Strain Fitness in Pantoea sp. MT58 around IAI47_17960

Experiment: Nickel (II) chloride 40 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 40 uM, aerobic
3,812,082	+		IAI47_17955	0.26	-1.7
3,812,092	+		IAI47_17955	0.27	-0.8
3,812,127	+		IAI47_17955	0.31	-0.5
3,812,128	-		IAI47_17955	0.31	+0.3
3,812,257	-		IAI47_17955	0.45	+0.1
3,812,283	+		IAI47_17955	0.48	+0.4
3,812,283	+		IAI47_17955	0.48	-0.2
3,812,283	+		IAI47_17955	0.48	-0.6
3,812,284	-		IAI47_17955	0.48	+0.0
3,812,284	-		IAI47_17955	0.48	-0.4
3,812,284	-		IAI47_17955	0.48	-1.1
3,812,284	-		IAI47_17955	0.48	-0.8
3,812,284	-		IAI47_17955	0.48	+1.1
3,812,295	+		IAI47_17955	0.49	+0.7
3,812,295	+		IAI47_17955	0.49	-0.0
3,812,323	-		IAI47_17955	0.52	+0.1
3,812,330	+		IAI47_17955	0.53	-0.1
3,812,341	+		IAI47_17955	0.54	+0.4
3,812,424	-		IAI47_17955	0.63	-0.4
3,812,424	-		IAI47_17955	0.63	-0.1
3,812,424	-		IAI47_17955	0.63	-0.3
3,812,499	+		IAI47_17955	0.71	+0.9
3,812,499	+		IAI47_17955	0.71	-0.5
3,812,499	+		IAI47_17955	0.71	+1.4
3,812,499	+		IAI47_17955	0.71	+1.5
3,812,546	+		IAI47_17955	0.77	-0.3
3,812,546	+		IAI47_17955	0.77	+0.6
3,812,546	+		IAI47_17955	0.77	-0.2
3,812,547	-		IAI47_17955	0.77	-0.1
3,812,547	-		IAI47_17955	0.77	+1.3
3,812,547	-		IAI47_17955	0.77	+0.5
3,812,547	-		IAI47_17955	0.77	+1.2
3,812,547	-		IAI47_17955	0.77	+0.1
3,812,569	+		IAI47_17955	0.79	-1.2
3,812,570	-		IAI47_17955	0.79	-0.6
3,812,610	+		IAI47_17955	0.84	-1.2
3,812,610	+		IAI47_17955	0.84	+0.3
3,812,637	+		IAI47_17955	0.86	-0.9
3,812,637	+		IAI47_17955	0.86	+0.2
3,812,637	+		IAI47_17955	0.86	+1.0
3,812,637	+		IAI47_17955	0.86	+1.3
3,812,638	-		IAI47_17955	0.87	+0.6
3,812,638	-		IAI47_17955	0.87	-0.9
3,812,654	+		IAI47_17955	0.88	+0.7
3,812,654	+		IAI47_17955	0.88	-0.4
3,812,654	+		IAI47_17955	0.88	+0.6
3,812,654	+		IAI47_17955	0.88	-0.7
3,812,654	+		IAI47_17955	0.88	-1.0
3,812,654	+		IAI47_17955	0.88	+0.0
3,812,654	+		IAI47_17955	0.88	-0.3
3,812,654	+		IAI47_17955	0.88	+2.2
3,812,654	+		IAI47_17955	0.88	+0.7
3,812,654	+		IAI47_17955	0.88	+0.1
3,812,654	+		IAI47_17955	0.88	-0.5
3,812,655	-		IAI47_17955	0.88	+0.1
3,812,655	-		IAI47_17955	0.88	+0.8
3,812,655	-		IAI47_17955	0.88	+0.5
3,812,655	-		IAI47_17955	0.88	+1.2
3,812,655	-		IAI47_17955	0.88	-0.1
3,812,655	-		IAI47_17955	0.88	+0.2
3,812,685	+				-0.5
3,812,686	-				+0.8
3,812,686	-				-0.9
