Experiment: Cobalt chloride 10 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_12065 and IAI47_12070 are separated by 154 nucleotides IAI47_12070 and IAI47_12075 are separated by 10 nucleotides IAI47_12075 and IAI47_12080 are separated by 16 nucleotides IAI47_12080 and IAI47_12085 are separated by 0 nucleotides
IAI47_12065: IAI47_12065 - acyl carrier protein, at 2,555,258 to 2,555,494
_12065
IAI47_12070: IAI47_12070 - 3-oxoacyl-ACP reductase FabG, at 2,555,649 to 2,556,383
_12070
IAI47_12075: IAI47_12075 - ACP S-malonyltransferase, at 2,556,394 to 2,557,326
_12075
IAI47_12080: IAI47_12080 - ketoacyl-ACP synthase III, at 2,557,343 to 2,558,296
_12080
IAI47_12085: IAI47_12085 - phosphate acyltransferase PlsX, at 2,558,297 to 2,559,337
_12085
Position (kb)
2556
2557
2558 Strain fitness (log2 ratio)
-1
0
1 at 2555.603 kb on - strand at 2555.647 kb on + strand at 2555.648 kb on - strand at 2555.648 kb on - strand at 2555.648 kb on - strand at 2555.660 kb on - strand at 2555.660 kb on - strand at 2556.396 kb on - strand at 2556.396 kb on - strand at 2556.430 kb on - strand at 2556.430 kb on - strand at 2558.319 kb on - strand at 2558.322 kb on - strand at 2558.322 kb on - strand at 2558.322 kb on - strand at 2558.322 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 10 uM, aerobic remove 2,555,603 - +0.9 2,555,647 + +1.6 2,555,648 - -0.3 2,555,648 - +0.2 2,555,648 - -0.0 2,555,660 - -0.6 2,555,660 - +1.1 2,556,396 - +0.5 2,556,396 - -0.6 2,556,430 - -1.3 2,556,430 - -0.6 2,558,319 - -0.6 2,558,322 - -0.5 2,558,322 - +1.1 2,558,322 - +0.1 2,558,322 - +0.3
Or see this region's nucleotide sequence