Experiment: D-Gluconic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3754 and Ac3H11_3755 overlap by 4 nucleotides Ac3H11_3755 and Ac3H11_3756 are separated by 320 nucleotides Ac3H11_3756 and Ac3H11_3757 overlap by 4 nucleotides Ac3H11_3757 and Ac3H11_3758 are separated by 35 nucleotides Ac3H11_3758 and Ac3H11_3759 overlap by 4 nucleotides
Ac3H11_3754 - hypothetical protein, at 10,874 to 11,326
_3754
Ac3H11_3755 - hypothetical protein, at 11,323 to 11,568
_3755
Ac3H11_3756 - hypothetical protein, at 11,889 to 12,158
_3756
Ac3H11_3757 - hypothetical protein, at 12,155 to 12,337
_3757
Ac3H11_3758 - hypothetical protein, at 12,373 to 12,921
_3758
Ac3H11_3759 - hypothetical protein, at 12,918 to 13,538
_3759
Position (kb) 11
12
13 Strain fitness (log2 ratio) -1
0
1
2 at 11.575 kb on + strand at 11.804 kb on + strand at 11.969 kb on + strand, within Ac3H11_3756 at 12.258 kb on + strand, within Ac3H11_3757 at 12.258 kb on + strand, within Ac3H11_3757 at 12.359 kb on - strand at 12.555 kb on + strand, within Ac3H11_3758 at 12.555 kb on + strand, within Ac3H11_3758 at 12.702 kb on - strand, within Ac3H11_3758 at 12.702 kb on - strand, within Ac3H11_3758
Per-strain Table
Position Strand Gene LocusTag Fraction D-Gluconic Acid (C) remove 11,575 + -0.7 11,804 + -1.0 11,969 + Ac3H11_3756 0.30 +0.9 12,258 + Ac3H11_3757 0.56 -0.6 12,258 + Ac3H11_3757 0.56 -0.9 12,359 - +1.8 12,555 + Ac3H11_3758 0.33 +0.6 12,555 + Ac3H11_3758 0.33 +0.5 12,702 - Ac3H11_3758 0.60 +0.2 12,702 - Ac3H11_3758 0.60 -1.1
Or see this region's nucleotide sequence