Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_15815 and AO353_15820 are separated by 146 nucleotides AO353_15820 and AO353_15825 are separated by 2 nucleotides AO353_15825 and AO353_15830 are separated by 189 nucleotides
AO353_15815: AO353_15815 - inositol monophosphatase, at 3,494,081 to 3,494,899
_15815
AO353_15820: AO353_15820 - RNA methyltransferase, at 3,495,046 to 3,495,816
_15820
AO353_15825: AO353_15825 - serine acetyltransferase, at 3,495,819 to 3,496,595
_15825
AO353_15830: AO353_15830 - transcriptional regulator, at 3,496,785 to 3,497,276
_15830
Position (kb)
3495
3496 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3494.941 kb on - strand at 3494.982 kb on + strand at 3494.982 kb on + strand at 3494.983 kb on - strand at 3494.983 kb on - strand at 3494.993 kb on + strand at 3495.006 kb on - strand at 3495.006 kb on - strand at 3495.020 kb on - strand at 3495.020 kb on - strand at 3495.020 kb on - strand at 3495.436 kb on + strand, within AO353_15820 at 3495.508 kb on + strand, within AO353_15820 at 3495.508 kb on + strand, within AO353_15820 at 3495.508 kb on + strand, within AO353_15820 at 3495.508 kb on + strand, within AO353_15820 at 3495.508 kb on + strand, within AO353_15820 at 3495.509 kb on - strand, within AO353_15820 at 3495.509 kb on - strand, within AO353_15820 at 3495.509 kb on - strand, within AO353_15820 at 3495.509 kb on - strand, within AO353_15820 at 3495.509 kb on - strand, within AO353_15820 at 3495.509 kb on - strand, within AO353_15820 at 3495.509 kb on - strand, within AO353_15820 at 3495.625 kb on + strand, within AO353_15820 at 3495.625 kb on + strand, within AO353_15820 at 3495.625 kb on + strand, within AO353_15820 at 3495.625 kb on + strand, within AO353_15820 at 3495.625 kb on + strand, within AO353_15820 at 3495.625 kb on + strand, within AO353_15820 at 3495.625 kb on + strand, within AO353_15820 at 3495.625 kb on + strand, within AO353_15820 at 3495.626 kb on - strand, within AO353_15820 at 3495.626 kb on - strand, within AO353_15820 at 3495.626 kb on - strand, within AO353_15820 at 3495.626 kb on - strand, within AO353_15820 at 3495.626 kb on - strand, within AO353_15820 at 3495.626 kb on - strand, within AO353_15820 at 3495.626 kb on - strand, within AO353_15820 at 3495.626 kb on - strand, within AO353_15820 at 3495.626 kb on - strand, within AO353_15820 at 3495.712 kb on + strand, within AO353_15820 at 3495.712 kb on + strand, within AO353_15820 at 3495.713 kb on - strand, within AO353_15820 at 3495.713 kb on - strand, within AO353_15820 at 3495.713 kb on - strand, within AO353_15820 at 3495.747 kb on + strand at 3495.747 kb on + strand at 3495.747 kb on + strand at 3495.748 kb on - strand at 3495.748 kb on - strand at 3495.801 kb on + strand at 3495.802 kb on - strand at 3495.802 kb on - strand at 3495.802 kb on - strand at 3495.802 kb on - strand at 3495.842 kb on + strand at 3495.842 kb on + strand at 3495.843 kb on - strand at 3495.878 kb on + strand at 3495.878 kb on + strand at 3495.878 kb on + strand at 3495.878 kb on + strand at 3495.878 kb on + strand at 3495.878 kb on + strand at 3495.878 kb on + strand at 3495.879 kb on - strand at 3495.879 kb on - strand at 3495.879 kb on - strand at 3496.055 kb on + strand, within AO353_15825 at 3496.056 kb on - strand, within AO353_15825 at 3496.056 kb on - strand, within AO353_15825 at 3496.119 kb on + strand, within AO353_15825 at 3496.120 kb on - strand, within AO353_15825 at 3496.189 kb on + strand, within AO353_15825 at 3496.190 kb on - strand, within AO353_15825 at 3496.190 kb on - strand, within AO353_15825 at 3496.390 kb on - strand, within AO353_15825 at 3496.515 kb on + strand, within AO353_15825 at 3496.516 kb on - strand, within AO353_15825 at 3496.593 kb on + strand at 3496.651 