3,812,696	+				+0.2
3,812,696	+				-0.6
3,812,696	+				-1.1
3,812,697	-				+0.5
3,812,697	-				-0.2
3,812,697	-				+0.2
3,812,697	-				+0.5
3,812,697	-				+0.2
3,812,697	-				-0.1
3,812,697	-				+1.0
3,812,697	-				+0.6
3,812,697	-				-2.2
3,812,697	-				+0.1
3,812,699	+				+0.3
3,812,699	+				+2.5
3,812,699	+				-2.2
3,812,699	+				+0.2
3,812,699	+				-0.6
3,812,700	-				+0.5
3,812,700	-				+0.3
3,812,746	+				+1.0
3,812,746	+				+0.2
3,812,760	+				-0.6
3,812,774	+				+0.3
3,812,774	+				+1.9
3,812,774	+				+1.1
3,812,775	-				-0.3
3,812,776	+				+2.5
3,812,776	+				-0.5
3,812,776	+				+0.0
3,812,777	-				-1.1
3,812,777	-				-0.9
3,812,777	-				+2.2
3,812,777	-				-0.4
3,812,777	-				+1.3
3,812,777	-				+0.2
3,812,777	-				+1.0
3,812,777	-				+0.1
3,812,777	-				-0.8
3,812,785	+				-0.8
3,812,786	-				-1.3
3,812,786	-				-0.9
3,812,792	+				+0.5
3,812,792	+				-0.9
3,812,792	+				-1.4
3,812,793	-				+0.3
3,812,854	+				+0.1
3,812,855	-				-0.8
3,812,855	-				-0.4
3,812,855	-				-0.8
3,812,855	-				-1.5
3,812,865	+				+0.3
3,812,866	-				-0.0
3,812,875	+				-1.2
3,812,934	-				-0.5
3,812,946	-				-0.9
3,812,963	-				-1.0
3,812,963	-				+0.9
3,812,963	-				-0.4
3,813,010	+				+0.4
3,813,023	-				+0.7
3,813,048	-				-0.6
3,813,051	+				-0.3
3,813,051	+				-0.4
3,813,051	+				+1.4
3,813,051	+				-0.9
3,813,051	+				+1.0
3,813,051	+				+0.2
3,813,051	+				-1.0
3,813,052	-				+0.5
3,813,052	-				-1.9
3,813,052	-				+1.6
3,813,052	-				+0.9
3,813,052	-				-0.6
3,813,052	-				+0.1
3,813,052	-				+0.9
3,813,052	-				+0.6
3,813,097	+				+0.3
3,813,097	+				-0.1
3,813,098	-				-0.1
3,813,098	-				+0.3
3,813,098	-				-0.3
3,813,098	-				+0.6
3,813,112	+				-0.3
3,813,113	-				-1.1
3,813,144	+				+0.1
3,813,144	+				-0.4
3,813,145	-				+0.3
3,813,145	-				+0.9
3,813,145	-				+0.1
3,813,410	+		IAI47_17960	0.29	-1.0
3,813,410	+		IAI47_17960	0.29	-1.1
3,813,410	+		IAI47_17960	0.29	-0.0
3,813,410	+		IAI47_17960	0.29	+0.8
3,813,410	+		IAI47_17960	0.29	+0.3
3,813,410	+		IAI47_17960	0.29	-1.1
3,813,410	+		IAI47_17960	0.29	-0.7
3,813,410	+		IAI47_17960	0.29	+0.9
3,813,410	+		IAI47_17960	0.29	+0.5
3,813,410	+		IAI47_17960	0.29	-0.7
3,813,410	+		IAI47_17960	0.29	-0.1
3,813,411	-		IAI47_17960	0.29	+0.1
3,813,411	-		IAI47_17960	0.29	+1.0
3,813,411	-		IAI47_17960	0.29	-1.0
