Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003160

Experiment: D-Cellobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C)
3,571,846	-		ABIE53_003159	0.45	+0.2
3,571,846	-		ABIE53_003159	0.45	-0.6
3,571,846	-		ABIE53_003159	0.45	-2.4
3,571,846	-		ABIE53_003159	0.45	-1.3
3,571,846	-		ABIE53_003159	0.45	+0.3
3,571,846	-		ABIE53_003159	0.45	-2.3
3,571,975	-		ABIE53_003159	0.58	+0.5
3,571,975	-		ABIE53_003159	0.58	-1.5
3,571,975	-		ABIE53_003159	0.58	-1.6
3,571,975	-		ABIE53_003159	0.58	-0.5
3,571,975	-		ABIE53_003159	0.58	-2.2
3,571,975	-		ABIE53_003159	0.58	-2.4
3,571,975	-		ABIE53_003159	0.58	-1.3
3,571,975	-		ABIE53_003159	0.58	-0.1
3,571,975	-		ABIE53_003159	0.58	-3.1
3,571,975	-		ABIE53_003159	0.58	-1.3
3,571,975	-		ABIE53_003159	0.58	-1.6
3,571,975	-		ABIE53_003159	0.58	-1.5
3,571,975	-		ABIE53_003159	0.58	-2.6
3,571,975	-		ABIE53_003159	0.58	-1.5
3,571,975	-		ABIE53_003159	0.58	-1.5
3,572,071	-		ABIE53_003159	0.67	-3.4
3,572,071	-		ABIE53_003159	0.67	-0.1
3,572,071	-		ABIE53_003159	0.67	-3.0
3,572,393	-				-1.6
3,572,489	-				-1.1
3,572,489	-				+0.5
3,572,503	-				+1.1
3,572,503	-				+1.5
3,572,503	-				+0.8
3,572,503	-				+3.1
3,572,503	-				+0.2
3,572,503	-				-0.6
3,572,503	-				+0.5
3,572,503	-				-0.9
3,572,509	-				-0.5
3,572,509	-				+0.3
3,572,509	-				+0.9
3,572,509	-				-0.2
3,572,509	-				-0.7
3,572,509	-				-0.0
3,572,509	-				+0.0
3,572,509	-				+0.2
3,572,509	-				-0.6
3,572,509	-				+0.2
3,572,509	-				+0.5
3,572,509	-				+0.2
3,572,509	-				-1.2
3,572,509	-				+1.3
3,572,509	-				-1.1
3,572,509	-				-0.5
3,572,509	-				+0.5
3,572,509	-				+0.1
3,572,509	-				+0.5
3,572,509	-				-0.9
3,572,509	-				-0.7
3,572,509	-				-0.9
3,572,509	-				-1.3
3,572,509	-				+0.1
3,572,509	-				+0.2
3,572,509	-				-0.1
3,572,509	-				-0.3
3,572,531	-				-0.9
3,572,590	-				-0.6
3,572,590	-				-0.5
3,572,641	-				-0.8
3,572,696	+				+0.6
3,572,696	+				-0.1
3,572,696	+				-0.6
3,572,696	+				-0.2
3,572,697	-				-0.5
3,572,697	-				-1.3
3,572,697	-				-0.7
3,572,697	-				-0.3
3,572,697	-				-0.5
3,572,697	-				+1.2
3,572,697	-				-1.9
3,572,722	+				+1.0
3,572,722	+				-1.1
3,572,722	+				+0.5
3,572,722	+				-0.7
3,572,722	+				-0.8
3,572,723	-				-0.5
3,572,723	-				+0.3
3,572,723	-				-0.4
3,572,723	-				-0.6
3,572,723	-				-0.3
3,572,723	-				+0.5
3,572,723	-				-0.1
3,572,723	-				+1.5
3,572,723	-				-1.3
3,572,726	+				-0.7
3,572,726	+				-1.3
3,572,727	-				+0.6
3,572,727	-				-0.3
3,572,727	-				-0.5
3,572,727	-				-1.5
3,572,794	+		ABIE53_003160	0.12	-1.9
3,572,794	+		ABIE53_003160	0.12	-0.9
3,572,794	+		ABIE53_003160	0.12	-0.3
3,572,794	+		ABIE53_003160	0.12	-2.1
3,572,794	+		ABIE53_003160	0.12	-3.1
3,572,794	+		ABIE53_003160	0.12	-1.6
3,572,795	-		ABIE53_003160	0.12	+0.1
3,572,795	-		ABIE53_003160	0.12	-2.4
3,572,795	-		ABIE53_003160	0.12	-1.5
3,572,795	-		ABIE53_003160	0.12	-0.8
3,572,795	-		ABIE53_003160	0.12	-0.9
3,572,795	-		ABIE53_003160	0.12	-2.2
3,572,795	-		ABIE53_003160	0.12	-2.6
3,572,795	-		ABIE53_003160	0.12	-2.2
3,572,875	+		ABIE53_003160	0.26	-1.1
3,572,875	+		ABIE53_003160	0.26	-1.6
3,572,875	+		ABIE53_003160	0.26	-2.4
3,572,875	+		ABIE53_003160	0.26	-0.6
3,572,876	-		ABIE53_003160	0.26	-2.4
3,572,876	-		ABIE53_003160	0.26	-2.6
3,572,911	+		ABIE53_003160	0.32	-1.9
3,572,911	+		ABIE53_003160	0.32	-2.7
