Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22995 and AO353_23000 are separated by 344 nucleotides AO353_23000 and AO353_23005 are separated by 29 nucleotides AO353_23005 and AO353_23010 are separated by 120 nucleotides
AO353_22995: AO353_22995 - UDP pyrophosphate phosphatase, at 5,048,467 to 5,049,339
_22995
AO353_23000: AO353_23000 - hypothetical protein, at 5,049,684 to 5,050,451
_23000
AO353_23005: AO353_23005 - hypothetical protein, at 5,050,481 to 5,050,918
_23005
AO353_23010: AO353_23010 - XRE family transcriptional regulator, at 5,051,039 to 5,051,704
_23010
Position (kb) 5049
5050
5051 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5048.928 kb on + strand, within AO353_22995 at 5048.928 kb on + strand, within AO353_22995 at 5048.929 kb on - strand, within AO353_22995 at 5048.968 kb on - strand, within AO353_22995 at 5049.059 kb on + strand, within AO353_22995 at 5049.059 kb on + strand, within AO353_22995 at 5049.059 kb on + strand, within AO353_22995 at 5049.060 kb on - strand, within AO353_22995 at 5049.060 kb on - strand, within AO353_22995 at 5049.082 kb on + strand, within AO353_22995 at 5049.082 kb on + strand, within AO353_22995 at 5049.082 kb on + strand, within AO353_22995 at 5049.082 kb on + strand, within AO353_22995 at 5049.083 kb on - strand, within AO353_22995 at 5049.106 kb on + strand, within AO353_22995 at 5049.106 kb on + strand, within AO353_22995 at 5049.122 kb on + strand, within AO353_22995 at 5049.122 kb on + strand, within AO353_22995 at 5049.123 kb on - strand, within AO353_22995 at 5049.123 kb on - strand, within AO353_22995 at 5049.241 kb on + strand, within AO353_22995 at 5049.241 kb on + strand, within AO353_22995 at 5049.241 kb on + strand, within AO353_22995 at 5049.241 kb on + strand, within AO353_22995 at 5049.241 kb on + strand, within AO353_22995 at 5049.242 kb on - strand, within AO353_22995 at 5049.242 kb on - strand, within AO353_22995 at 5049.242 kb on - strand, within AO353_22995 at 5049.325 kb on - strand at 5049.343 kb on - strand at 5049.343 kb on - strand at 5049.343 kb on - strand at 5049.351 kb on + strand at 5049.358 kb on + strand at 5049.358 kb on + strand at 5049.478 kb on + strand at 5049.478 kb on + strand at 5049.478 kb on + strand at 5049.557 kb on + strand at 5049.557 kb on + strand at 5049.577 kb on + strand at 5049.577 kb on + strand at 5049.577 kb on + strand at 5049.577 kb on + strand at 5049.577 kb on + strand at 5049.577 kb on + strand at 5049.577 kb on + strand at 5049.577 kb on + strand at 5049.577 kb on + strand at 5049.578 kb on - strand at 5049.578 kb on - strand at 5049.578 kb on - strand at 5049.578 kb on - strand at 5049.621 kb on + strand at 5049.621 kb on + strand at 5049.621 kb on + strand at 5049.621 kb on + strand at 5049.621 kb on + strand at 5049.621 kb on + strand at 5049.621 kb