Strain Fitness in Pantoea sp. MT58 around IAI47_18615

Experiment: Nickel (II) chloride 40 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 40 uM, aerobic
3,968,241	+		IAI47_18610	0.66	-0.5
3,968,241	+		IAI47_18610	0.66	+0.2
3,968,242	-		IAI47_18610	0.66	-0.6
3,968,242	-		IAI47_18610	0.66	-0.4
3,968,320	+		IAI47_18610	0.68	-1.7
3,968,320	+		IAI47_18610	0.68	+0.2
3,968,320	+		IAI47_18610	0.68	+0.0
3,968,320	+		IAI47_18610	0.68	-0.9
3,968,321	-		IAI47_18610	0.68	-0.7
3,968,321	-		IAI47_18610	0.68	+0.1
3,968,321	-		IAI47_18610	0.68	+0.4
3,968,321	-		IAI47_18610	0.68	-0.6
3,968,321	-		IAI47_18610	0.68	+0.0
3,968,321	-		IAI47_18610	0.68	-0.2
3,968,321	-		IAI47_18610	0.68	-0.7
3,968,377	+		IAI47_18610	0.70	-0.7
3,968,378	-		IAI47_18610	0.70	+0.3
3,968,401	+		IAI47_18610	0.71	-0.2
3,968,402	-		IAI47_18610	0.71	+1.0
3,968,420	+		IAI47_18610	0.72	+0.2
3,968,420	+		IAI47_18610	0.72	-0.6
3,968,420	+		IAI47_18610	0.72	-1.3
3,968,420	+		IAI47_18610	0.72	-0.9
3,968,421	-		IAI47_18610	0.72	-0.7
3,968,421	-		IAI47_18610	0.72	-0.5
3,968,440	+		IAI47_18610	0.72	+0.9
3,968,440	+		IAI47_18610	0.72	+1.1
3,968,440	+		IAI47_18610	0.72	-2.7
3,968,440	+		IAI47_18610	0.72	-2.6
3,968,440	+		IAI47_18610	0.72	-0.6
3,968,440	+		IAI47_18610	0.72	-0.3
3,968,441	-		IAI47_18610	0.72	-0.4
3,968,441	-		IAI47_18610	0.72	-0.0
3,968,509	+		IAI47_18610	0.75	-1.4
3,968,559	+		IAI47_18610	0.77	-0.9
3,968,734	+		IAI47_18610	0.83	+0.1
3,968,734	+		IAI47_18610	0.83	+0.1
3,968,734	+		IAI47_18610	0.83	-0.0
3,968,734	+		IAI47_18610	0.83	-0.1
3,968,734	+		IAI47_18610	0.83	-0.3
3,968,734	+		IAI47_18610	0.83	+0.0
3,968,735	-		IAI47_18610	0.83	-1.0
3,968,735	-		IAI47_18610	0.83	-2.2
3,968,736	-		IAI47_18610	0.83	-1.3
3,968,751	+		IAI47_18610	0.83	-2.2
3,968,751	+		IAI47_18610	0.83	-0.6
3,968,751	+		IAI47_18610	0.83	-0.4
3,968,751	+		IAI47_18610	0.83	-0.2
3,968,751	+		IAI47_18610	0.83	+0.2
3,968,751	+		IAI47_18610	0.83	+0.4
3,968,751	+		IAI47_18610	0.83	-0.8
3,968,751	+		IAI47_18610	0.83	+0.0
3,968,751	+		IAI47_18610	0.83	-0.0
3,968,751	+		IAI47_18610	0.83	-0.8
3,968,751	+		IAI47_18610	0.83	-0.2
3,968,751	+		IAI47_18610	0.83	-1.2
3,968,751	+		IAI47_18610	0.83	-3.0
3,968,752	-		IAI47_18610	0.83	-0.5
3,968,752	-		IAI47_18610	0.83	-1.4
3,968,752	-		IAI47_18610	0.83	-0.7
3,968,752	-		IAI47_18610	0.83	+0.1
3,968,752	-		IAI47_18610	0.83	-2.7
3,968,752	-		IAI47_18610	0.83	-2.3
3,968,752	-		IAI47_18610	0.83	+0.3
3,968,752	-		IAI47_18610	0.83	-0.9
3,968,752	-		IAI47_18610	0.83	+0.5
3,968,752	-		IAI47_18610	0.83	-2.0
3,968,926	+		IAI47_18610	0.89	-0.1
3,968,926	+		IAI47_18610	0.89	-0.6
3,968,926	+		IAI47_18610	0.89	-1.4
3,968,927	-		IAI47_18610	0.89	-0.9
3,968,927	-		IAI47_18610	0.89	-0.8
3,968,927	-		IAI47_18610	0.89	-0.1
