Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_18315 and AO353_18320 are separated by 140 nucleotides AO353_18320 and AO353_18325 are separated by 315 nucleotides AO353_18325 and AO353_18330 are separated by 293 nucleotides
AO353_18315: AO353_18315 - hypothetical protein, at 4,038,533 to 4,039,114
_18315
AO353_18320: AO353_18320 - hypothetical protein, at 4,039,255 to 4,039,698
_18320
AO353_18325: AO353_18325 - hypothetical protein, at 4,040,014 to 4,040,397
_18325
AO353_18330: AO353_18330 - short-chain dehydrogenase, at 4,040,691 to 4,040,957
_18330
Position (kb)
4039
4040 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 4038.257 kb on + strand at 4038.257 kb on + strand at 4038.257 kb on + strand at 4038.257 kb on + strand at 4038.257 kb on + strand at 4038.257 kb on + strand at 4038.257 kb on + strand at 4038.257 kb on + strand at 4038.257 kb on + strand at 4038.258 kb on - strand at 4038.258 kb on - strand at 4038.258 kb on - strand at 4038.258 kb on - strand at 4038.258 kb on - strand at 4038.260 kb on + strand at 4038.260 kb on + strand at 4038.260 kb on + strand at 4038.260 kb on + strand at 4038.260 kb on + strand at 4038.260 kb on + strand at 4038.260 kb on + strand at 4038.261 kb on - strand at 4038.261 kb on - strand at 4038.261 kb on - strand at 4038.261 kb on - strand at 4038.261 kb on - strand at 4038.261 kb on - strand at 4038.261 kb on - strand at 4038.261 kb on - strand at 4038.261 kb on - strand at 4038.275 kb on + strand at 4038.275 kb on + strand at 4038.275 kb on + strand at 4038.276 kb on - strand at 4038.358 kb on + strand at 4038.358 kb on + strand at 4038.358 kb on + strand at 4038.358 kb on + strand at 4038.358 kb on + strand at 4038.358 kb on + strand at 4038.358 kb on + strand at 4038.358 kb on + strand at 4038.358 kb on + strand at 4038.358 kb on + strand at 4038.358 kb on + strand at 4038.359 kb on - strand at 4038.359 kb on - strand at 4038.359 kb on - strand at 4038.359 kb on - strand at 4038.359 kb on - strand at 4038.359 kb on - strand at 4038.359 kb on - strand at 4038.359 kb on - strand at 4038.359 kb on - strand at 4038.359 kb on - strand at 4038.359 kb on - strand at 4038.359 kb on - strand at 4038.359 kb on - strand at 4038.362 kb on + strand at 4038.362 kb on + strand at 4038.362 kb on + strand at 4038.362 kb on + strand at 4038.362 kb on + strand at 4038.362 kb on + strand at 4038.362 kb on + strand at 4038.363 kb on - strand at 4038.363 kb on - strand at 4038.363 kb on - strand at 4038.363 kb on - strand at 4038.363 kb on - strand at 4038.386 kb on + strand at 4038.485 kb on - strand at 4038.498 kb on + strand at 4038.498 kb on + strand at 4038.498 kb on + strand at 4038.499 kb on - strand at 4038.503 kb on + strand at 4038.504 kb on - strand at 4038.550 kb on - strand at 4038.564 kb on + strand at 4038.564 kb on + strand at 4038.596 kb on + strand, within AO353_18315 at 4038.596 kb on + strand, within AO353_18315 at 4038.596 kb on + strand, within AO353_18315 at 4038.596 kb on + strand, within AO353_18315 at 4038.596 kb on + strand, within AO353_18315 at 4038.597 kb on - strand, within AO353_18315 at 4038.597 kb on - strand, within AO353_18315 