Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS04315 and AZOBR_RS04320 are separated by 157 nucleotides AZOBR_RS04320 and AZOBR_RS04325 are separated by 153 nucleotides AZOBR_RS04325 and AZOBR_RS04330 are separated by 47 nucleotides AZOBR_RS04330 and AZOBR_RS04335 are separated by 306 nucleotides
AZOBR_RS04315: AZOBR_RS04315 - transporter, at 907,098 to 908,018
_RS04315
AZOBR_RS04320: AZOBR_RS04320 - exported protein of unknown function, at 908,176 to 908,610
_RS04320
AZOBR_RS04325: AZOBR_RS04325 - glutaredoxin, at 908,764 to 909,105
_RS04325
AZOBR_RS04330: AZOBR_RS04330 - ATP-binding protein, at 909,153 to 909,392
_RS04330
AZOBR_RS04335: AZOBR_RS04335 - phosphoribosylformylglycinamidine synthase, at 909,699 to 911,915
_RS04335
Position (kb) 908
909
910 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 908.109 kb on + strand at 909.122 kb on - strand at 909.122 kb on - strand at 909.155 kb on - strand at 909.441 kb on - strand at 909.443 kb on - strand at 909.718 kb on + strand at 909.718 kb on + strand at 909.718 kb on + strand at 909.719 kb on - strand at 909.892 kb on + strand at 909.892 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 908,109 + +0.2 909,122 - -0.3 909,122 - -0.4 909,155 - +0.5 909,441 - -0.9 909,443 - -0.1 909,718 + -1.4 909,718 + -1.0 909,718 + -1.1 909,719 - -0.9 909,892 + -2.9 909,892 + -3.5
Or see this region's nucleotide sequence