3,968,927	-		IAI47_18610	0.89	-0.2
3,968,927	-		IAI47_18610	0.89	-0.8
3,968,929	+		IAI47_18610	0.89	-1.5
3,968,929	+		IAI47_18610	0.89	+0.0
3,968,929	+		IAI47_18610	0.89	-2.6
3,968,929	+		IAI47_18610	0.89	+1.6
3,968,930	-		IAI47_18610	0.89	+0.5
3,968,930	-		IAI47_18610	0.89	-0.9
3,968,930	-		IAI47_18610	0.89	-0.5
3,968,930	-		IAI47_18610	0.89	+0.3
3,968,930	-		IAI47_18610	0.89	-0.3
3,969,001	+				-0.5
3,969,001	+				+0.4
3,969,002	-				-0.8
3,969,002	-				-0.3
3,969,088	+				-1.1
3,969,088	+				-0.7
3,969,088	+				-0.6
3,969,089	-				+0.5
3,969,089	-				+0.1
3,969,089	-				+0.4
3,969,106	-				-1.1
3,969,106	-				-1.2
3,969,148	+				+0.5
3,969,149	-				+0.2
3,969,191	+				-0.0
3,969,207	-				-0.1
3,969,288	+				-0.4
3,969,288	+				+0.8
3,969,289	-				-0.2
3,969,294	+				-1.2
3,969,294	+				-1.1
3,969,294	+				-0.7
3,969,295	-				-2.1
3,969,295	-				-0.2
3,969,295	-				+0.9
3,969,334	+				+0.2
3,969,334	+				-1.8
3,969,334	+				-1.3
3,969,335	-				-0.4
3,969,335	-				-1.6
3,969,381	+				-0.5
3,969,381	+				-0.7
3,969,381	+				-0.5
3,969,382	-				-0.1
3,969,382	-				+0.1
3,969,382	-				-0.2
3,969,382	-				-1.5
3,969,382	-				-0.8
3,969,382	-				-0.4
3,969,382	-				+0.1
3,969,383	+				+0.2
3,969,383	+				+0.2
3,969,383	+				-1.2
3,969,383	+				-0.2
3,969,384	-				-0.4
3,969,384	-				-3.0
3,969,384	-				+0.5
3,969,418	+				-0.7
3,969,502	-		IAI47_18615	0.12	-0.1
3,969,650	+		IAI47_18615	0.20	-0.1
3,969,657	+		IAI47_18615	0.20	-1.3
3,969,657	+		IAI47_18615	0.20	-0.9
3,969,658	-		IAI47_18615	0.20	+0.4
3,969,658	-		IAI47_18615	0.20	-0.2
3,969,658	-		IAI47_18615	0.20	-0.8
3,969,679	+		IAI47_18615	0.21	-0.7
3,969,679	+		IAI47_18615	0.21	-0.5
3,969,679	+		IAI47_18615	0.21	+0.3
3,969,679	+		IAI47_18615	0.21	-0.6
3,969,680	-		IAI47_18615	0.21	-0.2
3,969,680	-		IAI47_18615	0.21	+0.1
3,969,680	-		IAI47_18615	0.21	+0.6
3,969,680	-		IAI47_18615	0.21	-0.5
3,969,693	+		IAI47_18615	0.22	-0.1
3,969,693	+		IAI47_18615	0.22	+0.1
3,969,694	-		IAI47_18615	0.22	-0.6
3,969,694	-		IAI47_18615	0.22	-0.3
3,969,785	+		IAI47_18615	0.26	+0.5
3,969,785	+		IAI47_18615	0.26	-1.3
3,969,785	+		IAI47_18615	0.26	-0.2
3,969,785	+		IAI47_18615	0.26	-0.5
3,969,785	+		IAI47_18615	0.26	+0.1
3,969,785	+		IAI47_18615	0.26	-0.2
3,969,785	+		IAI47_18615	0.26	-0.2
3,969,785	+		IAI47_18615	0.26	-0.9
3,969,786	-		IAI47_18615	0.26	-1.5
3,969,786	-		IAI47_18615	0.26	+0.2
3,969,786	-		IAI47_18615	0.26	-0.6
3,969,786	-		IAI47_18615	0.26	-0.4
3,969,786	-		IAI47_18615	0.26	-1.4
3,969,786	-		IAI47_18615	0.26	-0.7
3,969,786	-		IAI47_18615	0.26	+1.1
3,969,786	-		IAI47_18615	0.26	-1.9
3,969,803	+		IAI47_18615	0.27	-0.5
3,969,803	+		IAI47_18615	0.27	-2.5
3,969,803	+		IAI47_18615	0.27	+0.1