3,572,911	+		ABIE53_003160	0.32	-3.2
3,572,911	+		ABIE53_003160	0.32	-1.4
3,572,911	+		ABIE53_003160	0.32	-0.9
3,572,911	+		ABIE53_003160	0.32	-3.6
3,572,911	+		ABIE53_003160	0.32	-1.5
3,572,911	+		ABIE53_003160	0.32	-0.5
3,572,912	-		ABIE53_003160	0.32	-2.8
3,572,912	-		ABIE53_003160	0.32	-1.5
3,572,912	-		ABIE53_003160	0.32	-0.6
3,572,912	-		ABIE53_003160	0.32	-1.5
3,572,912	-		ABIE53_003160	0.32	-2.0
3,572,912	-		ABIE53_003160	0.32	+0.5
3,572,912	-		ABIE53_003160	0.32	-1.3
3,572,912	-		ABIE53_003160	0.32	-2.0
3,572,912	-		ABIE53_003160	0.32	-1.6
3,572,912	-		ABIE53_003160	0.32	-1.9
3,572,914	+		ABIE53_003160	0.32	-0.2
3,572,914	+		ABIE53_003160	0.32	-1.3
3,572,914	+		ABIE53_003160	0.32	-2.5
3,572,915	-		ABIE53_003160	0.32	-2.8
3,572,915	-		ABIE53_003160	0.32	-1.3
3,572,915	-		ABIE53_003160	0.32	+0.5
3,572,915	-		ABIE53_003160	0.32	-0.8
3,572,932	+		ABIE53_003160	0.35	-1.3
3,572,932	+		ABIE53_003160	0.35	-1.7
3,572,932	+		ABIE53_003160	0.35	-2.1
3,572,933	-		ABIE53_003160	0.35	-0.5
3,573,327	+				-2.2
3,573,327	+				-0.9
3,573,327	+				-1.2
3,573,327	+				-1.5
3,573,327	+				-0.1
3,573,328	-				+0.3
3,573,328	-				-0.0
3,573,328	-				-0.1
3,573,328	-				+0.4
3,573,328	-				+1.3
3,573,328	-				+0.4
3,573,334	+				-1.9
3,573,334	+				-1.5
3,573,335	-				+0.7
3,573,337	+				-1.1
3,573,337	+				-0.6
3,573,337	+				-1.4
3,573,338	-				-0.0
3,573,338	-				-1.0
3,573,345	-				+0.5
3,573,390	+				+0.3
3,573,390	+				-1.6
3,573,390	+				-1.8
3,573,390	+				-1.4
3,573,390	+				+0.2
3,573,390	+				-1.4
3,573,390	+				-1.6
3,573,390	+				-1.8
3,573,390	+				-0.6
3,573,390	+				-1.9
3,573,390	+				-0.5
3,573,390	+				-1.1
3,573,390	+				-2.0
3,573,390	+				+0.3
3,573,390	+				-2.5
3,573,390	+				-1.1
3,573,390	+				+0.4
3,573,391	-				-0.4
3,573,391	-				+0.9
3,573,391	-				-0.5
3,573,391	-				+0.1
3,573,391	-				-0.6
3,573,391	-				+0.2
3,573,391	-				+0.1
3,573,391	-				-0.7
3,573,391	-				-0.9
3,573,391	-				-0.4
3,573,391	-				-0.1
3,573,391	-				-0.3
3,573,391	-				+0.9
3,573,391	-				-0.1
3,573,391	-				-0.4
3,573,391	-				+0.4
3,573,391	-				-0.1
3,573,391	-				+0.3
3,573,391	-				+1.9
3,573,391	-				-0.6
3,573,391	-				+0.7
3,573,391	-				+0.9
3,573,391	-				-0.1
3,573,391	-				+0.5
3,573,391	-				+0.2
3,573,391	-				-1.0
3,573,392	+				-0.9
3,573,392	+				-2.9
3,573,392	+				-2.3
3,573,392	+				-0.6
3,573,392	+				-2.2
3,573,392	+				-1.1
3,573,392	+				-1.3
3,573,392	+				-0.8
3,573,392	+				-1.9
3,573,392	+				-0.6
3,573,392	+				+0.5
3,573,392	+				+0.5
3,573,392	+				+2.1
3,573,392	+				-0.7
3,573,392	+				-1.1
3,573,392	+				-1.1
3,573,392	+				-1.2
3,573,393	-				-0.5
3,573,393	-				+0.4
3,573,393	-				-0.1
3,573,393	-				-1.5
3,573,393	-				-0.3
3,573,393	-				+0.5
3,573,393	-				-0.8
3,573,393	-				-0.3
3,573,393	-				+0.4
3,573,393	-				-0.1
3,573,393	-				+0.4
3,573,393	-				-1.6
3,573,393	-				-0.7
3,573,393	-				+1.5
3,573,393	-				-0.1
3,573,393	-				-0.9
3,573,393	-				-0.2
3,573,393	-				-1.5
3,573,393	-				-0.2
3,573,393	-				-0.1
3,573,393	-				-1.0
3,573,393	-				-1.3
3,573,393	-				+0.2
3,573,393	-				-0.2
3,573,393	-				-0.6
3,573,393	-				-0.1
3,573,393	-				+0.2
3,573,393	-				-0.6
3,573,393	-				-0.9
3,573,393	-				+0.3
3,573,393	-				-1.0
3,573,393	-				-0.9
3,573,492	-				-0.5
3,573,492	-				+0.1