at 4038.597 kb on - strand, within AO353_18315 at 4038.597 kb on - strand, within AO353_18315 at 4038.597 kb on - strand, within AO353_18315 at 4038.597 kb on - strand, within AO353_18315 at 4038.599 kb on + strand, within AO353_18315 at 4038.599 kb on + strand, within AO353_18315 at 4038.599 kb on + strand, within AO353_18315 at 4038.599 kb on + strand, within AO353_18315 at 4038.599 kb on + strand, within AO353_18315 at 4038.599 kb on + strand, within AO353_18315 at 4038.599 kb on + strand, within AO353_18315 at 4038.599 kb on + strand, within AO353_18315 at 4038.599 kb on + strand, within AO353_18315 at 4038.599 kb on + strand, within AO353_18315 at 4038.599 kb on + strand, within AO353_18315 at 4038.599 kb on + strand, within AO353_18315 at 4038.599 kb on + strand, within AO353_18315 at 4038.599 kb on + strand, within AO353_18315 at 4038.600 kb on - strand, within AO353_18315 at 4038.600 kb on - strand, within AO353_18315 at 4038.600 kb on - strand, within AO353_18315 at 4038.600 kb on - strand, within AO353_18315 at 4038.600 kb on - strand, within AO353_18315 at 4038.600 kb on - strand, within AO353_18315 at 4038.600 kb on - strand, within AO353_18315 at 4038.600 kb on - strand, within AO353_18315 at 4038.600 kb on - strand, within AO353_18315 at 4038.600 kb on - strand, within AO353_18315 at 4038.600 kb on - strand, within AO353_18315 at 4038.600 kb on - strand, within AO353_18315 at 4038.600 kb on - strand, within AO353_18315 at 4038.600 kb on - strand, within AO353_18315 at 4038.600 kb on - strand, within AO353_18315 at 4038.600 kb on - strand, within AO353_18315 at 4038.600 kb on - strand, within AO353_18315 at 4038.638 kb on - strand, within AO353_18315 at 4038.641 kb on + strand, within AO353_18315 at 4038.642 kb on - strand, within AO353_18315 at 4038.754 kb on + strand, within AO353_18315 at 4038.755 kb on - strand, within AO353_18315 at 4038.789 kb on - strand, within AO353_18315 at 4038.812 kb on + strand, within AO353_18315 at 4038.812 kb on + strand, within AO353_18315 at 4038.813 kb on - strand, within AO353_18315 at 4038.813 kb on - strand, within AO353_18315 at 4038.813 kb on - strand, within AO353_18315 at 4038.871 kb on + strand, within AO353_18315 at 4038.871 kb on + strand, within AO353_18315 at 4038.871 kb on + strand, within AO353_18315 at 4038.871 kb on + strand, within AO353_18315 at 4038.871 kb on + strand, within AO353_18315 at 4038.871 kb on + strand, within AO353_18315 at 4038.871 kb on + strand, within AO353_18315 at 4038.872 kb on - strand, within AO353_18315 at 4038.872 kb on - strand, within AO353_18315 at 4038.872 kb on - strand, within AO353_18315 at 4038.963 kb on + strand, within AO353_18315 at 4038.998 kb on - strand, within AO353_18315 at 4038.998 kb on - strand, within AO353_18315 at 4039.033 kb on + strand, within AO353_18315 at 4039.034 kb on - strand, within AO353_18315 at 4039.034 kb on - strand, within AO353_18315 at 4039.034 kb on - strand, within AO353_18315 at 4039.055 kb on + strand, within AO353_18315 at 4039.055 kb on + strand, within AO353_18315 at 4039.058 kb on - strand at 4039.064 kb on - strand at 4039.079 kb on - strand at 4039.099 