Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS05080 and AZOBR_RS05085 are separated by 268 nucleotides AZOBR_RS05085 and AZOBR_RS05090 are separated by 182 nucleotides AZOBR_RS05090 and AZOBR_RS05095 are separated by 364 nucleotides
AZOBR_RS05080: AZOBR_RS05080 - orotate phosphoribosyltransferase, at 1,078,852 to 1,079,544
_RS05080
AZOBR_RS05085: AZOBR_RS05085 - riboflavin kinase, at 1,079,813 to 1,080,769
_RS05085
AZOBR_RS05090: AZOBR_RS05090 - MaoC family dehydratase, at 1,080,952 to 1,081,401
_RS05090
AZOBR_RS05095: AZOBR_RS05095 - hypothetical protein, at 1,081,766 to 1,082,359
_RS05095
Position (kb)
1079
1080
1081 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1078.946 kb on + strand at 1079.231 kb on + strand, within AZOBR_RS05080 at 1079.232 kb on - strand, within AZOBR_RS05080 at 1079.232 kb on - strand, within AZOBR_RS05080 at 1079.550 kb on - strand at 1080.856 kb on - strand at 1080.856 kb on - strand at 1080.858 kb on - strand at 1080.858 kb on - strand at 1080.860 kb on - strand at 1080.860 kb on - strand at 1080.882 kb on + strand at 1080.882 kb on + strand at 1080.883 kb on - strand at 1080.883 kb on - strand at 1080.916 kb on + strand at 1081.133 kb on + strand, within AZOBR_RS05090 at 1081.133 kb on + strand, within AZOBR_RS05090 at 1081.133 kb on + strand, within AZOBR_RS05090 at 1081.134 kb on - strand, within AZOBR_RS05090 at 1081.134 kb on - strand, within AZOBR_RS05090 at 1081.134 kb on - strand, within AZOBR_RS05090 at 1081.134 kb on - strand, within AZOBR_RS05090 at 1081.134 kb on - strand, within AZOBR_RS05090 at 1081.134 kb on - strand, within AZOBR_RS05090 at 1081.450 kb on + strand at 1081.451 kb on - strand at 1081.465 kb on + strand at 1081.465 kb on + strand at 1081.635 kb on + strand at 1081.635 kb on + strand at 1081.635 kb on + strand at 1081.636 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 1,078,946 + +1.9 1,079,231 + AZOBR_RS05080 0.55 -0.7 1,079,232 - AZOBR_RS05080 0.55 -3.0 1,079,232 - AZOBR_RS05080 0.55 -4.7 1,079,550 - -1.9 1,080,856 - +0.1 1,080,856 - +0.1 1,080,858 - +0.5 1,080,858 - +0.0 1,080,860 - +0.3 1,080,860 - +0.4 1,080,882 + +0.4 1,080,882 + -0.1 1,080,883 - +0.1 1,080,883 - +0.1 1,080,916 + -0.1 1,081,133 + AZOBR_RS05090 0.40 +0.6 1,081,133 + AZOBR_RS05090 0.40 -0.3 1,081,133 + AZOBR_RS05090 0.40 -0.8 1,081,134 - AZOBR_RS05090 0.40 -0.7 1,081,134 - AZOBR_RS05090 0.40 +0.3 1,081,134 - AZOBR_RS05090 0.40 -1.1 1,081,134 - AZOBR_RS05090 0.40 -0.2 1,081,134 - AZOBR_RS05090 0.40 -0.2 1,081,134 - AZOBR_RS05090 0.40 +0.2 1,081,450 + +0.0 1,081,451 - -0.5 1,081,465 + -0.4 1,081,465 + +0.3 1,081,635 + +0.1 1,081,635 + -0.4 1,081,635 + -0.2 1,081,636 - -0.2
Or see this region's nucleotide sequence