3,813,411	-		IAI47_17960	0.29	+0.2
3,813,411	-		IAI47_17960	0.29	-0.8
3,813,422	+		IAI47_17960	0.30	+1.2
3,813,422	+		IAI47_17960	0.30	+0.1
3,813,422	+		IAI47_17960	0.30	+1.3
3,813,422	+		IAI47_17960	0.30	+0.4
3,813,422	+		IAI47_17960	0.30	+0.1
3,813,423	-		IAI47_17960	0.30	+1.1
3,813,423	-		IAI47_17960	0.30	-2.0
3,813,423	-		IAI47_17960	0.30	+0.9
3,813,423	-		IAI47_17960	0.30	-0.6
3,813,423	-		IAI47_17960	0.30	-0.8
3,813,423	-		IAI47_17960	0.30	+0.7
3,813,423	-		IAI47_17960	0.30	+1.0
3,813,428	+		IAI47_17960	0.30	-0.7
3,813,428	+		IAI47_17960	0.30	+0.8
3,813,428	+		IAI47_17960	0.30	+1.7
3,813,429	-		IAI47_17960	0.30	+0.8
3,813,429	-		IAI47_17960	0.30	-0.7
3,813,438	+		IAI47_17960	0.31	-1.6
3,813,438	+		IAI47_17960	0.31	-1.3
3,813,558	-		IAI47_17960	0.40	+1.2
3,813,691	+		IAI47_17960	0.50	-0.2
3,813,691	+		IAI47_17960	0.50	-0.5
3,813,692	-		IAI47_17960	0.50	-1.4
3,813,692	-		IAI47_17960	0.50	-1.3
3,813,692	-		IAI47_17960	0.50	-0.8
3,813,692	-		IAI47_17960	0.50	+0.1
3,813,692	-		IAI47_17960	0.50	+1.0
3,813,716	+		IAI47_17960	0.51	+0.1
3,813,716	+		IAI47_17960	0.51	-1.1
3,813,716	+		IAI47_17960	0.51	-0.1
3,813,717	-		IAI47_17960	0.51	+0.6
3,813,717	-		IAI47_17960	0.51	+0.4
3,813,763	+		IAI47_17960	0.55	+0.9
3,813,763	+		IAI47_17960	0.55	-2.5
3,813,763	+		IAI47_17960	0.55	+0.4
3,813,763	+		IAI47_17960	0.55	-0.1
3,813,764	-		IAI47_17960	0.55	+0.3
3,813,764	-		IAI47_17960	0.55	-0.1
3,813,764	-		IAI47_17960	0.55	-0.1
3,813,764	-		IAI47_17960	0.55	+0.9
3,813,783	+		IAI47_17960	0.56	-0.6
3,813,783	+		IAI47_17960	0.56	+1.6
3,813,784	-		IAI47_17960	0.56	-0.2
3,813,830	+		IAI47_17960	0.60	+0.8
3,813,831	-		IAI47_17960	0.60	+0.1
3,813,831	-		IAI47_17960	0.60	+0.6
3,813,861	+		IAI47_17960	0.62	+0.3
3,813,861	+		IAI47_17960	0.62	-0.9
3,813,862	-		IAI47_17960	0.62	+0.5
3,813,903	+		IAI47_17960	0.65	+0.0
3,813,942	-		IAI47_17960	0.68	+0.7
3,814,049	+		IAI47_17960	0.76	+0.9
3,814,088	+		IAI47_17960	0.79	+0.5
3,814,089	-		IAI47_17960	0.79	-0.1
3,814,156	+		IAI47_17960	0.84	-1.9
3,814,156	+		IAI47_17960	0.84	-0.4
3,814,157	-		IAI47_17960	0.84	+0.7
3,814,172	+		IAI47_17960	0.85	-0.4
3,814,238	+				+0.9
3,814,239	-				+0.8
3,814,239	-				+0.5
3,814,239	-				+1.2
3,814,274	+				-0.5
3,814,274	+				+0.8
3,814,275	-				-0.8
3,814,329	+				+0.5
3,814,356	+				-0.3
3,814,356	+				+0.4
3,814,375	+				-2.1
3,814,375	+				+0.4