3,969,803	+		IAI47_18615	0.27	+0.0
3,969,804	-		IAI47_18615	0.27	-0.0
3,969,804	-		IAI47_18615	0.27	-0.2
3,969,804	-		IAI47_18615	0.27	-0.8
3,969,804	-		IAI47_18615	0.27	+0.8
3,969,826	+		IAI47_18615	0.28	-0.8
3,969,826	+		IAI47_18615	0.28	+0.5
3,969,826	+		IAI47_18615	0.28	-0.5
3,969,826	+		IAI47_18615	0.28	-1.0
3,969,827	-		IAI47_18615	0.28	-0.7
3,969,827	-		IAI47_18615	0.28	+0.1
3,969,827	-		IAI47_18615	0.28	+0.0
3,969,936	+		IAI47_18615	0.33	+0.8
3,970,010	+		IAI47_18615	0.37	-0.2
3,970,011	-		IAI47_18615	0.37	+0.1
3,970,011	-		IAI47_18615	0.37	-0.2
3,970,011	-		IAI47_18615	0.37	-0.4
3,970,031	+		IAI47_18615	0.38	+0.2
3,970,059	+		IAI47_18615	0.39	-0.9
3,970,059	+		IAI47_18615	0.39	-0.6
3,970,060	-		IAI47_18615	0.39	+0.0
3,970,060	-		IAI47_18615	0.39	+0.6
3,970,060	-		IAI47_18615	0.39	+0.8
3,970,064	+		IAI47_18615	0.39	-0.3
3,970,064	+		IAI47_18615	0.39	-1.2
3,970,064	+		IAI47_18615	0.39	+0.4
3,970,064	+		IAI47_18615	0.39	+0.1
3,970,064	+		IAI47_18615	0.39	-1.0
3,970,065	-		IAI47_18615	0.39	-0.9
3,970,065	-		IAI47_18615	0.39	+0.1
3,970,094	+		IAI47_18615	0.41	-0.5
3,970,094	+		IAI47_18615	0.41	+0.1
3,970,094	+		IAI47_18615	0.41	+0.3
3,970,125	+		IAI47_18615	0.42	-0.3
3,970,125	+		IAI47_18615	0.42	+1.2
3,970,125	+		IAI47_18615	0.42	-0.7
3,970,125	+		IAI47_18615	0.42	-0.4
3,970,125	+		IAI47_18615	0.42	-0.2
3,970,125	+		IAI47_18615	0.42	-0.5
3,970,126	-		IAI47_18615	0.42	+0.1
3,970,126	-		IAI47_18615	0.42	-0.5
3,970,126	-		IAI47_18615	0.42	+0.1
3,970,126	-		IAI47_18615	0.42	-0.6
3,970,128	+		IAI47_18615	0.42	-1.1
3,970,129	-		IAI47_18615	0.42	+0.1
3,970,129	-		IAI47_18615	0.42	-0.2
3,970,129	-		IAI47_18615	0.42	-0.4
3,970,129	-		IAI47_18615	0.42	+0.3
3,970,129	-		IAI47_18615	0.42	-0.8
3,970,129	-		IAI47_18615	0.42	-0.4
3,970,137	+		IAI47_18615	0.43	-0.5
3,970,148	+		IAI47_18615	0.43	+0.4
3,970,148	+		IAI47_18615	0.43	-1.7
3,970,149	-		IAI47_18615	0.43	-0.4
3,970,212	+		IAI47_18615	0.46	+1.0
3,970,212	+		IAI47_18615	0.46	+1.5
3,970,212	+		IAI47_18615	0.46	-0.0
3,970,213	-		IAI47_18615	0.46	-1.0
3,970,213	-		IAI47_18615	0.46	+0.2
3,970,213	-		IAI47_18615	0.46	-1.3
3,970,213	-		IAI47_18615	0.46	-0.3
3,970,213	-		IAI47_18615	0.46	-1.0
3,970,213	-		IAI47_18615	0.46	-0.7
3,970,217	+		IAI47_18615	0.46	+1.6
3,970,217	+		IAI47_18615	0.46	-0.8
3,970,218	-		IAI47_18615	0.46	-0.8
3,970,218	-		IAI47_18615	0.46	-0.3
3,970,317	+		IAI47_18615	0.51	+0.7
3,970,317	+		IAI47_18615	0.51	+0.6
3,970,317	+		IAI47_18615	0.51	-2.4
3,970,318	-		IAI47_18615	0.51	+0.1
3,970,411	-		IAI47_18615	0.56	-0.0
3,970,411	-		IAI47_18615	0.56	-0.3
3,970,522	-		IAI47_18615	0.61	+0.5
3,970,541	+		IAI47_18615	0.62	-0.9
3,970,542	-		IAI47_18615	0.62	-1.2
3,970,542	-		IAI47_18615	0.62	-0.0
