Experiment: D-Gluconic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_503 and Ac3H11_504 are separated by 66 nucleotides Ac3H11_504 and Ac3H11_505 are separated by 125 nucleotides Ac3H11_505 and Ac3H11_506 are separated by 184 nucleotides
Ac3H11_503 - Outer membrane protein assembly factor YaeT precursor, at 198,630 to 200,024
_503
Ac3H11_504 - FIG00348850: hypothetical protein, at 200,091 to 200,912
_504
Ac3H11_505 - Transcriptional regulator, TetR family, at 201,038 to 201,643
_505
Ac3H11_506 - biphenyl-2,3-diol 1,2-dioxygenase III-related protein, at 201,828 to 202,214
_506
Position (kb) 200
201 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 199.507 kb on + strand, within Ac3H11_503 at 199.507 kb on + strand, within Ac3H11_503 at 199.529 kb on + strand, within Ac3H11_503 at 199.530 kb on - strand, within Ac3H11_503 at 199.530 kb on - strand, within Ac3H11_503 at 199.621 kb on + strand, within Ac3H11_503 at 199.621 kb on + strand, within Ac3H11_503 at 199.621 kb on + strand, within Ac3H11_503 at 199.621 kb on + strand, within Ac3H11_503 at 199.622 kb on - strand, within Ac3H11_503 at 199.622 kb on - strand, within Ac3H11_503 at 199.622 kb on - strand, within Ac3H11_503 at 199.622 kb on - strand, within Ac3H11_503 at 199.622 kb on - strand, within Ac3H11_503 at 199.622 kb on - strand, within Ac3H11_503 at 199.622 kb on - strand, within Ac3H11_503 at 199.622 kb on - strand, within Ac3H11_503 at 199.682 kb on - strand, within Ac3H11_503 at 199.682 kb on - strand, within Ac3H11_503 at 199.682 kb on - strand, within Ac3H11_503 at 199.682 kb on - strand, within Ac3H11_503 at 199.701 kb on + strand, within Ac3H11_503 at 199.701 kb on + strand, within Ac3H11_503 at 199.701 kb on + strand, within Ac3H11_503 at 199.701 kb on + strand, within Ac3H11_503 at 199.702 kb on - strand, within Ac3H11_503 at 199.702 kb on - strand, within Ac3H11_503 at 199.801 kb on + strand, within Ac3H11_503 at 199.801 kb on + strand, within Ac3H11_503 at 199.801 kb on + strand, within Ac3H11_503 at 199.801 kb on + strand, within Ac3H11_503 at 199.802 kb on - strand, within Ac3H11_503 at 199.802 kb on - strand, within Ac3H11_503 at 199.802 kb on - strand, within Ac3H11_503 at 199.802 kb on - strand, within Ac3H11_503 at 199.802 kb on - strand, within Ac3H11_503 at 199.802 kb on - strand, within Ac3H11_503 at 199.802 kb on - strand, within Ac3H11_503 at 199.802 kb on - strand, within Ac3H11_503 at 199.802 kb on - strand, within Ac3H11_503 at 199.802 kb on - strand, within Ac3H11_503 at 199.808 kb on - strand, within Ac3H11_503 at 199.808 kb on - strand, within Ac3H11_503 at 199.808 kb on - strand, within Ac3H11_503 at 200.113 kb on + strand at 200.113 kb on + strand at 200.113 kb on + strand at 200.114 kb on - strand at 200.114 kb on - strand at 200.191 kb on + strand, within Ac3H11_504 at 200.192 kb on - strand, within Ac3H11_504 at 200.192 kb on - strand, within Ac3H11_504 at 200.398 kb on + strand, within Ac3H11_504 at 200.398 kb on + strand, within Ac3H11_504 at 200.398 kb on + strand, within Ac3H11_504 at 200.399 kb on - strand, within Ac3H11_504 at 200.399 kb on - strand, within Ac3H11_504 at 200.952 kb on + strand at 200.952 kb on + strand at 200.953 kb on - strand at 200.953 kb on - strand at 200.976 kb on + strand at 200.976 kb on + strand at 200.976 kb on + strand at 200.976 kb on + strand at 200.976 kb on + strand at 200.976 kb on + strand at 200.977 kb on - strand