Strain Fitness in Pantoea sp. MT58 around IAI47_05265

Experiment: Nickel (II) chloride 40 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 40 uM, aerobic
1,111,725	-		IAI47_05255	0.76	-0.5
1,111,730	+		IAI47_05255	0.77	+0.9
1,111,730	+		IAI47_05255	0.77	-0.5
1,111,730	+		IAI47_05255	0.77	+0.4
1,111,731	-		IAI47_05255	0.77	-0.0
1,111,731	-		IAI47_05255	0.77	+0.4
1,111,797	+				-0.6
1,111,798	-				+0.7
1,111,812	+				+0.4
1,111,813	-				-0.3
1,111,813	-				+0.5
1,111,813	-				-1.0
1,111,855	+				-0.3
1,111,871	-				-0.1
1,111,873	+				+0.5
1,111,873	+				+0.8
1,111,873	+				+0.5
1,111,873	+				-1.3
1,111,873	+				+0.1
1,111,873	+				+0.2
1,111,873	+				+0.4
1,111,873	+				+0.7
1,111,874	-				+0.4
1,111,874	-				-0.8
1,111,874	-				+0.5
1,111,874	-				+0.3
1,111,908	+				+0.3
1,111,908	+				+0.8
1,111,909	-				+0.5
1,111,933	+				+0.2
1,111,934	-				-0.2
1,111,934	-				-0.7
1,111,934	-				-0.4
1,111,934	-				+0.6
1,111,934	-				-1.3
1,111,934	-				+0.7
1,111,955	+				+1.3
1,111,955	+				+0.7
1,111,955	+				+0.4
1,111,956	-				-0.3
1,111,956	-				+0.2
1,111,956	-				+0.0
1,111,956	-				+0.0
1,111,968	+				+0.3
1,111,968	+				+0.3
1,111,968	+				+1.7
1,111,969	-				+0.0
1,111,969	-				+0.8
1,111,969	-				-0.8
1,111,969	-				-2.0
1,111,969	-				+0.3
1,111,980	-				-0.1
1,111,993	+				+0.5
1,112,041	+				+0.1
1,112,041	+				+0.0
1,112,041	+				+0.9
1,112,041	+				+0.3
1,112,041	+				+0.8
1,112,042	-				-0.1
1,112,042	-				-0.1
1,112,049	+				+0.8
1,112,049	+				+0.6
1,112,050	-				+0.2
1,112,050	-				-0.3
1,112,050	-				+0.9
1,112,085	-		IAI47_05260	0.13	+1.4
1,112,087	+		IAI47_05260	0.14	+0.8
1,112,087	+		IAI47_05260	0.14	-0.2
1,112,088	-		IAI47_05260	0.14	+0.2
1,112,088	-		IAI47_05260	0.14	+0.7
1,112,088	-		IAI47_05260	0.14	+0.0
1,112,088	-		IAI47_05260	0.14	+0.8
1,112,088	-		IAI47_05260	0.14	-1.1
1,112,147	+		IAI47_05260	0.22	+0.8
1,112,148	-		IAI47_05260	0.22	-1.3
1,112,149	+		IAI47_05260	0.23	+1.0
1,112,149	+		IAI47_05260	0.23	-0.2
1,112,149	+		IAI47_05260	0.23	-0.4
1,112,149	+		IAI47_05260	0.23	-1.9
1,112,149	+		IAI47_05260	0.23	-1.3
1,112,149	+		IAI47_05260	0.23	+0.2
1,112,149	+		IAI47_05260	0.23	+0.5
1,112,149	+		IAI47_05260	0.23	-0.1
1,112,149	+		IAI47_05260	0.23	-0.5
1,112,149	+		IAI47_05260	0.23	+0.2
1,112,149	+		IAI47_05260	0.23	-1.0
1,112,149	+		IAI47_05260	0.23	+0.9
1,112,150	-		IAI47_05260	0.23	+1.5
1,112,150	-		IAI47_05260	0.23	-0.6
1,112,150	-		IAI47_05260	0.23	-0.2
1,112,150	-		IAI47_05260	0.23	-0.2
1,112,150	-		IAI47_05260	0.23	-0.1
1,112,150	-		IAI47_05260	0.23	-0.5
1,112,150	-		IAI47_05260	0.23	-1.7
1,112,150	-		IAI47_05260	0.23	-0.9
1,112,222	+		IAI47_05260	0.33	-0.5
1,112,223	-		IAI47_05260	0.33	+1.1
1,112,223	-		IAI47_05260	0.33	+0.4
1,112,223	-		IAI47_05260	0.33	+1.0
1,112,228	+		IAI47_05260	0.34	-0.6
1,112,228	+		IAI47_05260	0.34	+0.4
1,112,229	-		IAI47_05260	0.34	-0.2
1,112,229	-		IAI47_05260	0.34	+0.5
1,112,229	-		IAI47_05260	0.34	-0.8
1,112,229	-		IAI47_05260	0.34	-0.1
1,112,229	-		IAI47_05260	0.34	+0.3
1,112,249	+		IAI47_05260	0.37	-0.1
1,112,249	+		IAI47_05260	0.37	+0.7