on + strand at 5049.621 kb on + strand at 5049.621 kb on + strand at 5049.622 kb on - strand at 5049.622 kb on - strand at 5049.622 kb on - strand at 5049.622 kb on - strand at 5049.622 kb on - strand at 5049.635 kb on + strand at 5049.636 kb on - strand at 5049.696 kb on - strand at 5049.716 kb on + strand at 5049.717 kb on - strand at 5049.717 kb on - strand at 5049.767 kb on + strand, within AO353_23000 at 5049.767 kb on + strand at 5049.767 kb on + strand, within AO353_23000 at 5049.768 kb on - strand, within AO353_23000 at 5049.881 kb on + strand, within AO353_23000 at 5049.882 kb on - strand, within AO353_23000 at 5049.882 kb on - strand at 5049.882 kb on - strand, within AO353_23000 at 5049.891 kb on + strand, within AO353_23000 at 5049.906 kb on + strand, within AO353_23000 at 5049.958 kb on + strand, within AO353_23000 at 5049.958 kb on + strand, within AO353_23000 at 5049.958 kb on + strand, within AO353_23000 at 5049.958 kb on + strand, within AO353_23000 at 5049.959 kb on - strand, within AO353_23000 at 5049.959 kb on - strand, within AO353_23000 at 5049.987 kb on + strand, within AO353_23000 at 5049.988 kb on - strand, within AO353_23000 at 5050.003 kb on + strand, within AO353_23000 at 5050.004 kb on - strand, within AO353_23000 at 5050.101 kb on + strand, within AO353_23000 at 5050.101 kb on + strand, within AO353_23000 at 5050.101 kb on + strand, within AO353_23000 at 5050.101 kb on + strand, within AO353_23000 at 5050.102 kb on - strand, within AO353_23000 at 5050.250 kb on + strand, within AO353_23000 at 5050.250 kb on + strand, within AO353_23000 at 5050.250 kb on + strand, within AO353_23000 at 5050.251 kb on - strand, within AO353_23000 at 5050.251 kb on - strand, within AO353_23000 at 5050.251 kb on - strand, within AO353_23000 at 5050.251 kb on - strand, within AO353_23000 at 5050.251 kb on - strand, within AO353_23000 at 5050.251 kb on - strand, within AO353_23000 at 5050.251 kb on - strand, within AO353_23000 at 5050.275 kb on + strand, within AO353_23000 at 5050.276 kb on - strand, within AO353_23000 at 5050.276 kb on - strand, within AO353_23000 at 5050.276 kb on - strand, within AO353_23000 at 5050.276 kb on - strand, within AO353_23000 at 5050.276 kb on - strand at 5050.336 kb on - strand, within AO353_23000 at 5050.336 kb on - strand, within AO353_23000 at 5050.466 kb on + strand at 5050.487 kb on + strand at 5050.487 kb on + strand at 5050.488 kb on - strand at 5050.488 kb on - strand at 5050.488 kb on - strand at 5050.488 kb on - strand at 5050.561 kb on + strand, within AO353_23005 at 5050.562 kb on - strand, within AO353_23005 at 5050.579 kb on + strand, within AO353_23005 at 5050.591 kb on + strand, within AO353_23005 at 5050.591 kb on + strand, within AO353_23005 at 5050.591 kb on + strand, within AO353_23005 at 5050.592 kb on - strand, within