Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25650 and AO353_25655 overlap by 4 nucleotides AO353_25655 and AO353_25660 are separated by 39 nucleotides AO353_25660 and AO353_25665 are separated by 458 nucleotides
AO353_25650: AO353_25650 - amino acid ABC transporter permease, at 5,656,970 to 5,657,680
_25650
AO353_25655: AO353_25655 - amino acid ABC transporter permease, at 5,657,677 to 5,658,438
_25655
AO353_25660: AO353_25660 - ABC transporter substrate-binding protein, at 5,658,478 to 5,659,257
_25660
AO353_25665: AO353_25665 - 3-hydroxy-isobutyryl-CoA hydrolase (EC 3.1.2.4) <small>(from data)</small>, at 5,659,716 to 5,660,822
_25665
Position (kb) 5658
5659
5660 Strain fitness (log2 ratio) -2
-1
0
1 at 5657.490 kb on + strand, within AO353_25650 at 5657.491 kb on - strand, within AO353_25650 at 5657.491 kb on - strand, within AO353_25650 at 5657.491 kb on - strand, within AO353_25650 at 5657.601 kb on - strand, within AO353_25650 at 5657.628 kb on + strand at 5657.628 kb on + strand at 5657.629 kb on - strand at 5657.709 kb on - strand at 5657.735 kb on + strand at 5657.735 kb on + strand at 5657.735 kb on + strand at 5657.735 kb on + strand at 5657.735 kb on + strand at 5657.735 kb on + strand at 5657.736 kb on - strand at 5657.736 kb on - strand at 5657.763 kb on - strand, within AO353_25655 at 5657.948 kb on + strand, within AO353_25655 at 5658.044 kb on + strand, within AO353_25655 at 5658.044 kb on + strand, within AO353_25655 at 5658.044 kb on + strand, within AO353_25655 at 5658.045 kb on - strand, within AO353_25655 at 5658.053 kb on + strand, within AO353_25655 at 5658.053 kb on + strand, within AO353_25655 at 5658.053 kb on + strand, within AO353_25655 at 5658.053 kb on + strand, within AO353_25655 at 5658.053 kb on + strand, within AO353_25655 at 5658.053 kb on + strand, within AO353_25655 at 5658.053 kb on + strand, within AO353_25655 at 5658.053 kb on + strand, within AO353_25655 at 5658.053 kb on + strand, within AO353_25655 at 5658.053 kb on + strand, within AO353_25655 at 5658.053 kb on + strand, within AO353_25655 at 5658.054 kb on - strand, within AO353_25655 at 5658.054 kb on - strand, within AO353_25655 at 5658.054 kb on - strand, within AO353_25655 at 5658.054 kb on - strand, within AO353_25655 at 5658.054 kb on - strand, within AO353_25655 at 5658.057 kb on + strand, within AO353_25655 at 5658.057 kb on + strand, within AO353_25655 at 5658.057 kb on + strand, within AO353_25655 at 5658.057 kb on + strand, within AO353_25655 at 5658.058 kb on - strand, within AO353_25655 at 5658.058 kb on - strand, within AO353_25655 at 5658.058 kb on - strand, within AO353_25655 at 5658.104 kb on + strand, within AO353_25655 at 5658.104 kb on + strand, within AO353_25655 at 5658.104 kb on + strand, within AO353_25655 at 5658.105 kb on - strand, within AO353_25655 at 5658.105 kb on - strand, within AO353_25655 at 5658.105 kb on - strand, within AO353_25655 at 5658.105 kb on - strand, within AO353_25655 at 5658.155 kb on + strand, within AO353_25655 at 5658.155 kb on + strand, within AO353_25655 at 5658.155 kb on + strand, within AO353_25655 at 5658.156 kb on - strand, within AO353_25655 at 5658.209 kb on + strand, within AO353_25655 at 5658.210 kb on - strand, within AO353_25655 at 5658.210 kb on - strand, within AO353_25655 at 5658.210 kb on - strand at 5658.210 kb on - strand, within AO353_25655 at 5658.397 kb on - strand at 5658.488 kb on + strand at 5658.489 kb on - strand at 5658.489 kb on - strand at 5658.489 kb on - strand at 5658.509 kb on + strand at 5658.509 kb on + strand at 5658.509 kb on + strand at 5658.510 kb on - strand at 5658.510 kb on - strand at 5658.510 kb on - strand at 5658.510 kb on - strand at 5658.530 kb on + strand at 5658.530 kb on + strand at 5658.530 kb on + strand at 5658.531 kb on - strand at 5658.531 kb on - strand at 5658.531 kb on - strand at 5658.601 kb on + strand, within AO353_25660 at 5658.601 kb on + strand, within AO353_25660 at 5658.602 kb on - strand, within AO353_25660 at 5658.602 kb on - strand, within AO353_25660 at 5658.738 kb on - strand, within AO353_25660 at 5658.752 kb on + strand, within AO353_25660 at 5658.818 kb on + strand, within AO353_25660 at 5658.929 kb on + strand, within AO353_25660 at 5658.930 kb on - strand, within AO353_25660 at 5658.930 kb on - strand, within AO353_25660 at 5659.263 kb on + strand at 5659.263 kb on + strand at 5659.263 kb on + strand at 5659.263 kb on + strand at 5659.263 kb on + strand at 5659.263 kb on + strand at 5659.264 kb on - strand at 5659.264 kb on - strand at 5659.264 kb on - strand at 5659.264 kb on - strand at 5659.264 kb on - strand at 5659.264 kb on - strand at 5659.285 kb on + strand at 5659.367 kb on + strand at 5659.367 kb on + strand at 5659.367 kb on + strand at 5659.367 kb on + strand at 5659.368 kb on - strand at 5659.556 kb on - strand at 5659.559 kb on - strand at 5659.591 kb on - strand at 5659.591 kb on - strand at 5659.593 kb on + strand at 5659.620 kb on + strand at 5659.620 kb on + strand at 5659.620 kb on + strand at 5659.620 kb on + strand at 5659.621 kb on - strand at 5659.621 kb on - strand at 5659.621 kb on - strand at 5659.621 kb on - strand at 5659.621 kb on - strand at 5659.621 kb on - strand at 5659.632 kb on - strand at 5659.685 kb on + strand at 5659.686 kb on - strand at 5659.686 kb on - strand at 5659.686 kb on - strand at 5659.697 kb on + strand at 5659.698 kb on - strand at 5659.698 kb on - strand at 5659.698 kb on - strand at 5659.698 kb on - strand at 5659.711 kb on + strand at 5659.711 kb on + strand at 5659.711 kb on + strand at 5660.025 kb on + strand, within AO353_25665 at 5660.026 kb on - strand, within AO353_25665 at 5660.181 kb on + strand, within AO353_25665 at 5660.205 kb on + strand, within AO353_25665 at 5660.205 kb on + strand, within AO353_25665 at 5660.205 kb on + strand, within AO353_25665 at 5660.205 kb on + strand, within AO353_25665 at 5660.241 kb on + strand, within AO353_25665 at 5660.241 kb on + strand, within AO353_25665 at 5660.241 kb on + strand, within AO353_25665 at 5660.241 kb on + strand, within AO353_25665 at 5660.241 kb on + strand, within AO353_25665
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 5,657,490 + AO353_25650 0.73 +0.0 5,657,491 - AO353_25650 0.73 +0.4 5,657,491 - AO353_25650 0.73 +0.4 5,657,491 - AO353_25650 0.73 -1.4 5,657,601 - AO353_25650 0.89 +0.3 5,657,628 + -1.0 5,657,628 + -1.2 5,657,629 - -0.2 5,657,709 - -0.4 5,657,735 + -0.4 5,657,735 + -0.6 5,657,735 + +0.0 5,657,735 + -0.2 5,657,735 + +0.4 5,657,735 + -1.4 5,657,736 - +0.3 5,657,736 - -0.9 5,657,763 - AO353_25655 0.11 +0.2 5,657,948 + AO353_25655 0.36 -0.5 