at 200.998 kb on - strand at 201.007 kb on + strand at 201.007 kb on + strand at 201.008 kb on - strand at 201.011 kb on + strand at 201.027 kb on + strand at 201.128 kb on + strand, within Ac3H11_505 at 201.128 kb on + strand, within Ac3H11_505 at 201.128 kb on + strand, within Ac3H11_505 at 201.129 kb on - strand, within Ac3H11_505 at 201.188 kb on + strand, within Ac3H11_505 at 201.188 kb on + strand, within Ac3H11_505 at 201.188 kb on + strand, within Ac3H11_505 at 201.188 kb on + strand, within Ac3H11_505 at 201.188 kb on + strand, within Ac3H11_505 at 201.189 kb on - strand, within Ac3H11_505 at 201.189 kb on - strand, within Ac3H11_505 at 201.230 kb on + strand, within Ac3H11_505 at 201.230 kb on + strand, within Ac3H11_505 at 201.231 kb on - strand, within Ac3H11_505 at 201.231 kb on - strand, within Ac3H11_505 at 201.231 kb on - strand, within Ac3H11_505 at 201.326 kb on + strand, within Ac3H11_505 at 201.326 kb on + strand, within Ac3H11_505 at 201.327 kb on - strand, within Ac3H11_505 at 201.831 kb on + strand at 201.831 kb on + strand at 201.831 kb on + strand at 201.871 kb on + strand, within Ac3H11_506 at 201.871 kb on + strand, within Ac3H11_506 at 201.871 kb on + strand, within Ac3H11_506 at 201.871 kb on + strand, within Ac3H11_506 at 201.871 kb on + strand, within Ac3H11_506 at 201.872 kb on - strand, within Ac3H11_506 at 201.872 kb on - strand, within Ac3H11_506 at 201.872 kb on - strand, within Ac3H11_506 at 201.872 kb on - strand, within Ac3H11_506 at 201.872 kb on - strand, within Ac3H11_506 at 201.872 kb on - strand, within Ac3H11_506 at 201.872 kb on - strand, within Ac3H11_506 at 201.875 kb on + strand, within Ac3H11_506 at 201.875 kb on + strand, within Ac3H11_506 at 201.875 kb on + strand, within Ac3H11_506 at 201.875 kb on + strand, within Ac3H11_506 at 201.876 kb on - strand, within Ac3H11_506 at 201.876 kb on - strand, within Ac3H11_506 at 201.876 kb on - strand, within Ac3H11_506 at 201.876 kb on - strand, within Ac3H11_506 at 201.876 kb on - strand, within Ac3H11_506 at 201.876 kb on - strand, within Ac3H11_506 at 201.876 kb on - strand, within Ac3H11_506 at 201.876 kb on - strand, within Ac3H11_506 at 201.876 kb on - strand, within Ac3H11_506 at 201.876 kb on - strand, within Ac3H11_506 at 201.877 kb on + strand, within Ac3H11_506 at 201.877 kb on + strand, within Ac3H11_506 at 201.877 kb on + strand, within Ac3H11_506 at 201.877 kb on + strand, within Ac3H11_506 at 201.877 kb on + strand, within Ac3H11_506 at 201.877 kb on + strand, within Ac3H11_506 at 201.877 kb on + strand, within Ac3H11_506 at 201.877 kb on + strand, within Ac3H11_506 at 201.878 kb on - strand, within Ac3H11_506 at 201.878 kb on - strand, within Ac3H11_506 at 201.878 kb on - strand, within Ac3H11_506 at 201.878 kb on - strand, within Ac3H11_506 at 201.878 kb on - strand, within Ac3H11_506 at 201.878 kb on - strand, within Ac3H11_506
Per-strain Table
