Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00755 and AO353_00760 are separated by 212 nucleotides AO353_00760 and AO353_00765 are separated by 234 nucleotides AO353_00765 and AO353_00770 are separated by 166 nucleotides
AO353_00755: AO353_00755 - hypothetical protein, at 166,328 to 167,521
_00755
AO353_00760: AO353_00760 - hypothetical protein, at 167,734 to 168,078
_00760
AO353_00765: AO353_00765 - D-alanyl-D-alanine carboxypeptidase, at 168,313 to 169,773
_00765
AO353_00770: AO353_00770 - nucleotide cyclase, at 169,940 to 172,339
_00770
Position (kb) 168
169
170 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 167.337 kb on + strand, within AO353_00755 at 167.361 kb on + strand, within AO353_00755 at 167.362 kb on - strand, within AO353_00755 at 167.362 kb on - strand, within AO353_00755 at 167.371 kb on + strand, within AO353_00755 at 167.413 kb on + strand at 167.413 kb on + strand at 167.413 kb on + strand at 167.414 kb on - strand at 167.414 kb on - strand at 167.414 kb on - strand at 167.414 kb on - strand at 167.485 kb on + strand at 167.485 kb on + strand at 167.485 kb on + strand at 167.485 kb on + strand at 167.485 kb on + strand at 167.485 kb on + strand at 167.485 kb on + strand at 167.486 kb on - strand at 167.486 kb on - strand at 167.486 kb on - strand at 167.486 kb on - strand at 167.519 kb on + strand at 167.520 kb on - strand at 167.578 kb on + strand at 167.578 kb on + strand at 167.578 kb on + strand at 167.578 kb on + strand at 167.578 kb on + strand at 167.578 kb on + strand at 167.578 kb on + strand at 167.578 kb on + strand at 167.578 kb on + strand at 167.578 kb on + strand at 167.578 kb on + strand at 167.578 kb on + strand at 167.579 kb on - strand at 167.579 kb on - strand at 167.579 kb on - strand at 167.579 kb on - strand at 167.579 kb on - strand at 167.579 kb on - strand at 167.586 kb on + strand at 167.586 kb on + strand at 167.587 kb on - strand at 167.587 kb on - strand at 167.587 kb on - strand at 167.587 kb on - strand at 167.587 kb on - strand at 167.663 kb on + strand at 167.794 kb on + strand, within AO353_00760 at 167.794 kb on + strand, within AO353_00760 at 167.794 kb on + strand, within AO353_00760 at 167.794 kb on + strand, within AO353_00760 at 167.794 kb on + strand, within AO353_00760 at 167.795 kb on - strand, within AO353_00760 at 167.795 kb on - strand, within AO353_00760 at 167.892 kb on - strand, within AO353_00760 at 168.070 kb on - strand at 168.097 kb on + strand at 168.098 kb on - strand at 168.115 kb on + strand at 168.115 kb on + strand at 168.124 kb on - strand at 168.124 kb on - strand at 168.124 kb on - strand at 168.228 kb on + strand at 168.262 kb on + strand at 168.262 kb on + strand at 168.263 kb on - strand at 168.263 kb on - strand at 168.297 kb on + strand at 168.305 kb on + strand at 168.305 kb on + strand at 168.456 kb on - strand at 168.552 kb on + strand, within AO353_00765 at 168.552 kb on + strand, within AO353_00765 at 168.553 kb on - strand, within AO353_00765 at 168.553 kb on - strand, within AO353_00765 at 168.556 kb on + strand, within AO353_00765 at 168.557 kb on - strand, within AO353_00765 at 168.607 kb on + strand, within AO353_00765 at 168.607 kb on + strand, within AO353_00765 at 168.652 kb on + strand, within AO353_00765 at 168.652 kb on + strand, within AO353_00765 at 168.652 kb on + strand, within AO353_00765 at 168.811 kb on - strand, within AO353_00765 at 168.881 kb on + strand, within