217,608 - AZOBR_RS05740 0.38 +0.6 1,217,676 + AZOBR_RS05740 0.48 -0.1 1,217,677 - AZOBR_RS05740 0.48 -0.4 1,217,715 + AZOBR_RS05740 0.53 -0.4 1,217,715 + AZOBR_RS05740 0.53 -0.1 1,217,715 + AZOBR_RS05740 0.53 -0.2 1,217,715 + AZOBR_RS05740 0.53 +1.2 1,217,716 - AZOBR_RS05740 0.54 +0.2 1,217,716 - AZOBR_RS05740 0.54 -0.1 1,217,757 + AZOBR_RS05740 0.59 +0.1 1,217,757 + AZOBR_RS05740 0.59 -0.2 1,217,758 - AZOBR_RS05740 0.60 +1.0 1,217,985 + -1.2 1,217,988 + +0.2 1,217,988 + -0.6 1,217,989 - -0.0 1,218,036 + -0.2 1,218,603 + AZOBR_RS05750 0.22 +0.8 1,218,603 + AZOBR_RS05750 0.22 -0.5 1,218,618 + AZOBR_RS05750 0.26 +0.3 1,218,738 + AZOBR_RS05750 0.58 +0.2 1,218,739 - AZOBR_RS05750 0.58 -0.2 1,218,739 - AZOBR_RS05750 0.58 -0.4 1,219,428 + AZOBR_RS05755 0.13 -0.1 1,219,429 - AZOBR_RS05755 0.13 +0.2 1,219,687 - AZOBR_RS05755 0.27 -0.9
Or see this region's nucleotide sequence