5,658,044 + AO353_25655 0.48 +0.2 5,658,044 + AO353_25655 0.48 +0.4 5,658,044 + AO353_25655 0.48 -0.7 5,658,045 - AO353_25655 0.48 -0.4 5,658,053 + AO353_25655 0.49 +0.3 5,658,053 + AO353_25655 0.49 -0.2 5,658,053 + AO353_25655 0.49 +0.0 5,658,053 + AO353_25655 0.49 +0.9 5,658,053 + AO353_25655 0.49 -0.5 5,658,053 + AO353_25655 0.49 -0.7 5,658,053 + AO353_25655 0.49 -0.9 5,658,053 + AO353_25655 0.49 -2.1 5,658,053 + AO353_25655 0.49 -2.3 5,658,053 + AO353_25655 0.49 -2.2 5,658,053 + AO353_25655 0.49 -0.1 5,658,054 - AO353_25655 0.49 -0.5 5,658,054 - AO353_25655 0.49 +0.4 5,658,054 - AO353_25655 0.49 -0.6 5,658,054 - AO353_25655 0.49 +0.8 5,658,054 - AO353_25655 0.49 -0.5 5,658,057 + AO353_25655 0.50 +0.6 5,658,057 + AO353_25655 0.50 -0.6 5,658,057 + AO353_25655 0.50 -0.7 5,658,057 + AO353_25655 0.50 +0.8 5,658,058 - AO353_25655 0.50 +0.9 5,658,058 - AO353_25655 0.50 -0.9 5,658,058 - AO353_25655 0.50 +0.6 5,658,104 + AO353_25655 0.56 +0.1 5,658,104 + AO353_25655 0.56 -1.7 5,658,104 + AO353_25655 0.56 +1.0 5,658,105 - AO353_25655 0.56 -0.2 5,658,105 - AO353_25655 0.56 +0.3 5,658,105 - AO353_25655 0.56 +0.6 5,658,105 - AO353_25655 0.56 -0.6 5,658,155 + AO353_25655 0.63 -0.2 5,658,155 + AO353_25655 0.63 +0.1 5,658,155 + AO353_25655 0.63 +0.4 5,658,156 - AO353_25655 0.63 +0.4 5,658,209 + AO353_25655 0.70 -1.0 5,658,210 - AO353_25655 0.70 +0.0 5,658,210 - AO353_25655 0.70 -0.1 5,658,210 - +0.2 5,658,210 - AO353_25655 0.70 +1.6 5,658,397 - -0.2 5,658,488 + -0.6 5,658,489 - -0.8 5,658,489 - -0.3 5,658,489 - +0.2 5,658,509 + -0.4 5,658,509 + -0.2 5,658,509 + +0.0 5,658,510 - -0.2 5,658,510 - -0.2 5,658,510 - -0.2 5,658,510 - -1.6 5,658,530 + +0.0 5,658,530 + +0.6 5,658,530 + +0.1 5,658,531 - -1.0 5,658,531 - +0.3 5,658,531 - -1.5 5,658,601 + AO353_25660 0.16 -1.0 5,658,601 + AO353_25660 0.16 +1.0 5,658,602 - AO353_25660 0.16 -0.4 5,658,602 - AO353_25660 0.16 -0.3 5,658,738 - AO353_25660 0.33 +0.6 5,658,752 + AO353_25660 0.35 +0.9 5,658,818 + AO353_25660 0.44 -0.2 5,658,929 + AO353_25660 0.58 -0.2 5,658,930 - AO353_25660 0.58 +0.1 5,658,930 - AO353_25660 0.58 +0.6 5,659,263 + +0.6 5,659,263 + -2.2 5,659,263 + -0.3 5,659,263 + -0.7 5,659,263 + +1.1 5,659,263 + -0.6 5,659,264 - -1.0 5,659,264 - +0.3 5,659,264 - +0.6 5,659,264 - -2.2 5,659,264 - +0.6 5,659,264 - +0.3 5,659,285 + +1.6 5,659,367 + +0.6 5,659,367 + +1.1 5,659,367 + -1.3 5,659,367 + +1.3 5,659,368 - -0.7 5,659,556 - +0.3 5,659,559 - -1.7 5,659,591 - -1.3 5,659,591 - +0.9 5,659,593 + +0.9 5,659,620 + +0.2 5,659,620 + +0.3 5,659,620 + -1.6 5,659,620 + -0.7 5,659,621 - +0.1 5,659,621 - +0.0 5,659,621 - +0.3 5,659,621 - -0.2 5,659,621 - -0.2 5,659,621 - +0.9 5,659,632 - +0.2 5,659,685 + -0.4 5,659,686 - -0.2 5,659,686 - +0.0 5,659,686 - -0.2 5,659,697 + -0.4 5,659,698 - +0.6 5,659,698 - +0.0 5,659,698 - +0.0 5,659,698 - -0.6 5,659,711 + -1.2 5,659,711 + +0.3 5,659,711 + -0.4 5,660,025 + AO353_25665 0.28 +0.6 5,660,026 - AO353_25665 0.28 +0.4 5,660,181 + AO353_25665 0.42 -0.7 5,660,205 + AO353_25665 0.44 +1.0 5,660,205 + AO353_25665 0.44 +0.4 5,660,205 + AO353_25665 0.44 +0.4 5,660,205 + AO353_25665 0.44 -0.6 5,660,241 + AO353_25665 0.47 +0.7 5,660,241 + AO353_25665 0.47 -0.4 5,660,241 + AO353_25665 0.47 -0.1 5,660,241 + AO353_25665 0.47 -0.2 5,660,241 + AO353_25665 0.47 -0.3
Or see this region's nucleotide sequence