Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2695 and Ac3H11_2696 are separated by 11 nucleotides Ac3H11_2696 and Ac3H11_2697 are separated by 27 nucleotides Ac3H11_2697 and Ac3H11_2698 overlap by 4 nucleotides
Ac3H11_2695 - Exonuclease SbcD, at 990,692 to 991,933
_2695
Ac3H11_2696 - hypothetical protein, at 991,945 to 993,243
_2696
Ac3H11_2697 - hypothetical protein, at 993,271 to 993,387
_2697
Ac3H11_2698 - hypothetical protein, at 993,384 to 994,802
_2698
Position (kb) 991
992
993
994 Strain fitness (log2 ratio) -1
0
1
2 at 991.538 kb on + strand, within Ac3H11_2695 at 991.698 kb on + strand, within Ac3H11_2695 at 991.698 kb on + strand, within Ac3H11_2695 at 991.698 kb on + strand, within Ac3H11_2695 at 991.698 kb on + strand, within Ac3H11_2695 at 991.698 kb on + strand, within Ac3H11_2695 at 991.699 kb on - strand, within Ac3H11_2695 at 991.985 kb on + strand at 992.007 kb on - strand at 992.094 kb on - strand, within Ac3H11_2696 at 992.148 kb on + strand, within Ac3H11_2696 at 992.149 kb on - strand, within Ac3H11_2696 at 992.537 kb on + strand, within Ac3H11_2696 at 992.538 kb on - strand, within Ac3H11_2696 at 992.786 kb on + strand, within Ac3H11_2696 at 992.786 kb on + strand, within Ac3H11_2696 at 992.787 kb on - strand, within Ac3H11_2696 at 992.787 kb on - strand, within Ac3H11_2696 at 992.918 kb on + strand, within Ac3H11_2696 at 992.918 kb on + strand, within Ac3H11_2696 at 993.086 kb on + strand, within Ac3H11_2696 at 993.086 kb on + strand, within Ac3H11_2696 at 993.086 kb on + strand, within Ac3H11_2696 at 993.086 kb on + strand, within Ac3H11_2696 at 993.087 kb on - strand, within Ac3H11_2696 at 993.087 kb on - strand, within Ac3H11_2696 at 993.087 kb on - strand, within Ac3H11_2696 at 993.087 kb on - strand, within Ac3H11_2696 at 993.087 kb on - strand, within Ac3H11_2696 at 993.368 kb on - strand, within Ac3H11_2697 at 993.385 kb on + strand at 993.386 kb on - strand at 993.473 kb on + strand at 993.504 kb on + strand at 993.504 kb on + strand at 993.504 kb on + strand at 993.504 kb on + strand at 993.505 kb on - strand at 993.505 kb on - strand at 993.505 kb on - strand at 993.505 kb on - strand at 993.505 kb on - strand at 993.505 kb on - strand at 993.660 kb on + strand, within Ac3H11_2698 at 993.730 kb on - strand, within Ac3H11_2698 at 994.027 kb on + strand, within Ac3H11_2698 at 994.027 kb on + strand, within Ac3H11_2698 at 994.027 kb on + strand, within Ac3H11_2698 at 994.028 kb on - strand, within Ac3H11_2698 at 994.087 kb on + strand, within Ac3H11_2698 at 994.087 kb on + strand, within Ac3H11_2698 at 994.087 kb on + strand, within Ac3H11_2698
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 991,538 + Ac3H11_2695 0.68 -0.1 991,698 + Ac3H11_2695 0.81 -0.9 991,698 + Ac3H11_2695 0.81 -0.3 991,698 + Ac3H11_2695 0.81 +0.3 991,698 + Ac3H11_2695 0.81 -0.8 991,698 + Ac3H11_2695 0.81 +0.2 991,699 - Ac3H11_2695 0.81 +0.6 991,985 + +0.4 992,007 - -0.6 992,094 - Ac3H11_2696 0.11 +0.7 992,148 + Ac3H11_2696 0.16 -0.3 992,149 - Ac3H11_2696 0.16 -0.3 992,537 + Ac3H11_2696 0.46 +0.3 992,538 - Ac3H11_2696 0.46 +0.5 992,786 + Ac3H11_2696 0.65 +0.1 992,786 + Ac3H11_2696 0.65 +0.3 992,787 - Ac3H11_2696 0.65 -0.5 992,787 - Ac3H11_2696 0.65 -0.1 992,918 + Ac3H11_2696 0.75 -0.3 992,918 + Ac3H11_2696 0.75 -0.5 993,086 + Ac3H11_2696 0.88 +0.1 993,086 + Ac3H11_2696 0.88 +0.1 993,086 + Ac3H11_2696 0.88 -0.1 993,086 + Ac3H11_2696 0.88 -0.6 993,087 - Ac3H11_2696 0.88 +0.3 993,087 - Ac3H11_2696 0.88 -1.0 993,087 - Ac3H11_2696 0.88 +1.8 993,087 - Ac3H11_2696 0.88 -0.3 993,087 - Ac3H11_2696 0.88 +0.1 993,368 - Ac3H11_2697 0.83 -0.8 993,385 + -0.6 993,386 - -1.3 993,473 + +0.4 993,504 + -0.6 993,504 + -0.7 993,504 + +1.1 993,504 + -0.4 993,505 - +0.8 993,505 - +0.3 993,505 - -0.9 993,505 - +0.0 993,505 - +0.3 993,505 - -0.7 993,660 + Ac3H11_2698 0.19 -0.8 993,730 - Ac3H11_2698 0.24 -0.2 994,027 + Ac3H11_2698 0.45 +0.1 994,027 + Ac3H11_2698 0.45 -0.4 994,027 + Ac3H11_2698 0.45 -0.2 994,028 - Ac3H11_2698 0.45 +0.4 994,087 + Ac3H11_2698 0.50 -1.1 994,087 + Ac3H11_2698 0.50 -0.1 994,087 + Ac3H11_2698 0.50 +0.6
Or see this region's nucleotide sequence