Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS05755

Experiment: D-Fructose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS05745 and AZOBR_RS05750 are separated by 197 nucleotidesAZOBR_RS05750 and AZOBR_RS05755 are separated by 306 nucleotidesAZOBR_RS05755 and AZOBR_RS05760 are separated by 252 nucleotides AZOBR_RS05745: AZOBR_RS05745 - conserved exported protein of unknown function, at 1,218,045 to 1,218,320 _RS05745 AZOBR_RS05750: AZOBR_RS05750 - hypothetical protein, at 1,218,518 to 1,218,895 _RS05750 AZOBR_RS05755: AZOBR_RS05755 - Butyryl-CoA dehydrogenase (EC 1.3.8.1) (from data), at 1,219,202 to 1,221,001 _RS05755 AZOBR_RS05760: AZOBR_RS05760 - hypothetical protein, at 1,221,254 to 1,222,294 _RS05760 Position (kb) 1219 1220 1221 1222Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1218.603 kb on + strand, within AZOBR_RS05750at 1218.603 kb on + strand, within AZOBR_RS05750at 1218.618 kb on + strand, within AZOBR_RS05750at 1218.738 kb on + strand, within AZOBR_RS05750at 1218.739 kb on - strand, within AZOBR_RS05750at 1218.739 kb on - strand, within AZOBR_RS05750at 1219.428 kb on + strand, within AZOBR_RS05755at 1219.429 kb on - strand, within AZOBR_RS05755at 1219.687 kb on - strand, within AZOBR_RS05755at 1220.136 kb on + strand, within AZOBR_RS05755at 1220.136 kb on + strand, within AZOBR_RS05755at 1220.137 kb on - strand, within AZOBR_RS05755at 1220.440 kb on - strand, within AZOBR_RS05755at 1220.707 kb on - strand, within AZOBR_RS05755at 1221.143 kb on - strandat 1221.143 kb on - strandat 1221.462 kb on - strand, within AZOBR_RS05760at 1221.530 kb on + strand, within AZOBR_RS05760at 1221.530 kb on + strand, within AZOBR_RS05760at 1221.569 kb on + strand, within AZOBR_RS05760at 1221.570 kb on - strand, within AZOBR_RS05760at 1221.650 kb on + strand, within AZOBR_RS05760at 1221.651 kb on - strand, within AZOBR_RS05760at 1221.671 kb on + strand, within AZOBR_RS05760at 1221.671 kb on + strand, within AZOBR_RS05760at 1221.716 kb on + strand, within AZOBR_RS05760at 1221.716 kb on + strand, within AZOBR_RS05760at 1221.716 kb on + strand, within AZOBR_RS05760at 1221.716 kb on + strand, within AZOBR_RS05760at 1221.717 kb on - strand, within AZOBR_RS05760at 1221.717 kb on - strand, within AZOBR_RS05760at 1221.881 kb on + strand, within AZOBR_RS05760at 1221.881 kb on + strand, within AZOBR_RS05760at 1221.881 kb on + strand, within AZOBR_RS05760at 1221.882 kb on - strand, within AZOBR_RS05760at 1221.882 kb on - strand, within AZOBR_RS05760

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Fructose (C)
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1,218,603 + AZOBR_RS05750 0.22 +0.4
1,218,603 + AZOBR_RS05750 0.22 +0.8
1,218,618 + AZOBR_RS05750 0.26 -0.7
1,218,738 + AZOBR_RS05750 0.58 +0.1
1,218,739 - AZOBR_RS05750 0.58 +0.1
1,218,739 - AZOBR_RS05750 0.58 +0.3
1,219,428 + AZOBR_RS05755 0.13 -0.1
1,219,429 - AZOBR_RS05755 0.13 +0.3
1,219,687 - AZOBR_RS05755 0.27 -0.1
1,220,136 + AZOBR_RS05755 0.52 -0.6
1,220,136 + AZOBR_RS05755 0.52 +0.3
1,220,137 - AZOBR_RS05755 0.52 +0.4
1,220,440 - AZOBR_RS05755 0.69 -0.4
1,220,707 - AZOBR_RS05755 0.84 -0.7
1,221,143 - -0.5
1,221,143 - +0.4
1,221,462 - AZOBR_RS05760 0.20 -0.7
1,221,530 + AZOBR_RS05760 0.27 -3.8
1,221,530 + AZOBR_RS05760 0.27 -1.4
1,221,569 + AZOBR_RS05760 0.30 -1.0
1,221,570 - AZOBR_RS05760 0.30 -1.1
1,221,650 + AZOBR_RS05760 0.38 -1.2
1,221,651 - AZOBR_RS05760 0.38 -1.4
1,221,671 + AZOBR_RS05760 0.40 -1.2
1,221,671 + AZOBR_RS05760 0.40 -1.8
1,221,716 + AZOBR_RS05760 0.44 -1.7
1,221,716 + AZOBR_RS05760 0.44 -1.0
1,221,716 + AZOBR_RS05760 0.44 -0.8
1,221,716 + AZOBR_RS05760 0.44 -0.8
1,221,717 - AZOBR_RS05760 0.44 -1.7
1,221,717 - AZOBR_RS05760 0.44 -1.2
1,221,881 + AZOBR_RS05760 0.60 -2.4
1,221,881 + AZOBR_RS05760 0.60 -2.4
1,221,881 + AZOBR_RS05760 0.60 -1.2
1,221,882 - AZOBR_RS05760 0.60 -1.4
1,221,882 - AZOBR_RS05760 0.60 -1.4

Or see this region's nucleotide sequence