kb on + strand at 4039.112 kb on + strand at 4039.386 kb on + strand, within AO353_18320 at 4039.386 kb on + strand, within AO353_18320 at 4039.401 kb on + strand, within AO353_18320 at 4039.402 kb on - strand, within AO353_18320 at 4039.402 kb on - strand, within AO353_18320 at 4039.437 kb on - strand, within AO353_18320 at 4039.437 kb on - strand, within AO353_18320 at 4039.440 kb on + strand, within AO353_18320 at 4039.441 kb on - strand, within AO353_18320 at 4039.444 kb on - strand, within AO353_18320 at 4039.469 kb on - strand, within AO353_18320 at 4039.535 kb on + strand, within AO353_18320 at 4039.535 kb on + strand, within AO353_18320 at 4039.536 kb on - strand, within AO353_18320 at 4039.608 kb on + strand, within AO353_18320 at 4039.608 kb on + strand, within AO353_18320 at 4039.611 kb on + strand, within AO353_18320 at 4039.612 kb on - strand, within AO353_18320 at 4039.662 kb on + strand at 4039.662 kb on + strand at 4039.663 kb on - strand at 4039.716 kb on + strand at 4039.716 kb on + strand at 4039.717 kb on - strand at 4039.717 kb on - strand at 4039.797 kb on - strand at 4039.809 kb on + strand at 4039.822 kb on - strand at 4039.931 kb on + strand at 4039.931 kb on + strand at 4039.932 kb on - strand at 4039.962 kb on - strand at 4039.995 kb on + strand at 4039.995 kb on + strand at 4039.996 kb on - strand at 4040.075 kb on + strand, within AO353_18325 at 4040.075 kb on + strand, within AO353_18325 at 4040.225 kb on + strand, within AO353_18325 at 4040.226 kb on - strand, within AO353_18325 at 4040.226 kb on - strand, within AO353_18325 at 4040.229 kb on + strand, within AO353_18325 at 4040.417 kb on - strand at 4040.480 kb on + strand at 4040.481 kb on - strand at 4040.481 kb on - strand at 4040.481 kb on - strand at 4040.485 kb on - strand at 4040.513 kb on - strand at 4040.552 kb on + strand at 4040.552 kb on + strand at 4040.574 kb on + strand at 4040.574 kb on + strand at 4040.575 kb on - strand at 4040.578 kb on + strand at 4040.578 kb on + strand at 4040.578 kb on + strand at 4040.578 kb on + strand at 4040.578 kb on + strand at 4040.578 kb on + strand at 4040.578 kb on + strand at 4040.578 kb on + strand at 4040.578 kb on + strand at 4040.578 kb on + strand at 4040.578 kb on + strand at 4040.578 kb on + strand at 4040.578 kb on + strand at 4040.578 kb on + strand at 4040.579 kb on - strand at 4040.579 kb on - strand at 4040.579 kb on - strand at 4040.579 kb on - strand at 4040.638 kb on + strand at 4040.638 kb on + strand at 4040.638 kb on + strand at 4040.638 kb on + strand at 4040.638 kb on + strand at 4040.638 kb on + strand at 4040.639 kb on - strand at 4040.639 kb on - strand at 4040.639 kb on - strand at 4040.639 kb on - strand at 4040.639 kb on - strand at 4040.663 kb on + strand at 4040.663 kb on + strand at 4040.663 kb on + strand at 4040.663 kb on + strand at 4040.663 kb on + strand at 4040.663 kb on + strand at 4040.664 kb on - strand at 4040.664 kb on - strand at 4040.664 kb on - strand at 4040.680 kb on + strand at 4040.680 kb on + strand at 4040.680 kb on + strand at 4040.680 kb on + strand at 4040.680 kb on + strand at 4040.681 kb on - strand at 4040.681 