Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01055

Experiment: L-Leucine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Leucine (N)
1,153,962	+		CCNA_01054	0.42	+1.7
1,153,967	+		CCNA_01054	0.42	+0.2
1,153,969	+		CCNA_01054	0.43	+2.7
1,153,969	+		CCNA_01054	0.43	-1.3
1,153,969	+		CCNA_01054	0.43	-1.5
1,153,976	-		CCNA_01054	0.43	-0.1
1,153,977	-		CCNA_01054	0.43	-1.3
1,153,977	-		CCNA_01054	0.43	-0.6
1,153,977	-		CCNA_01054	0.43	+1.0
1,153,977	-		CCNA_01054	0.43	-2.2
1,154,023	-		CCNA_01054	0.46	-0.2
1,154,043	-		CCNA_01054	0.47	+1.4
1,154,054	+		CCNA_01054	0.48	+0.2
1,154,054	+		CCNA_01054	0.48	+0.0
1,154,054	+		CCNA_01054	0.48	-0.9
1,154,054	+		CCNA_01054	0.48	-0.5
1,154,054	+		CCNA_01054	0.48	-0.9
1,154,054	+		CCNA_01054	0.48	+1.0
1,154,062	-		CCNA_01054	0.49	+2.2
1,154,062	-		CCNA_01054	0.49	+0.4
1,154,062	-		CCNA_01054	0.49	-2.1
1,154,081	-		CCNA_01054	0.50	+1.6
1,154,084	+		CCNA_01054	0.50	+0.9
1,154,085	+		CCNA_01054	0.50	-1.3
1,154,092	-		CCNA_01054	0.51	-1.4
1,154,133	+		CCNA_01054	0.53	-0.5
1,154,133	+		CCNA_01054	0.53	+0.7
1,154,239	-		CCNA_01054	0.61	-0.2
1,154,269	-		CCNA_01054	0.63	-0.1
1,154,288	-		CCNA_01054	0.64	+1.4
1,154,304	+		CCNA_01054	0.65	-0.5
1,154,304	+		CCNA_01054	0.65	-1.5
1,154,312	-		CCNA_01054	0.65	+1.2
1,154,362	-		CCNA_01054	0.69	-0.2
1,154,392	+		CCNA_01054	0.71	-0.2
1,154,400	-		CCNA_01054	0.71	+0.4
1,154,414	-		CCNA_01054	0.72	-0.7
1,154,426	+		CCNA_01054	0.73	-1.2
1,154,451	-		CCNA_01054	0.75	-1.1
1,154,456	-		CCNA_01054	0.75	+0.6
1,154,485	+		CCNA_01054	0.77	-1.9
1,154,488	-		CCNA_01054	0.77	+0.8
1,154,519	+		CCNA_01054	0.79	-0.8
1,154,530	+		CCNA_01054	0.80	-1.2
1,154,538	+		CCNA_01054	0.80	-0.7
1,154,556	+		CCNA_01054	0.82	-1.3
1,154,599	+		CCNA_01054	0.85	-1.3
1,154,605	-		CCNA_01054	0.85	-1.3
1,154,645	-		CCNA_01054	0.88	+0.5
1,154,657	-		CCNA_01054	0.88	-0.2
1,154,669	+		CCNA_01054	0.89	+0.4
1,154,681	-				+0.7
1,154,698	-				-1.0
1,154,733	+				-0.6
1,154,759	+				-0.7
1,154,759	+				-0.8
1,154,759	+				-2.7
1,154,767	-				-0.3
1,154,767	-				+0.1
1,154,824	+				+0.4
1,154,847	-				+0.9
1,154,871	+				-1.0
1,154,876	-				-0.6
1,154,879	-				-0.9
1,154,881	+				-0.3
1,154,881	+				-0.2
1,154,889	-				-0.7
1,154,889	-				-0.6
1,154,912	+				-1.7
1,154,980	+		CCNA_01055	0.10	-2.8
1,154,982	-		CCNA_01055	0.11	-1.0
1,155,005	-		CCNA_01055	0.12	-1.0
1,155,006	-		CCNA_01055	0.12	-0.6
1,155,021	-		CCNA_01055	0.14	-0.6
1,155,025	+		CCNA_01055	0.14	-0.2
1,155,033	+		CCNA_01055	0.14	-0.1
1,155,043	+				+1.2
1,155,192	+		CCNA_01055	0.27	-1.7
1,155,200	-		CCNA_01055	0.27	-1.7
1,155,224	-		CCNA_01055	0.29	+0.1
1,155,224	-		CCNA_01055	0.29	-1.9
1,155,247	+		CCNA_01055	0.31	+0.1
