Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS18395 and ABIE51_RS18400 are separated by 77 nucleotides ABIE51_RS18400 and ABIE51_RS18405 are separated by 10 nucleotides ABIE51_RS18405 and ABIE51_RS18410 are separated by 260 nucleotides ABIE51_RS18410 and ABIE51_RS18415 are separated by 413 nucleotides
ABIE51_RS18395: ABIE51_RS18395 - F0F1 ATP synthase subunit C, at 4,013,296 to 4,013,574
_RS18395
ABIE51_RS18400: ABIE51_RS18400 - F0F1 ATP synthase subunit A, at 4,013,652 to 4,014,482
_RS18400
ABIE51_RS18405: ABIE51_RS18405 - hypothetical protein, at 4,014,493 to 4,014,861
_RS18405
ABIE51_RS18410: ABIE51_RS18410 - DUF2061 domain-containing protein, at 4,015,122 to 4,015,340
_RS18410
ABIE51_RS18415: ABIE51_RS18415 - hypothetical protein, at 4,015,754 to 4,016,560
_RS18415
Position (kb)
4014
4015 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4013.612 kb on - strand at 4013.612 kb on - strand at 4013.612 kb on - strand at 4013.612 kb on - strand at 4014.495 kb on - strand at 4014.518 kb on - strand at 4014.916 kb on - strand at 4014.916 kb on - strand at 4014.917 kb on + strand at 4014.918 kb on - strand at 4014.918 kb on - strand at 4014.918 kb on - strand at 4014.930 kb on - strand at 4014.930 kb on - strand at 4015.027 kb on + strand at 4015.028 kb on - strand at 4015.028 kb on - strand at 4015.038 kb on + strand at 4015.039 kb on - strand at 4015.087 kb on + strand at 4015.087 kb on + strand at 4015.087 kb on + strand at 4015.088 kb on - strand at 4015.179 kb on + strand, within ABIE51_RS18410 at 4015.179 kb on + strand, within ABIE51_RS18410 at 4015.179 kb on + strand, within ABIE51_RS18410 at 4015.180 kb on - strand, within ABIE51_RS18410 at 4015.180 kb on - strand, within ABIE51_RS18410 at 4015.449 kb on + strand at 4015.449 kb on + strand at 4015.449 kb on + strand at 4015.449 kb on + strand at 4015.450 kb on - strand at 4015.450 kb on - strand at 4015.450 kb on - strand at 4015.450 kb on - strand at 4015.720 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 4,013,612 - -3.9 4,013,612 - +0.5 4,013,612 - +0.3 4,013,612 - -1.1 4,014,495 - +0.4 4,014,518 - +1.0 4,014,916 - +1.8 4,014,916 - +0.5 4,014,917 + +0.3 4,014,918 - -0.1 4,014,918 - -0.7 4,014,918 - -0.6 4,014,930 - -1.2 4,014,930 - -0.5 4,015,027 + +0.3 4,015,028 - -0.7 4,015,028 - +0.1 4,015,038 + +0.3 4,015,039 - +1.1 4,015,087 + -0.2 4,015,087 + -0.2 4,015,087 + +0.4 4,015,088 - +1.1 4,015,179 + ABIE51_RS18410 0.26 +0.3 4,015,179 + ABIE51_RS18410 0.26 +0.2 4,015,179 + ABIE51_RS18410 0.26 +1.0 4,015,180 - ABIE51_RS18410 0.26 -0.2 4,015,180 - ABIE51_RS18410 0.26 +0.1 4,015,449 + +0.8 4,015,449 + -0.1 4,015,449 + +0.8 4,015,449 + +0.2 4,015,450 - -0.2 4,015,450 - -0.2 4,015,450 - +1.1 4,015,450 - +0.8 4,015,720 + +0.6
Or see this region's nucleotide sequence