AO353_00765 at 168.882 kb on - strand, within AO353_00765 at 168.882 kb on - strand, within AO353_00765 at 168.882 kb on - strand, within AO353_00765 at 168.882 kb on - strand, within AO353_00765 at 168.936 kb on + strand, within AO353_00765 at 168.936 kb on + strand, within AO353_00765 at 168.997 kb on + strand, within AO353_00765 at 168.998 kb on - strand, within AO353_00765 at 168.998 kb on - strand, within AO353_00765 at 168.998 kb on - strand, within AO353_00765 at 169.078 kb on + strand, within AO353_00765 at 169.078 kb on + strand, within AO353_00765 at 169.078 kb on + strand, within AO353_00765 at 169.078 kb on + strand, within AO353_00765 at 169.078 kb on + strand, within AO353_00765 at 169.079 kb on - strand, within AO353_00765 at 169.079 kb on - strand, within AO353_00765 at 169.105 kb on + strand, within AO353_00765 at 169.105 kb on + strand, within AO353_00765 at 169.105 kb on + strand, within AO353_00765 at 169.105 kb on + strand, within AO353_00765 at 169.106 kb on - strand, within AO353_00765 at 169.106 kb on - strand, within AO353_00765 at 169.106 kb on - strand, within AO353_00765 at 169.106 kb on - strand, within AO353_00765 at 169.106 kb on - strand, within AO353_00765 at 169.199 kb on + strand, within AO353_00765 at 169.200 kb on - strand, within AO353_00765 at 169.255 kb on + strand, within AO353_00765 at 169.255 kb on + strand, within AO353_00765 at 169.255 kb on + strand at 169.255 kb on + strand, within AO353_00765 at 169.255 kb on + strand, within AO353_00765 at 169.255 kb on + strand, within AO353_00765 at 169.255 kb on + strand, within AO353_00765 at 169.255 kb on + strand, within AO353_00765 at 169.255 kb on + strand, within AO353_00765 at 169.256 kb on - strand, within AO353_00765 at 169.256 kb on - strand, within AO353_00765 at 169.256 kb on - strand, within AO353_00765 at 169.256 kb on - strand, within AO353_00765 at 169.260 kb on + strand, within AO353_00765 at 169.260 kb on + strand, within AO353_00765 at 169.261 kb on - strand, within AO353_00765 at 169.306 kb on + strand, within AO353_00765 at 169.307 kb on - strand, within AO353_00765 at 169.307 kb on - strand, within AO353_00765 at 169.352 kb on + strand, within AO353_00765 at 169.701 kb on + strand at 169.702 kb on - strand at 169.776 kb on + strand at 169.776 kb on + strand at 169.776 kb on + strand at 169.777 kb on - strand at 169.777 kb on - strand at 169.852 kb on + strand at 169.852 kb on + strand at 169.852 kb on + strand at 169.852 kb on + strand at 169.852 kb on + strand at 169.853 kb on - strand at 169.853 kb on - strand at 169.853 kb on - strand at 169.853 kb on - strand at 170.095 kb on + strand at 170.095 kb on + strand at 170.095 kb on + strand at 170.095 kb on + strand at 170.095 kb on + strand at 170.095 kb on + strand at 170.096 kb on - strand at 170.096 kb on - strand at 170.114 kb on + strand at 170.114 kb on + strand at 170.115 kb on - strand at 170.115 kb on - strand at 170.131 kb on + strand at 170.131 kb on + strand at 170.131 kb on + strand at 170.132 kb on - strand at 170.132 kb on - strand at 170.132 kb on - strand at 170.132 kb on - strand at 170.132 kb on - strand at 170.132 kb on - strand at 170.274 kb on + strand, within AO353_00770 at 170.274 kb on + strand, within AO353_00770 at 170.275 kb on - strand, within AO353_00770 at 170.275 kb on - strand, within AO353_00770 at 170.275 kb on - strand, within AO353_00770 at 170.382 kb on + strand, within AO353_00770 at 170.383 kb on - strand, within