3,970,542	-		IAI47_18615	0.62	+0.1
3,970,542	-		IAI47_18615	0.62	-0.8
3,970,542	-		IAI47_18615	0.62	+0.9
3,970,587	+		IAI47_18615	0.64	-1.9
3,970,588	-		IAI47_18615	0.64	-0.7
3,970,610	+		IAI47_18615	0.65	-0.4
3,970,610	+		IAI47_18615	0.65	+0.2
3,970,611	-		IAI47_18615	0.65	-1.0
3,970,611	-		IAI47_18615	0.65	+0.7
3,970,611	-		IAI47_18615	0.65	+0.8
3,970,616	+		IAI47_18615	0.65	-0.9
3,970,616	+		IAI47_18615	0.65	-0.2
3,970,616	+		IAI47_18615	0.65	-0.3
3,970,616	+		IAI47_18615	0.65	+1.2
3,970,616	+		IAI47_18615	0.65	+0.8
3,970,616	+		IAI47_18615	0.65	-1.2
3,970,616	+		IAI47_18615	0.65	-1.2
3,970,616	+		IAI47_18615	0.65	+0.3
3,970,616	+		IAI47_18615	0.65	-0.3
3,970,617	-		IAI47_18615	0.65	-1.2
3,970,617	-		IAI47_18615	0.65	-0.5
3,970,617	-		IAI47_18615	0.65	-1.3
3,970,687	-		IAI47_18615	0.69	-0.8
3,970,687	-		IAI47_18615	0.69	-0.2
3,970,687	-		IAI47_18615	0.69	-0.9
3,970,770	+		IAI47_18615	0.73	-0.7
3,970,770	+		IAI47_18615	0.73	-0.7
3,970,770	+		IAI47_18615	0.73	-1.4
3,970,771	-		IAI47_18615	0.73	-0.6
3,970,771	-		IAI47_18615	0.73	+0.6
3,970,771	-		IAI47_18615	0.73	-0.2
3,970,771	-		IAI47_18615	0.73	+0.7
3,970,799	+		IAI47_18615	0.74	-0.2
3,970,799	+		IAI47_18615	0.74	-1.5
3,970,799	+		IAI47_18615	0.74	+0.1
3,970,799	+		IAI47_18615	0.74	-0.7
3,970,799	+		IAI47_18615	0.74	-0.1
3,970,799	+		IAI47_18615	0.74	-0.4
3,970,800	-		IAI47_18615	0.74	-0.2
3,970,800	-		IAI47_18615	0.74	-0.1
3,970,800	-		IAI47_18615	0.74	-1.0
3,970,800	-		IAI47_18615	0.74	-0.0
3,970,800	-		IAI47_18615	0.74	-1.5
3,970,800	-		IAI47_18615	0.74	+0.8
3,970,800	-		IAI47_18615	0.74	+0.5
3,970,800	-		IAI47_18615	0.74	+0.5
3,970,800	-		IAI47_18615	0.74	-0.0
3,970,800	-		IAI47_18615	0.74	+0.9
3,970,800	-		IAI47_18615	0.74	-0.7
3,970,800	-		IAI47_18615	0.74	-0.4
3,970,800	-		IAI47_18615	0.74	-1.2
3,970,800	-		IAI47_18615	0.74	-0.7
3,970,800	-		IAI47_18615	0.74	-0.4
3,970,805	-		IAI47_18615	0.74	-0.3
3,970,845	+		IAI47_18615	0.76	-1.2
3,970,845	+		IAI47_18615	0.76	-0.6
3,970,846	-		IAI47_18615	0.76	-0.1
3,970,846	-		IAI47_18615	0.76	-0.6
3,970,863	-		IAI47_18615	0.77	-0.9
3,970,869	+		IAI47_18615	0.77	-0.4
3,970,869	+		IAI47_18615	0.77	-1.2
3,970,870	-		IAI47_18615	0.77	+0.2
3,970,893	+		IAI47_18615	0.78	-1.0
3,970,894	-		IAI47_18615	0.78	+0.6
3,970,894	-		IAI47_18615	0.78	-1.1
3,970,894	-		IAI47_18615	0.78	-0.5
3,970,909	+		IAI47_18615	0.79	-2.5
3,970,909	+		IAI47_18615	0.79	-0.6
3,970,909	+		IAI47_18615	0.79	-1.1
3,970,910	-		IAI47_18615	0.79	+2.1
3,970,910	-		IAI47_18615	0.79	-1.4
3,970,910	-		IAI47_18615	0.79	-0.1
3,970,941	+		IAI47_18615	0.81	-0.0
3,970,942	-		IAI47_18615	0.81	-1.0
3,970,943	+		IAI47_18615	0.81	+0.8
3,970,943	+		IAI47_18615	0.81	-1.0
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