Experiment: D-Gluconic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4657 and Ac3H11_4658 are separated by 193 nucleotides Ac3H11_4658 and Ac3H11_4659 are separated by 128 nucleotides
Ac3H11_4657 - Enoyl-CoA hydratase (EC 4.2.1.17), at 263,382 to 264,200
_4657
Ac3H11_4658 - 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157), at 264,394 to 265,242
_4658
Ac3H11_4659 - Choline dehydrogenase (EC 1.1.99.1), at 265,371 to 266,960
_4659
Position (kb) 264
265
266 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 263.903 kb on - strand, within Ac3H11_4657 at 263.956 kb on + strand, within Ac3H11_4657 at 264.055 kb on + strand, within Ac3H11_4657 at 264.055 kb on + strand, within Ac3H11_4657 at 264.055 kb on + strand, within Ac3H11_4657 at 264.055 kb on + strand, within Ac3H11_4657 at 264.056 kb on - strand, within Ac3H11_4657 at 264.056 kb on - strand, within Ac3H11_4657 at 264.056 kb on - strand, within Ac3H11_4657 at 264.119 kb on + strand at 264.236 kb on + strand at 264.283 kb on + strand at 264.283 kb on + strand at 264.283 kb on + strand at 264.283 kb on + strand at 264.398 kb on + strand at 264.398 kb on + strand at 264.398 kb on + strand at 264.398 kb on + strand at 264.398 kb on + strand at 264.398 kb on + strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.404 kb on + strand at 264.404 kb on + strand at 264.404 kb on + strand at 264.404 kb on + strand at 264.404 kb on + strand at 264.404 kb on + strand at 264.405 kb on - strand at 264.405 kb on - strand at 264.405 kb on - strand at 264.405 kb on - strand at 264.405 kb on - strand at 264.405 kb on - strand at 264.405 kb on - strand at 264.405 kb on - strand at 264.405 kb on - strand at 264.405 kb on - strand at 264.477 kb on - strand at 264.503 kb on + strand, within Ac3H11_4658 at 264.503 kb on + strand, within Ac3H11_4658 at 264.503 kb on + strand, within Ac3H11_4658 at 264.503 kb on + strand, within Ac3H11_4658 at 264.504 kb on - strand, within Ac3H11_4658 at 264.504 kb on - strand, within Ac3H11_4658 at 264.504 kb on - strand, within Ac3H11_4658 at 264.504 kb on - strand, within Ac3H11_4658 at 264.504 kb on - strand, within Ac3H11_4658 at 264.504 kb on - strand, within Ac3H11_4658 at 264.504 kb on - strand, within Ac3H11_4658 at 264.504 kb on - strand, within Ac3H11_4658 at 264.962 kb on + strand, within Ac3H11_4658 at 264.962 kb on + strand, within Ac3H11_4658 at 264.962 kb on + strand, within Ac3H11_4658 at 265.143 kb on + strand, within Ac3H11_4658 at 265.143 kb on + strand, within Ac3H11_4658 at 265.143 kb on + strand, within Ac3H11_4658 at 265.144 kb on - strand, within Ac3H11_4658 at 265.144 kb on - strand, within Ac3H11_4658 at 265.144 kb on - strand, within Ac3H11_4658 at 265.144 kb on - strand, within Ac3H11_4658 at 265.226 kb on - strand at 265.226 kb on - strand