kb on - strand at 4040.687 kb on + strand at 4040.687 kb on + strand at 4040.688 kb on - strand at 4040.688 kb on - strand at 4040.688 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 4,038,257 + -1.8 4,038,257 + -0.5 4,038,257 + +0.2 4,038,257 + -0.0 4,038,257 + -0.4 4,038,257 + -1.3 4,038,257 + -0.4 4,038,257 + -1.1 4,038,257 + -0.1 4,038,258 - -0.8 4,038,258 - +0.4 4,038,258 - -0.7 4,038,258 - +0.8 4,038,258 - -0.5 4,038,260 + -1.6 4,038,260 + -1.0 4,038,260 + -0.2 4,038,260 + -1.8 4,038,260 + +0.8 4,038,260 + -0.5 4,038,260 + +0.6 4,038,261 - -0.9 4,038,261 - -1.0 4,038,261 - -0.4 4,038,261 - -1.0 4,038,261 - -0.3 4,038,261 - -1.1 4,038,261 - +0.1 4,038,261 - +0.4 4,038,261 - -1.8 4,038,275 + -1.0 4,038,275 + -0.5 4,038,275 + -0.7 4,038,276 - +1.0 4,038,358 + +0.1 4,038,358 + -0.4 4,038,358 + +1.7 4,038,358 + -0.1 4,038,358 + +2.1 4,038,358 + +0.4 4,038,358 + +0.2 4,038,358 + -0.2 4,038,358 + +0.0 4,038,358 + +0.6 4,038,358 + +3.5 4,038,359 - +0.1 4,038,359 - -0.1 4,038,359 - -0.7 4,038,359 - -1.4 4,038,359 - -0.1 4,038,359 - -1.4 4,038,359 - -0.8 4,038,359 - -1.4 4,038,359 - -0.7 4,038,359 - -0.7 4,038,359 - -0.6 4,038,359 - -0.4 4,038,359 - +0.3 4,038,362 + -0.6 4,038,362 + -2.5 4,038,362 + -0.0 4,038,362 + +0.4 4,038,362 + +1.6 4,038,362 + -0.5 4,038,362 + +0.6 4,038,363 - -0.1 4,038,363 - -2.2 4,038,363 - -0.2 4,038,363 - +0.3 4,038,363 - +0.1 4,038,386 + +0.9 4,038,485 - +0.9 4,038,498 + -0.9 4,038,498 + +0.9 4,038,498 + -0.3 4,038,499 - -0.1 4,038,503 + -0.4 4,038,504 - +1.2 4,038,550 - -0.1 4,038,564 + -0.5 4,038,564 + +0.2 4,038,596 + AO353_18315 0.11 -0.7 4,038,596 + AO353_18315 0.11 +1.3 4,038,596 + AO353_18315 0.11 -1.2 4,038,596 + AO353_18315 0.11 -1.7 4,038,596 + AO353_18315 0.11 -0.4 4,038,597 - AO353_18315 0.11 +0.3 4,038,597 - AO353_18315 0.11 -0.6 4,038,597 - AO353_18315 0.11 +0.3 4,038,597 - AO353_18315 0.11 -0.4 4,038,597 - AO353_18315 0.11 -0.9 4,038,597 - AO353_18315 0.11 -1.2 4,038,599 + AO353_18315 0.11 +0.7 4,038,599 + AO353_18315 0.11 -0.2 4,038,599 + AO353_18315 0.11 -1.1 4,038,599 + AO353_18315 0.11 -1.2 4,038,599 + AO353_18315 0.11 +0.9 4,038,599 + AO353_18315 0.11 +1.1 4,038,599 + AO353_18315 0.11 -0.7 4,038,599 + AO353_18315 0.11 -0.5 4,038,599 + AO353_18315 0.11 +0.9 4,038,599 + AO353_18315 0.11 +0.5 4,038,599 + AO353_18315 0.11 +1.3 4,038,599 + AO353_18315 0.11 -0.5 4,038,599 + AO353_18315 0.11 +0.3 4,038,599 + AO353_18315 0.11 +0.2 4,038,600 - AO353_18315 0.12 +3.4 4,038,600 - AO353_18315 0.12 -0.9 4,038,600 - AO353_18315 0.12 -0.3 4,038,600 - AO353_18315 0.12 -0.7 4,038,600 - AO353_18315 0.12 +0.1 4,038,600 - AO353_18315 0.12 +1.5 4,038,600 - AO353_18315 0.12 -0.1 4,038,600 - AO353_18315 0.12 +0.9 4,038,600 - AO353_18315 0.12 +0.9 4,038,600 - AO353_18315 0.12 +0.4 4,038,600 - AO353_18315 0.12 -0.9 4,038,600 - AO353_18315 0.12 -0.5 4,038,600 - AO353_18315 0.12 +1.1 4,038,600 - AO353_18315 0.12 +0.3 4,038,600 - AO353_18315 0.12 -0.4 4,038,600 - AO353_18315 0.12 +0.4 4,038,600 - AO353_18315 0.12 +0.8 4,038,638 - AO353_18315 0.18 +2.4 4,038,641 + AO353_18315 0.19 -1.0 4,038,642 - AO353_18315 0.19 -0.8 4,038,754 + AO353_18315 0.38 -0.9 4,038,755 - AO353_18315 