3,814,375	+				+0.5
3,814,375	+				+0.0
3,814,375	+				+0.1
3,814,376	-				+0.1
3,814,376	-				-0.8
3,814,376	-				+0.1
3,814,376	-				-0.5
3,814,376	-				+0.0
3,814,376	-				-0.3
3,814,376	-				+0.3
3,814,376	-				-0.1
3,814,376	-				+0.1
3,814,376	-				-0.4
3,814,376	-				+0.2
3,814,376	-				+0.4
3,814,393	+				+0.3
3,814,393	+				-0.3
3,814,393	+				-0.6
3,814,394	-				+1.9
3,814,394	-				+1.3
3,814,394	-				+0.2
3,814,479	+				+0.4
3,814,480	-				-1.2
3,814,480	-				+0.4
3,814,480	-				+0.9
3,814,615	+				+0.3
3,814,615	+				-1.4
3,814,615	+				-0.1
3,814,616	-				-0.8
3,814,616	-				-0.1
3,814,616	-				-0.6
3,814,616	-				+0.1
3,814,616	-				+1.0
3,814,616	-				-1.4
3,814,616	-				+0.6
3,814,651	+				-0.8
3,814,651	+				-1.6
3,814,651	+				-0.2
3,814,651	+				-1.9
3,814,651	+				-1.3
3,814,651	+				-0.5
3,814,652	-				-0.9
3,814,652	-				-0.6
3,814,652	-				-1.8
3,814,652	-				+0.1
3,814,652	-				-0.9
3,814,652	-				+0.2
3,814,696	+				-0.9
3,814,696	+				-0.4
3,814,696	+				-0.7
3,814,696	+				+0.3
3,814,704	+				-0.2
3,814,704	+				-0.7
3,814,704	+				-0.0
3,814,710	+				+1.5
3,814,711	-				-1.1
3,814,711	-				+1.3
3,814,774	-				-0.2
3,814,792	+				-0.2
3,814,792	+				-0.5
3,814,792	+				+0.9
3,814,793	-				-0.7
3,814,793	-				-0.6
3,814,793	-				+0.3
3,814,793	-				-0.7
3,814,793	-				+0.2
3,814,801	+				-0.0
3,814,801	+				-0.1
3,814,802	-				+0.8
3,814,833	-				-0.1
3,814,834	-				-0.3
3,814,926	+				+0.9
3,814,986	-				-0.4
3,814,986	-				-1.2
3,815,000	-				-1.9
3,815,000	-				+0.1
3,815,000	-				-0.0
3,815,000	-				-0.3
3,815,010	+				+1.0
3,815,011	-				-0.8
3,815,049	+				+0.9
3,815,049	+				-0.5
3,815,049	+				+0.8
3,815,049	+				+0.4
3,815,049	+				-0.7
3,815,049	+				-1.4
3,815,049	+				-0.3
3,815,050	-				-1.9
3,815,050	-				-1.7
3,815,050	-				+0.1
3,815,050	-				-1.0
3,815,052	+				+0.4
3,815,053	-				+1.0
3,815,053	-				-1.3
3,815,079	+				-0.5
3,815,146	+				-1.8
3,815,313	+		IAI47_17965	0.15	-2.3
3,815,313	+		IAI47_17965	0.15	-2.1
3,815,313	+		IAI47_17965	0.15	-3.6
3,815,313	+		IAI47_17965	0.15	-2.2
3,815,314	-		IAI47_17965	0.15	-1.1
3,815,314	-		IAI47_17965	0.15	-3.0
3,815,314	-		IAI47_17965	0.15	-1.3
3,815,314	-		IAI47_17965	0.15	-2.3
3,815,314	-		IAI47_17965	0.15	-1.2
3,815,314	-		IAI47_17965	0.15	-1.9
3,815,314	-		IAI47_17965	0.15	-3.8