at 265.242 kb on + strand at 265.242 kb on + strand at 265.244 kb on + strand at 265.244 kb on + strand at 265.244 kb on + strand at 265.244 kb on + strand at 265.244 kb on + strand at 265.244 kb on + strand at 265.244 kb on + strand at 265.244 kb on + strand at 265.245 kb on - strand at 265.245 kb on - strand at 265.245 kb on - strand at 265.245 kb on - strand at 265.245 kb on - strand at 265.245 kb on - strand at 265.245 kb on - strand at 265.245 kb on - strand at 265.245 kb on - strand at 265.284 kb on + strand at 265.285 kb on - strand at 265.285 kb on - strand at 265.380 kb on + strand at 265.380 kb on + strand at 265.380 kb on + strand at 265.381 kb on - strand at 265.381 kb on - strand at 265.381 kb on - strand at 265.381 kb on - strand at 265.381 kb on - strand at 265.647 kb on + strand, within Ac3H11_4659 at 265.647 kb on + strand, within Ac3H11_4659 at 265.647 kb on + strand, within Ac3H11_4659 at 265.648 kb on - strand, within Ac3H11_4659 at 265.648 kb on - strand, within Ac3H11_4659 at 265.648 kb on - strand, within Ac3H11_4659 at 265.648 kb on - strand, within Ac3H11_4659 at 265.671 kb on + strand, within Ac3H11_4659 at 265.671 kb on + strand, within Ac3H11_4659 at 265.728 kb on + strand, within Ac3H11_4659 at 265.729 kb on - strand, within Ac3H11_4659 at 265.914 kb on + strand, within Ac3H11_4659 at 265.914 kb on + strand, within Ac3H11_4659 at 265.915 kb on - strand, within Ac3H11_4659 at 265.962 kb on + strand, within Ac3H11_4659 at 265.962 kb on + strand, within Ac3H11_4659 at 265.962 kb on + strand, within Ac3H11_4659 at 265.963 kb on - strand, within Ac3H11_4659 at 265.963 kb on - strand, within Ac3H11_4659 at 265.963 kb on - strand, within Ac3H11_4659 at 266.061 kb on + strand, within Ac3H11_4659 at 266.061 kb on + strand, within Ac3H11_4659 at 266.061 kb on + strand, within Ac3H11_4659
Per-strain Table
Position Strand Gene LocusTag Fraction D-Gluconic Acid (C) remove 263,903 - Ac3H11_4657 0.64 +0.4 263,956 + Ac3H11_4657 0.70 -1.2 264,055 + Ac3H11_4657 0.82 -1.3 264,055 + Ac3H11_4657 0.82 -1.3 264,055 + Ac3H11_4657 0.82 -1.1 264,055 + Ac3H11_4657 0.82 +1.0 264,056 - Ac3H11_4657 0.82 +2.0 264,056 - Ac3H11_4657 0.82 -2.3 264,056 - Ac3H11_4657 0.82 +0.2 264,119 + -2.3 264,236 + +0.8 264,283 + +0.7 264,283 + -0.5 264,283 + -0.1 264,283 + +1.6 264,398 + -0.0 264,398 + +0.9 264,398 + -1.1 264,398 + -1.8 264,398 + -0.1 264,398 + -1.5 264,399 - +0.9 264,399 - -1.0 264,399 - -1.0 264,399 - +0.7 264,399 - +0.6 264,399 - +0.7 264,399 - -0.8 264,399 - +1.7 264,399 - +0.1 264,399 - +0.6 264,399 - -1.5 264,399 - -0.2 264,399 - +0.2 264,399 - +0.1 264,399 - +0.8 264,399 - +0.1 264,399 - -0.6 264,402 + +0.3 264,402 + +0.8 264,402 + -0.0 264,402 + -0.3 264,402 + -0.3 264,402 + +0.7 264,402 + -0.1 264,402 + -1.1 264,402 + -0.0 264,402 + -0.3 