AO353_00770 at 170.464 kb on + strand, within AO353_00770 at 170.475 kb on + strand, within AO353_00770 at 170.475 kb on + strand, within AO353_00770 at 170.475 kb on + strand, within AO353_00770 at 170.475 kb on + strand, within AO353_00770 at 170.476 kb on - strand, within AO353_00770 at 170.659 kb on + strand, within AO353_00770 at 170.659 kb on + strand, within AO353_00770 at 170.660 kb on - strand, within AO353_00770 at 170.660 kb on - strand, within AO353_00770 at 170.681 kb on + strand, within AO353_00770 at 170.681 kb on + strand, within AO353_00770 at 170.701 kb on - strand, within AO353_00770 at 170.701 kb on - strand, within AO353_00770 at 170.701 kb on - strand, within AO353_00770 at 170.727 kb on + strand, within AO353_00770 at 170.727 kb on + strand, within AO353_00770 at 170.727 kb on + strand, within AO353_00770 at 170.727 kb on + strand, within AO353_00770 at 170.727 kb on + strand, within AO353_00770 at 170.727 kb on + strand, within AO353_00770 at 170.728 kb on - strand, within AO353_00770 at 170.728 kb on - strand, within AO353_00770 at 170.728 kb on - strand, within AO353_00770 at 170.728 kb on - strand, within AO353_00770 at 170.728 kb on - strand, within AO353_00770 at 170.728 kb on - strand, within AO353_00770 at 170.728 kb on - strand, within AO353_00770 at 170.728 kb on - strand, within AO353_00770 at 170.769 kb on + strand, within AO353_00770 at 170.769 kb on + strand, within AO353_00770 at 170.769 kb on + strand, within AO353_00770 at 170.769 kb on + strand, within AO353_00770 at 170.769 kb on + strand, within AO353_00770 at 170.770 kb on - strand, within AO353_00770
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 167,337 + AO353_00755 0.85 -0.5 167,361 + AO353_00755 0.87 -0.7 167,362 - AO353_00755 0.87 -1.6 167,362 - AO353_00755 0.87 +0.9 167,371 + AO353_00755 0.87 -2.1 167,413 + +0.1 167,413 + -0.7 167,413 + +0.2 167,414 - -0.6 167,414 - +0.4 167,414 - -1.4 167,414 - -1.1 167,485 + +0.2 167,485 + -1.1 167,485 + +0.1 167,485 + +0.2 167,485 + -1.4 167,485 + +1.6 167,485 + -0.2 167,486 - -0.5 167,486 - +0.5 167,486 - +2.5 167,486 - -0.7 167,519 + +2.3 167,520 - -0.1 167,578 + -1.1 167,578 + -0.1 167,578 + -0.6 167,578 + -1.6 167,578 + -1.2 167,578 + +0.3 167,578 + +0.5 167,578 + +0.4 167,578 + -2.2 167,578 + -2.2 167,578 + +1.7 167,578 + +1.1 167,579 - +0.9 167,579 - +0.3 167,579 - -1.5 167,579 - +0.9 167,579 - -1.6 167,579 - +0.3 167,586 + -0.7 167,586 + -0.5 167,587 - -1.8 167,587 - +0.5 167,587 - -0.6 167,587 - +1.8 167,587 - +0.8 167,663 + +0.3 167,794 + AO353_00760 0.17 -1.6 167,794 + AO353_00760 0.17 +0.1 167,794 + AO353_00760 0.17 +1.5 167,794 + AO353_00760 0.17 -0.9 167,794 + AO353_00760 0.17 +0.2 167,795 - AO353_00760 0.18 +0.7 167,795 - AO353_00760 0.18 +0.7 167,892 - AO353_00760 0.46 -0.5 168,070 - +1.1 168,097 + +0.9 168,098 - +0.2 168,115 + -1.9 168,115 + -0.1 168,124 - -1.6 168,124 - +0.0 168,124 - -0.3 168,228 + -1.6 168,262 + +0.2 168,262 + -0.6 168,263 - +0.4 168,263 - +0.9 168,297 + -0.9 168,305 + +1.3 168,305 + -1.1 168,456 - +1.5 168,552 + AO353_00765 0.16 -0.3 168,552 + AO353_00765 0.16 +0.7 168,553 - AO353_00765 0.16 +1.4 168,553 - AO353_00765 0.16 +0.7 168,556 + AO353_00765 0.17 +0.9 168,557 - AO353_00765 0.17 -1.8 168,607 + AO353_00765 0.20 +1.5 168,607 + AO353_00765 0.20 +0.8 168,652 + AO353_00765 0.23 +1.6 168,652 + AO353_00765 0.23 +0.1 168,652 + AO353_00765 0.23 +1.5 168,811 - AO353_00765 0.34 +0.7 168,881 + AO353_00765 0.39 +1.6 