Experiment: D-Gluconic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_481 and Ac3H11_482 are separated by 53 nucleotides Ac3H11_482 and Ac3H11_483 are separated by 55 nucleotides Ac3H11_483 and Ac3H11_484 are separated by 48 nucleotides
Ac3H11_481 - Probable Co/Zn/Cd efflux system membrane fusion protein, at 176,558 to 177,991
_481
Ac3H11_482 - RND multidrug efflux transporter; Acriflavin resistance protein, at 178,045 to 181,206
_482
Ac3H11_483 - Thioredoxin, at 181,262 to 181,594
_483
Ac3H11_484 - Molybdopterin biosynthesis protein MoeA, at 181,643 to 183,010
_484
Position (kb) 178
179
180
181
182 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 177.185 kb on + strand, within Ac3H11_481 at 177.185 kb on + strand, within Ac3H11_481 at 177.236 kb on + strand, within Ac3H11_481 at 177.236 kb on + strand, within Ac3H11_481 at 177.236 kb on + strand, within Ac3H11_481 at 177.236 kb on + strand, within Ac3H11_481 at 177.237 kb on - strand, within Ac3H11_481 at 177.237 kb on - strand, within Ac3H11_481 at 177.237 kb on - strand, within Ac3H11_481 at 177.237 kb on - strand, within Ac3H11_481 at 177.237 kb on - strand, within Ac3H11_481 at 177.329 kb on + strand, within Ac3H11_481 at 177.524 kb on + strand, within Ac3H11_481 at 177.524 kb on + strand, within Ac3H11_481 at 177.524 kb on + strand, within Ac3H11_481 at 177.524 kb on + strand, within Ac3H11_481 at 177.524 kb on + strand, within Ac3H11_481 at 177.525 kb on - strand, within Ac3H11_481 at 177.525 kb on - strand, within Ac3H11_481 at 177.525 kb on - strand, within Ac3H11_481 at 178.196 kb on - strand at 178.574 kb on - strand, within Ac3H11_482 at 178.574 kb on - strand, within Ac3H11_482 at 178.588 kb on + strand, within Ac3H11_482 at 178.588 kb on + strand, within Ac3H11_482 at 178.589 kb on - strand, within Ac3H11_482 at 178.589 kb on - strand, within Ac3H11_482 at 178.589 kb on - strand, within Ac3H11_482 at 178.589 kb on - strand, within Ac3H11_482 at 178.589 kb on - strand, within Ac3H11_482 at 179.044 kb on + strand, within Ac3H11_482 at 179.044 kb on + strand, within Ac3H11_482 at 179.044 kb on + strand, within Ac3H11_482 at 179.044 kb on + strand, within Ac3H11_482 at 179.045 kb on - strand, within Ac3H11_482 at 179.045 kb on - strand, within Ac3H11_482 at 179.045 kb on - strand, within Ac3H11_482 at 179.045 kb on - strand, within Ac3H11_482 at 179.272 kb on + strand, within Ac3H11_482 at 179.272 kb on + strand, within Ac3H11_482 at 179.272 kb on + strand, within Ac3H11_482 at 179.272 kb on + strand, within Ac3H11_482 at 179.273 kb on - strand, within Ac3H11_482 at 179.273 kb on - strand, within Ac3H11_482 at 179.273 kb on - strand, within Ac3H11_482 at 179.273 kb on - strand, within Ac3H11_482 at 179.273 kb on - strand, within Ac3H11_482 at 179.377 kb on + strand, within Ac3H11_482 at 179.377 kb on + strand, within Ac3H11_482 at 179.377 kb on + strand, within Ac3H11_482 at 179.378 kb on - strand, within Ac3H11_482 at 179.378 kb on - strand, within Ac3H11_482 at 179.378 kb on - strand, within Ac3H11_482 