1,155,370	+		CCNA_01055	0.40	+0.1
1,155,378	-		CCNA_01055	0.41	-1.0
1,155,380	-		CCNA_01055	0.41	-1.2
1,155,397	-		CCNA_01055	0.42	-2.3
1,155,426	+		CCNA_01055	0.45	-1.2
1,155,428	-		CCNA_01055	0.45	-0.7
1,155,437	+		CCNA_01055	0.45	-1.4
1,155,445	-		CCNA_01055	0.46	+0.1
1,155,462	-		CCNA_01055	0.47	-1.2
1,155,513	-		CCNA_01055	0.51	-0.5
1,155,559	+		CCNA_01055	0.55	-1.7
1,155,562	-		CCNA_01055	0.55	-1.0
1,155,567	-		CCNA_01055	0.55	-0.6
1,155,567	-		CCNA_01055	0.55	-0.4
1,155,567	-		CCNA_01055	0.55	+0.8
1,155,697	+		CCNA_01055	0.65	-0.9
1,155,713	+		CCNA_01055	0.67	-1.1
1,155,716	-		CCNA_01055	0.67	-0.2
1,155,716	-		CCNA_01055	0.67	-0.2
1,155,727	+		CCNA_01055	0.68	-1.4
1,155,740	+		CCNA_01055	0.69	-1.4
1,155,748	-		CCNA_01055	0.69	-0.3
1,155,789	-		CCNA_01055	0.72	-0.9
1,155,791	+				+0.4
1,155,802	+		CCNA_01055	0.73	-2.6
1,155,806	+		CCNA_01055	0.74	+0.0
1,155,812	-		CCNA_01055	0.74	-0.3
1,155,879	-		CCNA_01055	0.79	-2.6
1,155,957	+		CCNA_01055	0.85	-1.7
1,155,962	+		CCNA_01055	0.86	-1.7
1,155,970	-		CCNA_01055	0.86	-0.5
1,156,023	+				-0.8
1,156,031	-				-0.3
1,156,031	-				-0.6
1,156,036	-				-0.4
1,156,076	-				-0.8
1,156,113	+				+2.0
1,156,127	+				-1.2
1,156,163	-				-1.2
1,156,194	-				-0.7
1,156,225	-				-1.0
1,156,273	-				-0.9
1,156,279	+				-0.4
1,156,291	-		CCNA_01056	0.10	-0.7
1,156,312	-		CCNA_01056	0.12	-0.7
1,156,313	+		CCNA_01056	0.12	-0.3
1,156,314	+		CCNA_01056	0.12	-2.2
1,156,321	-		CCNA_01056	0.12	-1.3
1,156,322	-		CCNA_01056	0.12	-2.5
1,156,322	-		CCNA_01056	0.12	-0.4
1,156,369	-		CCNA_01056	0.16	+0.6
1,156,409	+		CCNA_01056	0.19	-0.8
1,156,419	-		CCNA_01056	0.20	-0.2
1,156,429	-		CCNA_01056	0.21	-2.0
1,156,462	-		CCNA_01056	0.23	-0.9
1,156,464	+		CCNA_01056	0.23	-1.3
1,156,474	-		CCNA_01056	0.24	-0.3
1,156,513	-		CCNA_01056	0.27	+1.0
1,156,513	-		CCNA_01056	0.27	-2.6
1,156,520	+		CCNA_01056	0.28	-2.3
1,156,543	-		CCNA_01056	0.29	+0.3
1,156,581	+		CCNA_01056	0.32	+0.5
1,156,634	+		CCNA_01056	0.36	+0.8
1,156,735	+		CCNA_01056	0.44	-1.0
1,156,735	+		CCNA_01056	0.44	-0.4
1,156,735	+		CCNA_01056	0.44	+0.4
1,156,743	-		CCNA_01056	0.45	-1.5
1,156,792	-		CCNA_01056	0.48	-0.5
1,156,797	+		CCNA_01056	0.49	-1.8
1,156,805	-		CCNA_01056	0.49	+0.6
1,156,830	+		CCNA_01056	0.51	-0.1
1,156,858	-		CCNA_01056	0.53	-1.9
1,156,872	-		CCNA_01056	0.55	-0.5
1,156,881	-		CCNA_01056	0.55	-1.3
1,156,971	-		CCNA_01056	0.62	-0.6
1,156,983	-		CCNA_01056	0.63	-1.2
1,157,012	-		CCNA_01056	0.65	+0.1
1,157,085	-		CCNA_01056	0.71	+0.9
1,157,096	+		CCNA_01056	0.72	-0.5
1,157,126	+		CCNA_01056	0.74	-0.1
1,157,134	-		CCNA_01056	0.75	-1.4
1,157,134	-		CCNA_01056	0.75	+0.5
1,157,134	-		CCNA_01056	0.75	-0.5