AO353_23005 at 5050.592 kb on - strand, within AO353_23005 at 5050.592 kb on - strand, within AO353_23005 at 5050.935 kb on + strand at 5050.935 kb on + strand at 5050.936 kb on - strand at 5050.936 kb on - strand at 5050.994 kb on + strand at 5050.994 kb on + strand at 5050.994 kb on + strand at 5050.994 kb on + strand at 5050.995 kb on - strand at 5051.022 kb on + strand at 5051.022 kb on + strand at 5051.022 kb on + strand at 5051.022 kb on + strand at 5051.022 kb on + strand at 5051.022 kb on + strand at 5051.023 kb on - strand at 5051.023 kb on - strand at 5051.023 kb on - strand at 5051.046 kb on + strand at 5051.049 kb on + strand at 5051.049 kb on + strand at 5051.049 kb on + strand at 5051.049 kb on + strand at 5051.111 kb on + strand, within AO353_23010 at 5051.111 kb on + strand, within AO353_23010 at 5051.112 kb on - strand, within AO353_23010 at 5051.112 kb on - strand, within AO353_23010 at 5051.171 kb on + strand at 5051.171 kb on + strand at 5051.171 kb on + strand, within AO353_23010 at 5051.171 kb on + strand, within AO353_23010 at 5051.172 kb on - strand, within AO353_23010 at 5051.172 kb on - strand, within AO353_23010 at 5051.172 kb on - strand, within AO353_23010 at 5051.172 kb on - strand, within AO353_23010
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 5,048,928 + AO353_22995 0.53 +1.4 5,048,928 + AO353_22995 0.53 +2.3 5,048,929 - AO353_22995 0.53 -0.4 5,048,968 - AO353_22995 0.57 +0.0 5,049,059 + AO353_22995 0.68 -0.1 5,049,059 + AO353_22995 0.68 -0.5 5,049,059 + AO353_22995 0.68 +0.0 5,049,060 - AO353_22995 0.68 +0.7 5,049,060 - AO353_22995 0.68 -0.9 5,049,082 + AO353_22995 0.70 -0.1 5,049,082 + AO353_22995 0.70 +0.7 5,049,082 + AO353_22995 0.70 -0.0 5,049,082 + AO353_22995 0.70 +0.6 5,049,083 - AO353_22995 0.71 +0.1 5,049,106 + AO353_22995 0.73 -0.1 5,049,106 + AO353_22995 0.73 +0.7 5,049,122 + AO353_22995 0.75 +3.3 5,049,122 + AO353_22995 0.75 -0.3 5,049,123 - AO353_22995 0.75 +1.4 5,049,123 - AO353_22995 0.75 +0.2 5,049,241 + AO353_22995 0.89 +0.4 5,049,241 + AO353_22995 0.89 +2.7 5,049,241 + AO353_22995 0.89 -0.3 5,049,241 + AO353_22995 0.89 +0.6 5,049,241 + AO353_22995 0.89 +0.7 5,049,242 - AO353_22995 0.89 -1.5 5,049,242 - AO353_22995 0.89 -0.5 5,049,242 - AO353_22995 0.89 -1.1 5,049,325 - -0.5 5,049,343 - +0.8 5,049,343 - -1.3 5,049,343 - +0.9 5,049,351 + -0.3 5,049,358 + +0.4 5,049,358 + -1.0 5,049,478 + +0.7 5,049,478 + -0.9 5,049,478 + +0.1 5,049,557 + +0.4 5,049,557 + -0.1 5,049,577 + -0.2 5,049,577 + -0.6 5,049,577 + +0.2 5,049,577 + +1.3 5,049,577 + +1.1 5,049,577 + -0.9 5,049,577 + -0.8 5,049,577 + +1.5 5,049,577 + -0.2 5,049,578 - +1.7 5,049,578 - +0.7 5,049,578 - +0.4 5,049,578 - -2.5 5,049,621 + -1.0 5,049,621 + -3.0 5,049,621 + +0.3 5,049,621 + -0.8 5,049,621 + -0.1 5,049,621 + +1.7 5,049,621 + +1.5 5,049,621 + -0.1 5,049,621 + +0.9 