Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_10475 and AO353_10480 are separated by 20 nucleotides AO353_10480 and AO353_10485 are separated by 4 nucleotides
AO353_10475: AO353_10475 - DNA polymerase III subunit beta, at 2,295,586 to 2,296,689
_10475
AO353_10480: AO353_10480 - recombinase RecF, at 2,296,710 to 2,297,813
_10480
AO353_10485: AO353_10485 - DNA gyrase subunit B, at 2,297,818 to 2,300,235
_10485
Position (kb)
2296
2297
2298 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2296.687 kb on + strand at 2296.687 kb on + strand at 2296.687 kb on + strand at 2296.688 kb on - strand at 2296.707 kb on + strand at 2296.707 kb on + strand at 2296.707 kb on + strand at 2296.707 kb on + strand at 2296.707 kb on + strand at 2296.707 kb on + strand at 2296.707 kb on + strand at 2296.708 kb on - strand at 2296.708 kb on - strand at 2296.708 kb on - strand at 2296.708 kb on - strand at 2296.708 kb on - strand at 2296.708 kb on - strand at 2296.708 kb on - strand at 2296.708 kb on - strand at 2296.708 kb on - strand at 2296.708 kb on - strand at 2296.787 kb on + strand at 2296.794 kb on + strand at 2296.869 kb on - strand, within AO353_10480 at 2296.882 kb on + strand, within AO353_10480 at 2296.882 kb on + strand, within AO353_10480 at 2296.882 kb on + strand, within AO353_10480 at 2296.882 kb on + strand, within AO353_10480 at 2296.882 kb on + strand, within AO353_10480 at 2296.882 kb on + strand, within AO353_10480 at 2296.882 kb on + strand, within AO353_10480 at 2296.882 kb on + strand, within AO353_10480 at 2296.883 kb on - strand, within AO353_10480 at 2296.883 kb on - strand, within AO353_10480 at 2296.896 kb on + strand, within AO353_10480 at 2296.897 kb on - strand, within AO353_10480 at 2296.906 kb on + strand, within AO353_10480 at 2297.216 kb on + strand, within AO353_10480 at 2297.216 kb on + strand, within AO353_10480 at 2297.216 kb on + strand, within AO353_10480 at 2297.216 kb on + strand, within AO353_10480 at 2297.298 kb on + strand, within AO353_10480 at 2297.298 kb on + strand, within AO353_10480 at 2297.298 kb on + strand, within AO353_10480 at 2297.298 kb on + strand, within AO353_10480 at 2297.298 kb on + strand, within AO353_10480 at 2297.298 kb on + strand, within AO353_10480 at 2297.298 kb on + strand, within AO353_10480 at 2297.300 kb on + strand, within AO353_10480 at 2297.300 kb on + strand, within AO353_10480 at 2297.300 kb on + strand, within AO353_10480 at 2297.300 kb on + strand, within AO353_10480 at 2297.369 kb on + strand, within AO353_10480 at 2297.369 kb on + strand, within AO353_10480 at 2297.369 kb on + strand, within AO353_10480 at 2297.369 kb on + strand, within AO353_10480 at 2297.369 kb on + strand, within AO353_10480 at 2297.369 kb on + strand, within AO353_10480 at 2297.369 kb on + strand, within AO353_10480 at 2297.369 kb on + strand, within AO353_10480 at 2297.369 kb on + strand, within AO353_10480 at 2297.369 kb on + strand, within AO353_10480 at 2297.373 kb on + strand, within AO353_10480 at 2297.373 kb on + strand, within AO353_10480 at 2297.373 kb on + strand, within AO353_10480 at 2297.373 kb on + strand, within AO353_10480 at 2297.373 kb on + strand, within AO353_10480 at 2297.373 kb on + strand, within AO353_10480 at 2297.373 kb on + strand, within AO353_10480 at 2297.373 kb on + strand, within AO353_10480 at 2297.373 kb on + strand, within AO353_10480 at 2297.373 kb on + strand, within AO353_10480 at 2297.606 kb on + strand, within AO353_10480 at 2297.606 kb on + strand, within AO353_10480 at 2297.606 kb on + strand, within AO353_10480 at 2297.606 kb on + strand, within AO353_10480 at 2297.606 kb on + strand, within AO353_10480 at 2297.606 kb on + strand, within AO353_10480 at 2297.606 kb on + strand, within AO353_10480 at 2297.606 kb on + strand, within AO353_10480 at 2297.606 kb on + strand, within AO353_10480 at 2297.610 kb on + strand, within AO353_10480 at 2297.610 kb on + strand, within AO353_10480 at 2297.610 kb on + strand, within AO353_10480 at 2297.610 kb on + strand, within AO353_10480 at 2297.683 kb on + strand, within