168,882 - AO353_00765 0.39 +2.3 168,882 - AO353_00765 0.39 +1.3 168,882 - AO353_00765 0.39 +0.2 168,882 - AO353_00765 0.39 -0.1 168,936 + AO353_00765 0.43 +0.4 168,936 + AO353_00765 0.43 -1.7 168,997 + AO353_00765 0.47 +0.8 168,998 - AO353_00765 0.47 +3.2 168,998 - AO353_00765 0.47 +0.6 168,998 - AO353_00765 0.47 +1.4 169,078 + AO353_00765 0.52 +1.3 169,078 + AO353_00765 0.52 +1.8 169,078 + AO353_00765 0.52 +0.9 169,078 + AO353_00765 0.52 +2.0 169,078 + AO353_00765 0.52 -1.1 169,079 - AO353_00765 0.52 +2.2 169,079 - AO353_00765 0.52 +2.1 169,105 + AO353_00765 0.54 +0.7 169,105 + AO353_00765 0.54 +1.4 169,105 + AO353_00765 0.54 +1.0 169,105 + AO353_00765 0.54 +1.1 169,106 - AO353_00765 0.54 +1.1 169,106 - AO353_00765 0.54 +1.4 169,106 - AO353_00765 0.54 +2.3 169,106 - AO353_00765 0.54 +1.5 169,106 - AO353_00765 0.54 -0.9 169,199 + AO353_00765 0.61 +1.6 169,200 - AO353_00765 0.61 +0.7 169,255 + AO353_00765 0.64 +2.5 169,255 + AO353_00765 0.64 +0.8 169,255 + -0.7 169,255 + AO353_00765 0.64 +1.4 169,255 + AO353_00765 0.64 +0.8 169,255 + AO353_00765 0.64 +0.9 169,255 + AO353_00765 0.64 +0.2 169,255 + AO353_00765 0.64 +0.5 169,255 + AO353_00765 0.64 +2.4 169,256 - AO353_00765 0.65 -0.7 169,256 - AO353_00765 0.65 +1.8 169,256 - AO353_00765 0.65 +0.9 169,256 - AO353_00765 0.65 +0.7 169,260 + AO353_00765 0.65 +0.2 169,260 + AO353_00765 0.65 +0.5 169,261 - AO353_00765 0.65 +1.1 169,306 + AO353_00765 0.68 +1.7 169,307 - AO353_00765 0.68 +0.9 169,307 - AO353_00765 0.68 +2.4 169,352 + AO353_00765 0.71 +1.4 169,701 + +1.2 169,702 - +1.3 169,776 + +1.2 169,776 + -0.3 169,776 + +0.3 169,777 - -0.4 169,777 - -0.7 169,852 + -0.4 169,852 + +0.4 169,852 + +0.9 169,852 + -0.9 169,852 + -0.9 169,853 - -0.2 169,853 - +0.3 169,853 - +2.6 169,853 - -1.0 170,095 + -0.4 170,095 + +0.1 170,095 + -0.9 170,095 + -0.9 170,095 + +1.1 170,095 + -0.9 170,096 - +0.2 170,096 - -0.5 170,114 + -0.6 170,114 + +0.4 170,115 - -0.4 170,115 - -1.0 170,131 + -0.7 170,131 + +0.5 170,131 + -0.3 170,132 - -1.0 170,132 - +0.3 170,132 - +1.2 170,132 - -0.4 170,132 - +0.6 170,132 - -1.4 170,274 + AO353_00770 0.14 +1.1 170,274 + AO353_00770 0.14 +0.0 170,275 - AO353_00770 0.14 -0.6 170,275 - AO353_00770 0.14 +0.6 170,275 - AO353_00770 0.14 -0.5 170,382 + AO353_00770 0.18 -0.6 170,383 - AO353_00770 0.18 -1.1 170,464 + AO353_00770 0.22 +1.1 170,475 + AO353_00770 0.22 +1.6 170,475 + AO353_00770 0.22 -0.1 170,475 + AO353_00770 0.22 +1.3 170,475 + AO353_00770 0.22 -2.0 170,476 - AO353_00770 0.22 -0.3 170,659 + AO353_00770 0.30 +0.9 170,659 + AO353_00770 0.30 +2.1 170,660 - AO353_00770 0.30 -0.9 170,660 - AO353_00770 0.30 +0.3 170,681 + AO353_00770 0.31 +0.9 170,681 + AO353_00770 0.31 -1.9 170,701 - AO353_00770 0.32 +0.6 170,701 - AO353_00770 0.32 -0.3 170,701 - AO353_00770 0.32 +0.5 170,727 + AO353_00770 0.33 -0.3 170,727 + AO353_00770 0.33 +0.2 170,727 + AO353_00770 0.33 -0.9 170,727 + AO353_00770 0.33 +0.4 170,727 + AO353_00770 0.33 +0.3 170,727 + AO353_00770 0.33 +0.5 170,728 - AO353_00770 0.33 -0.3 170,728 - AO353_00770 0.33 +0.1 170,728 - AO353_00770 0.33 -1.1 170,728 - AO353_00770 0.33 +0.5 170,728 - AO353_00770 0.33 +0.2 170,728 - AO353_00770 0.33 -1.1 170,728 - AO353_00770 0.33 -1.1 170,728 - AO353_00770 0.33 -0.4 170,769 + AO353_00770 0.35 -0.5 170,769 + AO353_00770 0.35 -0.0 170,769 + AO353_00770 0.35 -0.4 170,769 + AO353_00770 0.35 +0.4 170,769 + AO353_00770 0.35 +0.5 170,770 - AO353_00770 0.35 -0.8
Or see this region's nucleotide sequence