Position Strand Gene LocusTag Fraction D-Gluconic Acid (C) remove 199,507 + Ac3H11_503 0.63 +0.6 199,507 + Ac3H11_503 0.63 +0.0 199,529 + Ac3H11_503 0.64 +0.1 199,530 - Ac3H11_503 0.65 +0.4 199,530 - Ac3H11_503 0.65 +1.1 199,621 + Ac3H11_503 0.71 -0.2 199,621 + Ac3H11_503 0.71 +0.3 199,621 + Ac3H11_503 0.71 +0.2 199,621 + Ac3H11_503 0.71 -0.3 199,622 - Ac3H11_503 0.71 -2.7 199,622 - Ac3H11_503 0.71 -1.4 199,622 - Ac3H11_503 0.71 +1.2 199,622 - Ac3H11_503 0.71 +0.1 199,622 - Ac3H11_503 0.71 -1.2 199,622 - Ac3H11_503 0.71 -0.3 199,622 - Ac3H11_503 0.71 -0.1 199,622 - Ac3H11_503 0.71 -0.4 199,682 - Ac3H11_503 0.75 -1.0 199,682 - Ac3H11_503 0.75 +0.4 199,682 - Ac3H11_503 0.75 +0.8 199,682 - Ac3H11_503 0.75 +1.0 199,701 + Ac3H11_503 0.77 +1.8 199,701 + Ac3H11_503 0.77 +1.0 199,701 + Ac3H11_503 0.77 -1.4 199,701 + Ac3H11_503 0.77 +0.1 199,702 - Ac3H11_503 0.77 -0.3 199,702 - Ac3H11_503 0.77 -1.9 199,801 + Ac3H11_503 0.84 -0.4 199,801 + Ac3H11_503 0.84 -0.3 199,801 + Ac3H11_503 0.84 -0.9 199,801 + Ac3H11_503 0.84 -0.6 199,802 - Ac3H11_503 0.84 +0.3 199,802 - Ac3H11_503 0.84 -1.1 199,802 - Ac3H11_503 0.84 -0.5 199,802 - Ac3H11_503 0.84 +1.0 199,802 - Ac3H11_503 0.84 +0.7 199,802 - Ac3H11_503 0.84 +0.0 199,802 - Ac3H11_503 0.84 +0.6 199,802 - Ac3H11_503 0.84 -0.2 199,802 - Ac3H11_503 0.84 -1.4 199,802 - Ac3H11_503 0.84 -0.5 199,808 - Ac3H11_503 0.84 +0.0 199,808 - Ac3H11_503 0.84 +0.1 199,808 - Ac3H11_503 0.84 +0.6 200,113 + +0.0 200,113 + -0.5 200,113 + +0.4 200,114 - +0.7 200,114 - -1.3 200,191 + Ac3H11_504 0.12 -0.6 200,192 - Ac3H11_504 0.12 -1.3 200,192 - Ac3H11_504 0.12 -0.7 200,398 + Ac3H11_504 0.37 +0.0 200,398 + Ac3H11_504 0.37 +0.2 200,398 + Ac3H11_504 0.37 -1.3 200,399 - Ac3H11_504 0.37 -1.3 200,399 - Ac3H11_504 0.37 +0.9 200,952 + +0.8 200,952 + -1.0 200,953 - +0.4 200,953 - +1.0 200,976 + -1.8 200,976 + +0.5 200,976 + +0.2 200,976 + +0.7 200,976 + +1.0 200,976 + +0.4 200,977 - +0.4 200,998 - -1.4 201,007 + -0.1 201,007 + +0.7 201,008 - -0.7 201,011 + -1.6 201,027 + +0.9 201,128 + Ac3H11_505 0.15 -3.2 201,128 + Ac3H11_505 0.15 +1.0 201,128 + Ac3H11_505 0.15 -1.0 201,129 - Ac3H11_505 0.15 -1.3 201,188 + Ac3H11_505 0.25 +0.0 201,188 + Ac3H11_505 0.25 -0.3 201,188 + Ac3H11_505 0.25 -0.8 201,188 + Ac3H11_505 0.25 -3.2 201,188 + Ac3H11_505 0.25 +0.2 201,189 - Ac3H11_505 0.25 -1.9 201,189 - Ac3H11_505 0.25 -1.7 201,230 + Ac3H11_505 0.32 -2.9 201,230 + Ac3H11_505 0.32 -0.4 201,231 - Ac3H11_505 0.32 -1.6 201,231 - Ac3H11_505 0.32 -1.5 201,231 - Ac3H11_505 0.32 +0.0 201,326 + Ac3H11_505 0.48 -0.1 201,326 + Ac3H11_505 0.48 -3.2 201,327 - Ac3H11_505 0.48 -2.8 201,831 + -0.3 201,831 + +1.2 201,831 + -1.3 201,871 + Ac3H11_506 0.11 +0.0 201,871 + Ac3H11_506 0.11 -1.6 201,871 + Ac3H11_506 0.11 -0.1 201,871 + Ac3H11_506 0.11 -1.0 201,871 + Ac3H11_506 0.11 +0.3 201,872 - Ac3H11_506 0.11 -1.0 201,872 - Ac3H11_506 0.11 -0.0 201,872 - Ac3H11_506 0.11 +0.2 201,872 - Ac3H11_506 0.11 -0.2 201,872 - Ac3H11_506 0.11 +0.0 201,872 - Ac3H11_506 0.11 -1.4 201,872 - Ac3H11_506 0.11 +0.1 201,875 + Ac3H11_506 0.12 -0.6 201,875 + Ac3H11_506 0.12 +0.6 201,875 + Ac3H11_506 0.12 +0.2 201,875 + Ac3H11_506 0.12 -0.1 201,876 - Ac3H11_506 0.12 -0.5 201,876 - Ac3H11_506 0.12 +0.6 201,876 - Ac3H11_506 0.12 -0.6 201,876 - Ac3H11_506 0.12 -0.1 201,876 - Ac3H11_506 0.12 +0.4 201,876 - Ac3H11_506 0.12 -2.5 201,876 - Ac3H11_506 0.12 +0.8 201,876 - Ac3H11_506 0.12 +0.1 201,876 - Ac3H11_506 0.12 -0.4 201,876 - Ac3H11_506 0.12 -0.7 201,877 + Ac3H11_506 0.13 +1.5 201,877 + Ac3H11_506 0.13 +1.1 201,877 + Ac3H11_506 0.13 -0.3 201,877 + Ac3H11_506 0.13 +0.9 201,877 + Ac3H11_506 0.13 -1.8 201,877 + Ac3H11_506 0.13 -0.5 201,877 + Ac3H11_506 0.13 +0.8 201,877 + Ac3H11_506 0.13 +0.5 201,878 - Ac3H11_506 0.13 +0.9 201,878 - Ac3H11_506 0.13 -1.5 201,878 - Ac3H11_506 0.13 +1.4 201,878 - Ac3H11_506 0.13 +0.5 201,878 - Ac3H11_506 0.13 -0.2 201,878 - Ac3H11_506 0.13 +0.2
Or see this region's nucleotide sequence