0.38 +0.1 4,038,789 - AO353_18315 0.44 -0.1 4,038,812 + AO353_18315 0.48 -0.2 4,038,812 + AO353_18315 0.48 -1.6 4,038,813 - AO353_18315 0.48 -0.4 4,038,813 - AO353_18315 0.48 -0.4 4,038,813 - AO353_18315 0.48 +0.3 4,038,871 + AO353_18315 0.58 +0.1 4,038,871 + AO353_18315 0.58 -0.6 4,038,871 + AO353_18315 0.58 -0.3 4,038,871 + AO353_18315 0.58 +0.8 4,038,871 + AO353_18315 0.58 -0.6 4,038,871 + AO353_18315 0.58 -0.1 4,038,871 + AO353_18315 0.58 +1.3 4,038,872 - AO353_18315 0.58 +0.1 4,038,872 - AO353_18315 0.58 +1.3 4,038,872 - AO353_18315 0.58 +0.2 4,038,963 + AO353_18315 0.74 -0.8 4,038,998 - AO353_18315 0.80 +0.6 4,038,998 - AO353_18315 0.80 +0.6 4,039,033 + AO353_18315 0.86 +0.3 4,039,034 - AO353_18315 0.86 +4.4 4,039,034 - AO353_18315 0.86 +0.1 4,039,034 - AO353_18315 0.86 -1.4 4,039,055 + AO353_18315 0.90 +0.8 4,039,055 + AO353_18315 0.90 -1.5 4,039,058 - +1.1 4,039,064 - -0.2 4,039,079 - +0.1 4,039,099 + +0.3 4,039,112 + +0.3 4,039,386 + AO353_18320 0.30 +0.4 4,039,386 + AO353_18320 0.30 +0.9 4,039,401 + AO353_18320 0.33 +1.3 4,039,402 - AO353_18320 0.33 -0.7 4,039,402 - AO353_18320 0.33 -0.5 4,039,437 - AO353_18320 0.41 -0.4 4,039,437 - AO353_18320 0.41 -0.5 4,039,440 + AO353_18320 0.42 -0.2 4,039,441 - AO353_18320 0.42 +0.1 4,039,444 - AO353_18320 0.43 +0.7 4,039,469 - AO353_18320 0.48 +0.1 4,039,535 + AO353_18320 0.63 +0.3 4,039,535 + AO353_18320 0.63 -1.6 4,039,536 - AO353_18320 0.63 -0.6 4,039,608 + AO353_18320 0.80 +0.8 4,039,608 + AO353_18320 0.80 -0.7 4,039,611 + AO353_18320 0.80 -0.5 4,039,612 - AO353_18320 0.80 +0.1 4,039,662 + +0.3 4,039,662 + -0.3 4,039,663 - +2.4 4,039,716 + -2.4 4,039,716 + -0.6 4,039,717 - -0.7 4,039,717 - -1.9 4,039,797 - +0.3 4,039,809 + +1.1 4,039,822 - +0.1 4,039,931 + +0.2 4,039,931 + -0.5 4,039,932 - -0.7 4,039,962 - +0.1 4,039,995 + -2.0 4,039,995 + -0.9 4,039,996 - +0.6 4,040,075 + AO353_18325 0.16 -1.6 4,040,075 + AO353_18325 0.16 -0.5 4,040,225 + AO353_18325 0.55 +0.5 4,040,226 - AO353_18325 0.55 -0.1 4,040,226 - AO353_18325 0.55 +2.2 4,040,229 + AO353_18325 0.56 +0.1 4,040,417 - +0.1 4,040,480 + -0.5 4,040,481 - -0.8 4,040,481 - +0.2 4,040,481 - +0.2 4,040,485 - -0.7 4,040,513 - -1.0 4,040,552 + -0.7 4,040,552 + -1.7 4,040,574 + -0.2 4,040,574 + +0.2 4,040,575 - +0.3 4,040,578 + -1.2 4,040,578 + +0.2 4,040,578 + +0.3 4,040,578 + -0.9 4,040,578 + +0.7 4,040,578 + -0.1 4,040,578 + +0.3 4,040,578 + -2.6 4,040,578 + -1.1 4,040,578 + +0.8 4,040,578 + +0.8 4,040,578 + -0.0 4,040,578 + +1.1 4,040,578 + +2.1 4,040,579 - -0.3 4,040,579 - +0.3 4,040,579 - +0.4 4,040,579 - -0.1 4,040,638 + +1.4 4,040,638 + +1.8 4,040,638 + -0.2 4,040,638 + +0.9 4,040,638 + +0.1 4,040,638 + -1.1 4,040,639 - -0.6 4,040,639 - -1.2 4,040,639 - -1.7 4,040,639 - -0.3 4,040,639 - -0.2 4,040,663 + -0.7 4,040,663 + -0.2 4,040,663 + +0.4 4,040,663 + +0.0 4,040,663 + -0.3 4,040,663 + -0.4 4,040,664 - +0.9 4,040,664 - -0.6 4,040,664 - -0.2 4,040,680 + +0.3 4,040,680 + +0.5 4,040,680 + +0.0 4,040,680 + -0.7 4,040,680 + -1.2 4,040,681 - -0.7 4,040,681 - -0.4 4,040,687 + +0.8 4,040,687 + -0.4 4,040,688 - +0.3 4,040,688 - -0.7 4,040,688 - +1.1
Or see this region's nucleotide sequence