Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS09585 and ABIE51_RS09590 are separated by 44 nucleotides ABIE51_RS09590 and ABIE51_RS09595 are separated by 68 nucleotides ABIE51_RS09595 and ABIE51_RS09600 are separated by 85 nucleotides ABIE51_RS09600 and ABIE51_RS09605 are separated by 346 nucleotides
ABIE51_RS09585: ABIE51_RS09585 - hypothetical protein, at 2,065,301 to 2,065,534
_RS09585
ABIE51_RS09590: ABIE51_RS09590 - DUF4142 domain-containing protein, at 2,065,579 to 2,066,259
_RS09590
ABIE51_RS09595: ABIE51_RS09595 - CorA family divalent cation transporter, at 2,066,328 to 2,067,311
_RS09595
ABIE51_RS09600: ABIE51_RS09600 - hypothetical protein, at 2,067,397 to 2,067,651
_RS09600
ABIE51_RS09605: ABIE51_RS09605 - catalase, at 2,067,998 to 2,070,430
_RS09605
Position (kb)
2066
2067
2068 Strain fitness (log2 ratio)
-2
-1
0
1 at 2065.425 kb on - strand, within ABIE51_RS09585 at 2065.554 kb on + strand at 2065.554 kb on + strand at 2065.554 kb on + strand at 2065.555 kb on - strand at 2065.555 kb on - strand at 2065.555 kb on - strand at 2065.555 kb on - strand at 2065.921 kb on + strand, within ABIE51_RS09590 at 2065.922 kb on - strand, within ABIE51_RS09590 at 2065.922 kb on - strand, within ABIE51_RS09590 at 2066.080 kb on + strand, within ABIE51_RS09590 at 2066.081 kb on - strand, within ABIE51_RS09590 at 2066.081 kb on - strand, within ABIE51_RS09590 at 2066.081 kb on - strand, within ABIE51_RS09590 at 2066.083 kb on - strand, within ABIE51_RS09590 at 2066.083 kb on - strand, within ABIE51_RS09590 at 2066.084 kb on + strand, within ABIE51_RS09590 at 2066.084 kb on + strand, within ABIE51_RS09590 at 2066.084 kb on + strand, within ABIE51_RS09590 at 2066.084 kb on + strand, within ABIE51_RS09590 at 2066.084 kb on + strand, within ABIE51_RS09590 at 2066.084 kb on + strand, within ABIE51_RS09590 at 2066.085 kb on - strand, within ABIE51_RS09590 at 2066.085 kb on - strand, within ABIE51_RS09590 at 2066.085 kb on - strand, within ABIE51_RS09590 at 2066.085 kb on - strand, within ABIE51_RS09590 at 2066.085 kb on - strand, within ABIE51_RS09590 at 2066.085 kb on - strand, within ABIE51_RS09590 at 2066.085 kb on - strand, within ABIE51_RS09590 at 2066.085 kb on - strand, within ABIE51_RS09590 at 2066.085 kb on - strand, within ABIE51_RS09590 at 2066.085 kb on - strand, within ABIE51_RS09590 at 2066.257 kb on + strand at 2066.845 kb on + strand, within ABIE51_RS09595 at 2066.845 kb on + strand, within ABIE51_RS09595 at 2066.845 kb on + strand, within ABIE51_RS09595 at 2066.846 kb on - strand, within ABIE51_RS09595 at 2067.017 kb on + strand, within ABIE51_RS09595 at 2067.019 kb on + strand, within ABIE51_RS09595 at 2067.020 kb on - strand, within ABIE51_RS09595 at 2067.020 kb on - strand, within ABIE51_RS09595 at 2067.020 kb on - strand, within ABIE51_RS09595 at 2067.614 kb on + strand, within ABIE51_RS09600 at 2067.618 kb on + strand, within ABIE51_RS09600 at 2067.618 kb on + strand, within ABIE51_RS09600 at 2067.619 kb on - strand, within ABIE51_RS09600 at 2067.619 kb on - strand, within ABIE51_RS09600 at 2067.619 kb on - strand, within ABIE51_RS09600 at 2067.995 kb on + strand at 2067.995 kb on + strand at 2068.294 kb on + strand, within ABIE51_RS09605 at 2068.294 kb on + strand, within ABIE51_RS09605
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 2,065,425 - ABIE51_RS09585 0.53 +0.4 2,065,554 + -0.1 2,065,554 + +0.8 2,065,554 + +0.7 2,065,555 - -0.4 2,065,555 - +1.2 2,065,555 - -0.1 2,065,555 - +0.3 2,065,921 + ABIE51_RS09590 0.50 +0.7 2,065,922 - ABIE51_RS09590 0.50 +0.2 2,065,922 - ABIE51_RS09590 0.50 +0.3 2,066,080 + ABIE51_RS09590 0.74 +0.3 2,066,081 - ABIE51_RS09590 0.74 -0.1 2,066,081 - ABIE51_RS09590 0.74 -0.4 2,066,081 - ABIE51_RS09590 0.74 +0.6 2,066,083 - ABIE51_RS09590 0.74 +0.0 2,066,083 - ABIE51_RS09590 0.74 +0.4 2,066,084 + ABIE51_RS09590 0.74 -0.4 2,066,084 + ABIE51_RS09590 0.74 -1.7 2,066,084 + ABIE51_RS09590 0.74 -0.7 2,066,084 + ABIE51_RS09590 0.74 -1.1 2,066,084 + ABIE51_RS09590 0.74 -1.7 2,066,084 + ABIE51_RS09590 0.74 +0.1 2,066,085 - ABIE51_RS09590 0.74 -0.8 2,066,085 - ABIE51_RS09590 0.74 +0.3 2,066,085 - ABIE51_RS09590 0.74 +0.3 2,066,085 - ABIE51_RS09590 0.74 -0.1 2,066,085 - ABIE51_RS09590 0.74 +1.5 2,066,085 - ABIE51_RS09590 0.74 +0.3 2,066,085 - ABIE51_RS09590 0.74 +0.6 2,066,085 - ABIE51_RS09590 0.74 -1.7 2,066,085 - ABIE51_RS09590 0.74 -0.2 2,066,085 - ABIE51_RS09590 0.74 +0.2 2,066,257 + +0.5 2,066,845 + ABIE51_RS09595 0.53 +0.2 2,066,845 + ABIE51_RS09595 0.53 -2.6 2,066,845 + ABIE51_RS09595 0.53 +1.3 2,066,846 - ABIE51_RS09595 0.53 +0.7 2,067,017 + ABIE51_RS09595 0.70 -0.8 2,067,019 + ABIE51_RS09595 0.70 +0.4 2,067,020 - ABIE51_RS09595 0.70 -0.9 2,067,020 - ABIE51_RS09595 0.70 -0.1 2,067,020 - ABIE51_RS09595 0.70 +1.0 2,067,614 + ABIE51_RS09600 0.85 -0.1 2,067,618 + ABIE51_RS09600 0.87 +0.7 2,067,618 + ABIE51_RS09600 0.87 +0.2 2,067,619 - ABIE51_RS09600 0.87 -1.3 2,067,619 - ABIE51_RS09600 0.87 +1.6 2,067,619 - ABIE51_RS09600 0.87 +1.7 2,067,995 + -0.8 2,067,995 + -1.5 2,068,294 + ABIE51_RS09605 0.12 +1.2 2,068,294 + ABIE51_RS09605 0.12 +0.7
Or see this region's nucleotide sequence