5,049,622 - +0.4 5,049,622 - +0.3 5,049,622 - -0.9 5,049,622 - +0.1 5,049,622 - +0.0 5,049,635 + +0.5 5,049,636 - +1.0 5,049,696 - -1.1 5,049,716 + +0.5 5,049,717 - -0.3 5,049,717 - -0.0 5,049,767 + AO353_23000 0.11 +0.9 5,049,767 + +1.7 5,049,767 + AO353_23000 0.11 -2.5 5,049,768 - AO353_23000 0.11 +0.5 5,049,881 + AO353_23000 0.26 +0.9 5,049,882 - AO353_23000 0.26 -0.5 5,049,882 - +1.7 5,049,882 - AO353_23000 0.26 +0.4 5,049,891 + AO353_23000 0.27 -1.2 5,049,906 + AO353_23000 0.29 -0.3 5,049,958 + AO353_23000 0.36 -0.3 5,049,958 + AO353_23000 0.36 -0.7 5,049,958 + AO353_23000 0.36 +0.7 5,049,958 + AO353_23000 0.36 +0.9 5,049,959 - AO353_23000 0.36 +0.1 5,049,959 - AO353_23000 0.36 +1.5 5,049,987 + AO353_23000 0.39 +1.4 5,049,988 - AO353_23000 0.40 +0.1 5,050,003 + AO353_23000 0.42 +1.1 5,050,004 - AO353_23000 0.42 +1.7 5,050,101 + AO353_23000 0.54 +0.4 5,050,101 + AO353_23000 0.54 -0.1 5,050,101 + AO353_23000 0.54 +0.4 5,050,101 + AO353_23000 0.54 -0.6 5,050,102 - AO353_23000 0.54 +1.0 5,050,250 + AO353_23000 0.74 +0.2 5,050,250 + AO353_23000 0.74 -0.2 5,050,250 + AO353_23000 0.74 -0.3 5,050,251 - AO353_23000 0.74 -0.1 5,050,251 - AO353_23000 0.74 +1.2 5,050,251 - AO353_23000 0.74 +0.1 5,050,251 - AO353_23000 0.74 +0.7 5,050,251 - AO353_23000 0.74 -0.3 5,050,251 - AO353_23000 0.74 -0.4 5,050,251 - AO353_23000 0.74 +0.9 5,050,275 + AO353_23000 0.77 +0.5 5,050,276 - AO353_23000 0.77 -0.3 5,050,276 - AO353_23000 0.77 -1.4 5,050,276 - AO353_23000 0.77 +0.8 5,050,276 - AO353_23000 0.77 +0.4 5,050,276 - +0.4 5,050,336 - AO353_23000 0.85 -2.0 5,050,336 - AO353_23000 0.85 +0.3 5,050,466 + +0.4 5,050,487 + -1.2 5,050,487 + -0.1 5,050,488 - -0.6 5,050,488 - -0.9 5,050,488 - -1.1 5,050,488 - -0.1 5,050,561 + AO353_23005 0.18 -0.2 5,050,562 - AO353_23005 0.18 +0.5 5,050,579 + AO353_23005 0.22 +1.1 5,050,591 + AO353_23005 0.25 +0.7 5,050,591 + AO353_23005 0.25 -0.4 5,050,591 + AO353_23005 0.25 -0.9 5,050,592 - AO353_23005 0.25 -0.0 5,050,592 - AO353_23005 0.25 +0.2 5,050,592 - AO353_23005 0.25 -0.1 5,050,935 + -0.5 5,050,935 + -0.7 5,050,936 - +1.1 5,050,936 - -0.4 5,050,994 + -0.4 5,050,994 + -0.0 5,050,994 + -0.3 5,050,994 + -0.7 5,050,995 - -0.7 5,051,022 + +0.1 5,051,022 + +0.7 5,051,022 + -0.1 5,051,022 + +0.6 5,051,022 + +1.1 5,051,022 + +0.4 5,051,023 - -1.2 5,051,023 - -0.8 5,051,023 - -0.9 5,051,046 + -0.3 5,051,049 + -0.9 5,051,049 + -0.2 5,051,049 + -0.1 5,051,049 + +1.0 5,051,111 + AO353_23010 0.11 +0.7 5,051,111 + AO353_23010 0.11 -0.3 5,051,112 - AO353_23010 0.11 -0.3 5,051,112 - AO353_23010 0.11 +0.3 5,051,171 + +0.1 5,051,171 + +0.1 5,051,171 + AO353_23010 0.20 +0.1 5,051,171 + AO353_23010 0.20 -0.5 5,051,172 - AO353_23010 0.20 -0.0 5,051,172 - AO353_23010 0.20 -0.7 5,051,172 - AO353_23010 0.20 -0.1 5,051,172 - AO353_23010 0.20 -0.3
Or see this region's nucleotide sequence