kb on + strand at 3496.651 kb on + strand at 3496.651 kb on + strand at 3496.651 kb on + strand at 3496.651 kb on + strand at 3496.651 kb on + strand at 3496.651 kb on + strand at 3496.651 kb on + strand at 3496.651 kb on + strand at 3496.651 kb on + strand at 3496.652 kb on - strand at 3496.652 kb on - strand at 3496.652 kb on - strand at 3496.668 kb on + strand at 3496.668 kb on + strand at 3496.668 kb on + strand at 3496.668 kb on + strand at 3496.668 kb on + strand at 3496.668 kb on + strand at 3496.669 kb on - strand at 3496.669 kb on - strand at 3496.669 kb on - strand at 3496.669 kb on - strand at 3496.670 kb on + strand at 3496.670 kb on + strand at 3496.670 kb on + strand at 3496.670 kb on + strand at 3496.671 kb on - strand at 3496.671 kb on - strand at 3496.671 kb on - strand at 3496.776 kb on + strand at 3496.776 kb on + strand at 3496.776 kb on + strand at 3496.796 kb on + strand at 3496.796 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 3,494,941 - -0.6 3,494,982 + -0.1 3,494,982 + -1.5 3,494,983 - +0.0 3,494,983 - +0.7 3,494,993 + -0.2 3,495,006 - -0.6 3,495,006 - +0.0 3,495,020 - -0.4 3,495,020 - -0.2 3,495,020 - -1.0 3,495,436 + AO353_15820 0.51 +0.3 3,495,508 + AO353_15820 0.60 -0.1 3,495,508 + AO353_15820 0.60 -2.0 3,495,508 + AO353_15820 0.60 +0.9 3,495,508 + AO353_15820 0.60 -2.2 3,495,508 + AO353_15820 0.60 +1.0 3,495,509 - AO353_15820 0.60 -1.1 3,495,509 - AO353_15820 0.60 -0.9 3,495,509 - AO353_15820 0.60 -0.1 3,495,509 - AO353_15820 0.60 +0.5 3,495,509 - AO353_15820 0.60 -1.0 3,495,509 - AO353_15820 0.60 -0.2 3,495,509 - AO353_15820 0.60 -1.7 3,495,625 + AO353_15820 0.75 -0.9 3,495,625 + AO353_15820 0.75 -1.6 3,495,625 + AO353_15820 0.75 -1.4 3,495,625 + AO353_15820 0.75 +0.8 3,495,625 + AO353_15820 0.75 -1.5 3,495,625 + AO353_15820 0.75 -0.8 3,495,625 + AO353_15820 0.75 -0.2 3,495,625 + AO353_15820 0.75 +0.6 3,495,626 - AO353_15820 0.75 -0.8 3,495,626 - AO353_15820 0.75 -0.1 3,495,626 - AO353_15820 0.75 -1.4 3,495,626 - AO353_15820 0.75 -1.4 3,495,626 - AO353_15820 0.75 -1.8 3,495,626 - AO353_15820 0.75 -1.6 3,495,626 - AO353_15820 0.75 -2.0 3,495,626 - AO353_15820 0.75 -0.0 3,495,626 - AO353_15820 0.75 -1.1 3,495,712 + AO353_15820 0.86 +0.5 3,495,712 + AO353_15820 0.86 -1.2 3,495,713 - AO353_15820 0.87 -0.3 3,495,713 - AO353_15820 0.87 -0.6 3,495,713 - AO353_15820 0.87 +0.4 3,495,747 + -2.4 3,495,747 + -0.9 3,495,747 + -0.6 3,495,748 - -0.8 3,495,748 - -0.5 3,495,801 + -0.5 3,495,802 - -2.9 3,495,802 - +0.8 3,495,802 - -1.4 3,495,802 - -1.5 3,495,842 + -0.1 3,495,842 + -0.3 3,495,843 - -0.7 3,495,878 + +0.5 3,495,878 + +1.1 3,495,878 + +0.1 3,495,878 + +0.3 3,495,878 + -0.0 3,495,878 + +0.1 3,495,878 + -0.1 3,495,879 - +0.7 3,495,879 - +0.5 3,495,879 - +0.6 3,496,055 + AO353_15825 0.30 +0.8 3,496,056 - AO353_15825 0.31 +0.1 3,496,056 - AO353_15825 0.31 +0.4 3,496,119 + AO353_15825 0.39 -1.4 3,496,120 - AO353_15825 0.39 +0.7 3,496,189 + AO353_15825 0.48 -1.6 3,496,190 - AO353_15825 0.48 +0.4 3,496,190 - AO353_15825 0.48 -0.1 3,496,390 - AO353_15825 0.73 -1.4 3,496,515 + AO353_15825 0.90 -1.7 3,496,516 - AO353_15825 0.90 +0.4 3,496,593 + -0.1 3,496,651 + +2.6 3,496,651 + +0.6 3,496,651 + +0.6 3,496,651 + +0.0 3,496,651 + +1.1 3,496,651 + +0.6 3,496,651 + -0.2 3,496,651 + +0.5 3,496,651 + +0.4 3,496,651 + -0.2 3,496,652 - +1.7 3,496,652 - -0.9 3,496,652 - +0.2 3,496,668 + -0.2 3,496,668 + -1.8 3,496,668 + -0.4 3,496,668 + +0.3 3,496,668 + -0.2 3,496,668 + -0.1 3,496,669 - +0.1 3,496,669 - +0.3 3,496,669 - +0.8 3,496,669 - -0.4 3,496,670 + -1.3 3,496,670 + +0.6 3,496,670 + +0.2 3,496,670 + +1.7 3,496,671 - +0.0 3,496,671 - +1.6 3,496,671 - +0.0 3,496,776 + +0.0 3,496,776 + -2.5 3,496,776 + -2.2 3,496,796 + -1.2 3,496,796 + -3.1
Or see this region's nucleotide sequence