264,402 + -0.8 264,402 + +0.5 264,402 + -0.8 264,402 + -1.4 264,402 + +0.4 264,402 + -0.1 264,402 + -1.8 264,402 + +0.2 264,402 + -0.0 264,402 + +1.5 264,402 + +0.2 264,402 + -1.5 264,402 + +0.8 264,402 + -0.4 264,402 + -1.9 264,402 + -0.4 264,402 + +0.2 264,403 - -0.3 264,403 - +0.6 264,403 - +0.4 264,403 - +0.6 264,403 - +0.1 264,403 - -0.1 264,403 - +0.3 264,403 - -1.1 264,403 - +0.7 264,403 - -1.4 264,403 - +0.8 264,403 - -0.1 264,403 - -0.4 264,403 - +0.2 264,403 - -0.4 264,403 - +0.0 264,403 - -1.0 264,403 - -0.3 264,403 - +1.7 264,403 - +0.5 264,403 - +1.4 264,403 - +0.1 264,404 + -0.9 264,404 + +0.3 264,404 + -0.5 264,404 + -0.1 264,404 + +0.2 264,404 + -0.1 264,405 - -2.4 264,405 - +0.2 264,405 - -0.3 264,405 - -1.2 264,405 - +0.4 264,405 - -1.0 264,405 - -1.2 264,405 - +1.0 264,405 - -0.5 264,405 - -1.4 264,477 - -1.3 264,503 + Ac3H11_4658 0.13 +0.2 264,503 + Ac3H11_4658 0.13 -0.2 264,503 + Ac3H11_4658 0.13 -0.4 264,503 + Ac3H11_4658 0.13 -0.1 264,504 - Ac3H11_4658 0.13 -0.2 264,504 - Ac3H11_4658 0.13 +0.1 264,504 - Ac3H11_4658 0.13 +1.4 264,504 - Ac3H11_4658 0.13 -0.0 264,504 - Ac3H11_4658 0.13 +1.0 264,504 - Ac3H11_4658 0.13 -0.2 264,504 - Ac3H11_4658 0.13 +1.5 264,504 - Ac3H11_4658 0.13 +2.1 264,962 + Ac3H11_4658 0.67 -0.7 264,962 + Ac3H11_4658 0.67 +1.2 264,962 + Ac3H11_4658 0.67 +0.4 265,143 + Ac3H11_4658 0.88 -1.0 265,143 + Ac3H11_4658 0.88 -0.5 265,143 + Ac3H11_4658 0.88 -0.5 265,144 - Ac3H11_4658 0.88 -0.6 265,144 - Ac3H11_4658 0.88 +0.4 265,144 - Ac3H11_4658 0.88 -0.9 265,144 - Ac3H11_4658 0.88 +0.9 265,226 - +2.1 265,226 - +2.3 265,242 + +0.4 265,242 + +0.3 265,244 + +0.1 265,244 + +0.4 265,244 + +0.3 265,244 + -1.5 265,244 + -0.4 265,244 + -0.8 265,244 + -0.2 265,244 + +0.2 265,245 - +0.1 265,245 - -0.1 265,245 - +1.7 265,245 - +0.6 265,245 - +0.2 265,245 - +0.3 265,245 - -0.4 265,245 - -0.2 265,245 - +0.1 265,284 + +0.4 265,285 - +0.5 265,285 - +0.1 265,380 + -0.3 265,380 + -1.8 265,380 + -2.5 265,381 - +0.3 265,381 - +0.1 265,381 - -0.5 265,381 - +0.6 265,381 - -1.1 265,647 + Ac3H11_4659 0.17 +0.5 265,647 + Ac3H11_4659 0.17 +1.2 265,647 + Ac3H11_4659 0.17 +0.2 265,648 - Ac3H11_4659 0.17 -0.4 265,648 - Ac3H11_4659 0.17 +0.4 265,648 - Ac3H11_4659 0.17 -0.1 265,648 - Ac3H11_4659 0.17 +0.1 265,671 + Ac3H11_4659 0.19 +0.6 265,671 + Ac3H11_4659 0.19 +1.3 265,728 + Ac3H11_4659 0.22 -0.1 265,729 - Ac3H11_4659 0.23 -0.2 265,914 + Ac3H11_4659 0.34 -0.4 265,914 + Ac3H11_4659 0.34 +1.7 265,915 - Ac3H11_4659 0.34 -0.9 265,962 + Ac3H11_4659 0.37 -0.6 265,962 + Ac3H11_4659 0.37 +1.9 265,962 + Ac3H11_4659 0.37 +0.2 265,963 - Ac3H11_4659 0.37 +0.0 265,963 - Ac3H11_4659 0.37 +0.2 265,963 - Ac3H11_4659 0.37 +1.9 266,061 + Ac3H11_4659 0.43 +3.9 266,061 + Ac3H11_4659 0.43 -0.5 266,061 + Ac3H11_4659 0.43 +0.6
Or see this region's nucleotide sequence