Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS20805 and AZOBR_RS20810 are separated by 89 nucleotides AZOBR_RS20810 and AZOBR_RS20815 are separated by 455 nucleotides
AZOBR_RS20805: AZOBR_RS20805 - hypothetical protein, at 1,421,977 to 1,422,972
_RS20805
AZOBR_RS20810: AZOBR_RS20810 - hemolysin, at 1,423,062 to 1,423,814
_RS20810
AZOBR_RS20815: AZOBR_RS20815 - CRISPR-associated protein, at 1,424,270 to 1,424,941
_RS20815
Position (kb)
1423
1424 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1422.577 kb on + strand, within AZOBR_RS20805 at 1422.733 kb on + strand, within AZOBR_RS20805 at 1422.734 kb on - strand at 1422.734 kb on - strand, within AZOBR_RS20805 at 1422.734 kb on - strand, within AZOBR_RS20805 at 1422.739 kb on + strand, within AZOBR_RS20805 at 1422.740 kb on - strand, within AZOBR_RS20805 at 1423.380 kb on + strand, within AZOBR_RS20810 at 1423.526 kb on + strand, within AZOBR_RS20810 at 1423.857 kb on - strand at 1423.926 kb on + strand at 1423.949 kb on + strand at 1424.023 kb on + strand at 1424.066 kb on + strand at 1424.287 kb on - strand at 1424.287 kb on - strand at 1424.352 kb on - strand, within AZOBR_RS20815 at 1424.352 kb on - strand, within AZOBR_RS20815 at 1424.362 kb on + strand, within AZOBR_RS20815 at 1424.362 kb on + strand, within AZOBR_RS20815 at 1424.438 kb on + strand, within AZOBR_RS20815 at 1424.438 kb on + strand, within AZOBR_RS20815 at 1424.438 kb on + strand, within AZOBR_RS20815 at 1424.439 kb on - strand, within AZOBR_RS20815 at 1424.439 kb on - strand, within AZOBR_RS20815 at 1424.439 kb on - strand, within AZOBR_RS20815 at 1424.609 kb on + strand, within AZOBR_RS20815 at 1424.610 kb on - strand, within AZOBR_RS20815 at 1424.610 kb on - strand, within AZOBR_RS20815 at 1424.610 kb on - strand, within AZOBR_RS20815 at 1424.610 kb on - strand, within AZOBR_RS20815
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 1,422,577 + AZOBR_RS20805 0.60 -2.8 1,422,733 + AZOBR_RS20805 0.76 -1.5 1,422,734 - -1.1 1,422,734 - AZOBR_RS20805 0.76 -3.3 1,422,734 - AZOBR_RS20805 0.76 -2.8 1,422,739 + AZOBR_RS20805 0.77 -1.3 1,422,740 - AZOBR_RS20805 0.77 -1.5 1,423,380 + AZOBR_RS20810 0.42 +1.3 1,423,526 + AZOBR_RS20810 0.62 +0.1 1,423,857 - +0.2 1,423,926 + -0.1 1,423,949 + -1.6 1,424,023 + -0.1 1,424,066 + -0.1 1,424,287 - +0.7 1,424,287 - -0.1 1,424,352 - AZOBR_RS20815 0.12 -0.1 1,424,352 - AZOBR_RS20815 0.12 +0.1 1,424,362 + AZOBR_RS20815 0.14 -0.2 1,424,362 + AZOBR_RS20815 0.14 +0.4 1,424,438 + AZOBR_RS20815 0.25 +0.5 1,424,438 + AZOBR_RS20815 0.25 +0.7 1,424,438 + AZOBR_RS20815 0.25 -0.3 1,424,439 - AZOBR_RS20815 0.25 -0.0 1,424,439 - AZOBR_RS20815 0.25 -0.2 1,424,439 - AZOBR_RS20815 0.25 -0.4 1,424,609 + AZOBR_RS20815 0.50 +1.1 1,424,610 - AZOBR_RS20815 0.51 +0.1 1,424,610 - AZOBR_RS20815 0.51 -0.4 1,424,610 - AZOBR_RS20815 0.51 -0.8 1,424,610 - AZOBR_RS20815 0.51 -0.7
Or see this region's nucleotide sequence