at 179.581 kb on + strand, within Ac3H11_482 at 179.581 kb on + strand, within Ac3H11_482 at 179.581 kb on + strand, within Ac3H11_482 at 179.582 kb on - strand, within Ac3H11_482 at 179.582 kb on - strand, within Ac3H11_482 at 179.582 kb on - strand, within Ac3H11_482 at 179.582 kb on - strand, within Ac3H11_482 at 179.867 kb on - strand, within Ac3H11_482 at 179.932 kb on + strand, within Ac3H11_482 at 179.933 kb on - strand, within Ac3H11_482 at 179.933 kb on - strand, within Ac3H11_482 at 180.082 kb on + strand, within Ac3H11_482 at 180.082 kb on + strand, within Ac3H11_482 at 180.082 kb on + strand, within Ac3H11_482 at 180.082 kb on + strand, within Ac3H11_482 at 180.082 kb on + strand, within Ac3H11_482 at 180.082 kb on + strand, within Ac3H11_482 at 180.083 kb on - strand, within Ac3H11_482 at 180.083 kb on - strand, within Ac3H11_482 at 180.083 kb on - strand, within Ac3H11_482 at 180.106 kb on + strand, within Ac3H11_482 at 180.107 kb on - strand, within Ac3H11_482 at 180.107 kb on - strand, within Ac3H11_482 at 180.314 kb on - strand, within Ac3H11_482 at 180.334 kb on + strand, within Ac3H11_482 at 180.334 kb on + strand, within Ac3H11_482 at 180.334 kb on + strand, within Ac3H11_482 at 180.334 kb on + strand, within Ac3H11_482 at 180.335 kb on - strand, within Ac3H11_482 at 180.397 kb on + strand, within Ac3H11_482 at 180.397 kb on + strand, within Ac3H11_482 at 180.397 kb on + strand, within Ac3H11_482 at 180.397 kb on + strand, within Ac3H11_482 at 180.397 kb on + strand, within Ac3H11_482 at 180.397 kb on + strand, within Ac3H11_482 at 180.397 kb on + strand, within Ac3H11_482 at 180.397 kb on + strand, within Ac3H11_482 at 180.397 kb on + strand, within Ac3H11_482 at 180.398 kb on - strand, within Ac3H11_482 at 180.398 kb on - strand, within Ac3H11_482 at 180.398 kb on - strand, within Ac3H11_482 at 180.398 kb on - strand, within Ac3H11_482 at 180.398 kb on - strand, within Ac3H11_482 at 180.532 kb on + strand, within Ac3H11_482 at 180.533 kb on - strand, within Ac3H11_482 at 180.533 kb on - strand, within Ac3H11_482 at 180.595 kb on + strand, within Ac3H11_482 at 180.595 kb on + strand, within Ac3H11_482 at 180.808 kb on + strand, within Ac3H11_482 at 180.951 kb on + strand at 180.951 kb on + strand at 180.951 kb on + strand at 180.952 kb on - strand at 180.952 kb on - strand at 180.952 kb on - strand at 181.059 kb on + strand at 181.059 kb on + strand at 181.060 kb on - strand at 181.060 kb on - strand at 181.060 kb on - strand at 181.060 kb on - strand at 181.060 kb on - strand at 181.105 kb on + strand at 181.105 kb on + strand at 181.105 kb on + strand at 181.105 kb on + strand at 181.105 kb on + strand at 181.105 kb on + strand at 181.105 kb on + strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.106 kb on - strand at 181.192 kb on + strand at 181.192 kb on + strand at 181.192 kb on + strand at 181.192 kb on + strand at 181.192 kb on + strand at 181.192 kb on + strand at 181.193 kb on - strand at 181.193 kb on - strand at 181.193 kb on - strand at 181.193 kb on - strand at 181.193 kb on - strand at 181.204 kb on + strand at 181.204 kb on + strand at 181.205 kb on - strand at 181.205 kb on - strand at 181.223 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.249 kb on + strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.250 kb on - strand at 181.252 kb on + strand at 181.253 kb on - strand at 181.253 kb on - strand at 181.322 kb on + strand, within Ac3H11_483 at 181.587 kb on + strand at 181.594 kb on + strand at 181.595 kb on - strand at 181.595 kb on - strand at 181.595 kb on - strand at 181.595 kb on - strand at 181.827 kb on + strand, within Ac3H11_484 at 181.827 kb on + strand, within Ac3H11_484 at 181.827 kb on + strand, within Ac3H11_484 at 181.828 kb on - strand, within Ac3H11_484 at 181.931 kb on + strand, within Ac3H11_484 at 181.931 kb on + strand, within Ac3H11_484 at 181.931 kb on + strand, within Ac3H11_484 at 181.931 kb on + strand, within Ac3H11_484 at 181.932 kb on - strand, within Ac3H11_484 at 181.932 kb on - strand, within Ac3H11_484 at 182.026 kb on + strand, within Ac3H11_484 at 182.029 kb on - strand, within Ac3H11_484
Per-strain Table
Position Strand Gene LocusTag Fraction D-Gluconic Acid (C) remove 177,185 + Ac3H11_481 0.44 -0.4 177,185 + Ac3H11_481 0.44 -0.0 177,236 + Ac3H11_481 0.47 -0.2 177,236 + Ac3H11_481 0.47 +1.6 177,236 + Ac3H11_481 0.47 -0.4 177,236 + Ac3H11_481 0.47 -0.3 177,237 - Ac3H11_481 0.47 -0.5 177,237 - Ac3H11_481 0.47 +0.2 177,237 - Ac3H11_481 0.47 -0.1 177,237 - Ac3H11_481 0.47 +0.9 177,237 - Ac3H11_481 0.47 -0.9 177,329 + Ac3H11_481 0.54 -0.3 177,524 + Ac3H11_481 0.67 +1.2 177,524 + Ac3H11_481 0.67 -1.7 177,524 + Ac3H11_481 0.67 +3.8 177,524 + Ac3H11_481 0.67 -2.0 177,524 + Ac3H11_481 0.67 +1.9 177,525 - Ac3H11_481 0.67 +0.8 177,525 - Ac3H11_481 0.67 -2.4 177,525 - Ac3H11_481 0.67 -0.0 178,196 - +1.5 178,574 - Ac3H11_482 0.17 +0.4 178,574 - Ac3H11_482 0.17 -0.7 178,588 + Ac3H11_482 0.17 -0.3 178,588 + Ac3H11_482 0.17 -1.0 178,589 - Ac3H11_482 0.17 +1.2 178,589 - Ac3H11_482 0.17 +0.7 178,589 - Ac3H11_482 0.17 -1.3 178,589 - Ac3H11_482 0.17 -0.3 178,589 - Ac3H11_482 0.17 -0.3 179,044 + Ac3H11_482 0.32 +1.2 179,044 + Ac3H11_482 0.32 +0.6 179,044 + Ac3H11_482 0.32 -0.0 179,044 + Ac3H11_482 0.32 +0.2 179,045 - Ac3H11_482 0.32 -0.9 179,045 - Ac3H11_482 0.32 +1.1 179,045 - Ac3H11_482 0.32 +0.3 179,045 - Ac3H11_482 0.32 -0.9 179,272 + Ac3H11_482 0.39 -0.4 179,272 + Ac3H11_482 0.39 -0.5 179,272 + Ac3H11_482 0.39 -0.0 179,272 + Ac3H11_482 0.39 -0.4 179,273 - Ac3H11_482 0.39 +0.6 179,273 - Ac3H11_482 0.39 -2.0 179,273 - Ac3H11_482 0.39 +0.4 179,273 - Ac3H11_482 0.39 +0.8 179,273 - Ac3H11_482 0.39 +1.0 179,377 + Ac3H11_482 0.42 +0.1 179,377 + Ac3H11_482 0.42 -1.2 179,377 + Ac3H11_482 0.42 -1.7 179,378 - Ac3H11_482 0.42 -0.9 179,378 - Ac3H11_482 0.42 -0.3 179,378 - Ac3H11_482 0.42 +0.3 179,581 + Ac3H11_482 0.49 +0.4 179,581 + Ac3H11_482 0.49 -0.1 179,581 + Ac3H11_482 0.49 +2.0 179,582 - Ac3H11_482 0.49 +1.1 179,582 - Ac3H11_482 0.49 +1.0 179,582 - Ac3H11_482 0.49 +0.2 179,582 - Ac3H11_482 0.49 -1.4 179,867 - Ac3H11_482 0.58 +1.8 179,932 + Ac3H11_482 0.60 -1.7 179,933 - Ac3H11_482 0.60 +0.8 179,933 - Ac3H11_482 0.60 +1.8 180,082 + Ac3H11_482 0.64 +0.0 180,082 + Ac3H11_482 0.64 +2.0 180,082 + Ac3H11_482 0.64 -0.2 180,082 + Ac3H11_482 0.64 +0.5 180,082 + Ac3H11_482 0.64 -1.2 180,082 + Ac3H11_482 0.64 -0.3 180,083 - Ac3H11_482 0.64 +1.5 180,083 - Ac3H11_482 0.64 +1.3 180,083 - Ac3H11_482 0.64 -2.0 180,106 + Ac3H11_482 0.65 -1.0 180,107 - Ac3H11_482 0.65 +0.1 180,107 - Ac3H11_482 0.65 -2.2 180,314 - Ac3H11_482 0.72 +1.1 180,334 + Ac3H11_482 0.72 -0.4 180,334 + Ac3H11_482 0.72 -0.2 180,334 + Ac3H11_482 0.72 +0.3 180,334 + Ac3H11_482 0.72 -1.7 180,335 - Ac3H11_482 0.72 -2.4 180,397 + Ac3H11_482 0.74 +0.8 180,397 + Ac3H11_482 0.74 -1.1 180,397 + Ac3H11_482 0.74 -0.5 180,397 + Ac3H11_482 0.74 -0.6 180,397 + Ac3H11_482 0.74 -0.2 180,397 + Ac3H11_482 0.74 +1.4 180,397 + Ac3H11_482 0.74 +0.6 180,397 + Ac3H11_482 0.74 -0.3 180,397 + Ac3H11_482 0.74 -1.0 180,398 - Ac3H11_482 0.74 +0.9 180,398 - Ac3H11_482 0.74 +0.1 180,398 - Ac3H11_482 0.74 -0.3 180,398 - Ac3H11_482 0.74 +1.3 180,398 - Ac3H11_482 0.74 -0.4 180,532 + Ac3H11_482 0.79 +0.3 180,533 - Ac3H11_482 0.79 +3.3 180,533 - Ac3H11_482 0.79 +0.4 180,595 + Ac3H11_482 0.81 +0.1 180,595 + Ac3H11_482 0.81 -1.3 180,808 + Ac3H11_482 0.87 +0.3 180,951 + +0.0 180,951 + -0.4 180,951 + -0.5 180,952 - -1.9 180,952 - -1.0 180,952 - -0.6 181,059 + -1.5 181,059 + -1.4 181,060 - +1.3 181,060 - -2.6 181,060 - -0.2 181,060 - +1.1 181,060 - +1.3 181,105 + -0.2 181,105 + +0.2 181,105 + +0.6 181,105 + -0.1 181,105 + +0.5 181,105 + +0.2 181,105 + +0.7 181,106 - +0.9 181,106 - -0.5 181,106 - -0.6 181,106 - -1.2 181,106 - -0.6 181,106 - +0.5 181,106 - +0.1 181,106 - +0.7 181,106 - +1.4 181,106 - -1.4 181,106 - +0.0 181,106 - -1.0 181,106 - +0.9 181,106 - -0.5 181,106 - +0.9 181,106 - -0.1 181,192 + -0.2 181,192 + -0.0 181,192 + -1.2 181,192 + -0.5 181,192 + -0.5 181,192 + -0.3 181,193 - -0.6 181,193 - -0.1 181,193 - -0.4 181,193 - -1.0 181,193 - +1.0 181,204 + -0.2 181,204 + +0.3 181,205 - +0.9 181,205 - -0.9 181,223 + -0.4 181,249 + +0.2 181,249 + -0.9 181,249 + +0.6 181,249 + +0.7 181,249 + +1.3 181,249 + +0.9 181,249 + -1.3 181,249 + -1.0 181,249 + +0.3 181,250 - +0.9 181,250 - -0.4 181,250 - +0.2 181,250 - -0.8 181,250 - -1.2 181,250 - +1.2 181,250 - +0.1 181,250 - +1.6 181,250 - -0.5 181,250 - -0.2 181,250 - -0.1 181,250 - -0.5 181,250 - -0.4 181,252 + -1.5 181,253 - +0.2 181,253 - +0.1 181,322 + Ac3H11_483 0.18 +0.8 181,587 + +0.9 181,594 + -0.4 181,595 - -1.2 181,595 - -1.4 181,595 - +0.4 181,595 - -0.4 181,827 + Ac3H11_484 0.13 -0.1 181,827 + Ac3H11_484 0.13 -0.1 181,827 + Ac3H11_484 0.13 -0.5 181,828 - Ac3H11_484 0.14 +1.3 181,931 + Ac3H11_484 0.21 -0.2 181,931 + Ac3H11_484 0.21 -0.5 181,931 + Ac3H11_484 0.21 +0.2 181,931 + Ac3H11_484 0.21 +0.0 181,932 - Ac3H11_484 0.21 +0.2 181,932 - Ac3H11_484 0.21 +0.7 182,026 + Ac3H11_484 0.28 +0.1 182,029 - Ac3H11_484 0.28 +0.2
Or see this region's nucleotide sequence