AO353_10480 at 2297.683 kb on + strand, within AO353_10480 at 2297.683 kb on + strand, within AO353_10480 at 2297.683 kb on + strand, within AO353_10480 at 2297.683 kb on + strand, within AO353_10480 at 2297.683 kb on + strand, within AO353_10480 at 2297.683 kb on + strand, within AO353_10480 at 2297.683 kb on + strand, within AO353_10480 at 2297.699 kb on + strand, within AO353_10480 at 2297.699 kb on + strand, within AO353_10480 at 2297.710 kb on + strand at 2297.710 kb on + strand at 2297.710 kb on + strand at 2297.710 kb on + strand at 2297.710 kb on + strand at 2297.710 kb on + strand at 2297.710 kb on + strand at 2297.710 kb on + strand at 2297.710 kb on + strand at 2297.710 kb on + strand at 2297.710 kb on + strand at 2297.710 kb on + strand at 2297.710 kb on + strand at 2297.710 kb on + strand at 2297.722 kb on + strand at 2297.722 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 2,296,687 + -0.5 2,296,687 + +0.2 2,296,687 + -0.6 2,296,688 - +0.8 2,296,707 + -0.5 2,296,707 + -0.5 2,296,707 + -0.9 2,296,707 + -2.0 2,296,707 + +1.1 2,296,707 + -0.4 2,296,707 + -1.2 2,296,708 - -1.8 2,296,708 - -0.7 2,296,708 - +1.0 2,296,708 - -0.9 2,296,708 - -1.1 2,296,708 - -0.3 2,296,708 - -0.2 2,296,708 - -0.1 2,296,708 - -0.2 2,296,708 - -1.7 2,296,787 + +1.4 2,296,794 + -0.7 2,296,869 - AO353_10480 0.14 -0.5 2,296,882 + AO353_10480 0.16 +1.2 2,296,882 + AO353_10480 0.16 -0.2 2,296,882 + AO353_10480 0.16 +0.3 2,296,882 + AO353_10480 0.16 -0.5 2,296,882 + AO353_10480 0.16 -0.1 2,296,882 + AO353_10480 0.16 +0.4 2,296,882 + AO353_10480 0.16 +1.0 2,296,882 + AO353_10480 0.16 -1.0 2,296,883 - AO353_10480 0.16 -0.6 2,296,883 - AO353_10480 0.16 -0.4 2,296,896 + AO353_10480 0.17 +0.8 2,296,897 - AO353_10480 0.17 -0.3 2,296,906 + AO353_10480 0.18 -0.6 2,297,216 + AO353_10480 0.46 -0.5 2,297,216 + AO353_10480 0.46 -1.2 2,297,216 + AO353_10480 0.46 +0.4 2,297,216 + AO353_10480 0.46 -1.8 2,297,298 + AO353_10480 0.53 +0.2 2,297,298 + AO353_10480 0.53 -1.5 2,297,298 + AO353_10480 0.53 -0.6 2,297,298 + AO353_10480 0.53 -1.4 2,297,298 + AO353_10480 0.53 +1.5 2,297,298 + AO353_10480 0.53 +0.7 2,297,298 + AO353_10480 0.53 -0.4 2,297,300 + AO353_10480 0.53 -0.7 2,297,300 + AO353_10480 0.53 -1.8 2,297,300 + AO353_10480 0.53 +0.2 2,297,300 + AO353_10480 0.53 -0.4 2,297,369 + AO353_10480 0.60 -1.2 2,297,369 + AO353_10480 0.60 -1.5 2,297,369 + AO353_10480 0.60 -0.1 2,297,369 + AO353_10480 0.60 +0.3 2,297,369 + AO353_10480 0.60 -1.6 2,297,369 + AO353_10480 0.60 -1.1 2,297,369 + AO353_10480 0.60 +0.6 2,297,369 + AO353_10480 0.60 +0.7 2,297,369 + AO353_10480 0.60 -1.0 2,297,369 + AO353_10480 0.60 -0.4 2,297,373 + AO353_10480 0.60 -1.1 2,297,373 + AO353_10480 0.60 -1.2 2,297,373 + AO353_10480 0.60 +0.1 2,297,373 + AO353_10480 0.60 -1.1 2,297,373 + AO353_10480 0.60 -0.9 2,297,373 + AO353_10480 0.60 -0.2 2,297,373 + AO353_10480 0.60 -0.5 2,297,373 + AO353_10480 0.60 -0.3 2,297,373 + AO353_10480 0.60 +1.2 2,297,373 + AO353_10480 0.60 -1.4 2,297,606 + AO353_10480 0.81 -0.7 2,297,606 + AO353_10480 0.81 -0.9 2,297,606 + AO353_10480 0.81 +0.4 2,297,606 + AO353_10480 0.81 +0.1 2,297,606 + AO353_10480 0.81 -0.0 2,297,606 + AO353_10480 0.81 +0.8 2,297,606 + AO353_10480 0.81 +1.2 2,297,606 + AO353_10480 0.81 -2.4 2,297,606 + AO353_10480 0.81 -0.5 2,297,610 + AO353_10480 0.82 +0.5 2,297,610 + AO353_10480 0.82 +0.5 2,297,610 + AO353_10480 0.82 -1.1 2,297,610 + AO353_10480 0.82 -0.4 2,297,683 + AO353_10480 0.88 -0.2 2,297,683 + AO353_10480 0.88 +0.0 2,297,683 + AO353_10480 0.88 -1.7 2,297,683 + AO353_10480 0.88 -1.7 2,297,683 + AO353_10480 0.88 -2.4 2,297,683 + AO353_10480 0.88 -0.0 2,297,683 + AO353_10480 0.88 -2.4 2,297,683 + AO353_10480 0.88 -0.2 2,297,699 + AO353_10480 0.90 -1.2 2,297,699 + AO353_10480 0.90 -1.7 2,297,710 + -0.5 2,297,710 + -0.5 2,297,710 + -0.0 2,297,710 + -1.0 2,297,710 + -1.7 2,297,710 + -0.9 2,297,710 + -2.9 2,297,710 + -0.4 2,297,710 + -0.5 2,297,710 + +0.8 2,297,710 + -0.3 2,297,710 + +0.6 2,297,710 + -0.5 2,297,710 + +1.1 2,297,722 + +0.1 2,297,722 + -1.6
Or see this region's nucleotide sequence