1,112,249	+		IAI47_05260	0.37	+1.4
1,112,250	-		IAI47_05260	0.37	+0.4
1,112,250	-		IAI47_05260	0.37	+0.8
1,112,250	-		IAI47_05260	0.37	-0.4
1,112,250	-		IAI47_05260	0.37	+0.3
1,112,252	+		IAI47_05260	0.37	-0.3
1,112,252	+		IAI47_05260	0.37	-0.1
1,112,252	+		IAI47_05260	0.37	+0.6
1,112,252	+		IAI47_05260	0.37	-0.6
1,112,252	+		IAI47_05260	0.37	+1.3
1,112,253	-		IAI47_05260	0.38	-0.2
1,112,253	-		IAI47_05260	0.38	-1.1
1,112,253	-		IAI47_05260	0.38	-0.1
1,112,253	-		IAI47_05260	0.38	+0.6
1,112,253	-		IAI47_05260	0.38	-1.3
1,112,420	+		IAI47_05260	0.61	-0.8
1,112,420	+		IAI47_05260	0.61	-0.7
1,112,420	+		IAI47_05260	0.61	+1.0
1,112,420	+		IAI47_05260	0.61	+0.6
1,112,421	-		IAI47_05260	0.62	-0.1
1,112,421	-		IAI47_05260	0.62	-0.5
1,112,421	-		IAI47_05260	0.62	-0.1
1,112,421	-		IAI47_05260	0.62	+1.4
1,112,421	-		IAI47_05260	0.62	+0.4
1,112,424	-		IAI47_05260	0.62	+1.5
1,112,424	-		IAI47_05260	0.62	-0.0
1,112,424	-		IAI47_05260	0.62	+0.9
1,112,424	-		IAI47_05260	0.62	+0.7
1,112,424	-		IAI47_05260	0.62	+1.7
1,112,459	+		IAI47_05260	0.67	+0.2
1,112,459	+		IAI47_05260	0.67	-2.2
1,112,459	+		IAI47_05260	0.67	+0.2
1,112,460	-		IAI47_05260	0.67	+0.8
1,112,468	+		IAI47_05260	0.68	-1.2
1,112,468	+		IAI47_05260	0.68	+0.3
1,112,468	+		IAI47_05260	0.68	+0.7
1,112,468	+		IAI47_05260	0.68	-1.6
1,112,469	-		IAI47_05260	0.69	-1.4
1,112,469	-		IAI47_05260	0.69	+0.1
1,112,471	+		IAI47_05260	0.69	+1.0
1,112,471	+		IAI47_05260	0.69	+0.5
1,112,471	+		IAI47_05260	0.69	-0.6
1,112,471	+		IAI47_05260	0.69	+0.7
1,112,471	+		IAI47_05260	0.69	+0.1
1,112,472	-		IAI47_05260	0.69	+0.3
1,112,472	-		IAI47_05260	0.69	+0.8
1,112,472	-		IAI47_05260	0.69	+0.1
1,112,472	-		IAI47_05260	0.69	-0.9
1,112,498	+		IAI47_05260	0.73	+1.2
1,112,598	-		IAI47_05260	0.87	-0.0
1,112,600	+		IAI47_05260	0.87	+0.7
1,112,600	+		IAI47_05260	0.87	+0.5
1,112,600	+		IAI47_05260	0.87	+0.2
1,112,601	-		IAI47_05260	0.88	+0.7
1,112,601	-		IAI47_05260	0.88	-0.2
1,112,606	+		IAI47_05260	0.88	-0.3
1,112,606	+		IAI47_05260	0.88	+0.4
1,112,606	+		IAI47_05260	0.88	-0.6
1,112,607	-		IAI47_05260	0.88	+0.0
1,112,611	+		IAI47_05260	0.89	-0.7
1,112,611	+		IAI47_05260	0.89	-2.4
1,112,612	-		IAI47_05260	0.89	+0.4
1,112,612	-		IAI47_05260	0.89	-2.3
1,112,612	-		IAI47_05260	0.89	-0.5
1,112,617	+		IAI47_05260	0.90	-1.0
1,112,617	+		IAI47_05260	0.90	+0.6
1,112,675	+				-0.2
1,112,675	+				+0.7
1,112,682	+				+0.6
1,113,593	+				-0.1
1,113,598	+				+0.5
1,113,599	-				+1.2
1,113,617	-				-0.3
1,113,617	-				+0.1
1,113,624	-				+1.0
1,113,639	-				+0.2
1,113,660	+				+0.4
1,113,661	-				+0.1
1,113,700	+				+0.8
1,113,702	+				-0.8
1,113,702	+				-0.2
1,113,702	+				+0.2
1,113,703	-				+1.1
1,113,703	-				+0.7
1,113,703	-				-2.3
1,113,703	-				+0.9
1,113,703	-				-0.2
1,113,703	-				+0.3
1,113,703	-				-1.7
1,113,731	-		IAI47_05270	0.12	-1.5
1,113,749	+		IAI47_05270	0.13	+0.0
1,113,749	+		IAI47_05270	0.13	+0.1
1,113,788	+		IAI47_05270	0.17	+0.4
1,113,802	+		IAI47_05270	0.19	-0.2
1,113,802	+		IAI47_05270	0.19	+0.7
1,113,802	+		IAI47_05270	0.19	+0.1
1,113,802	+		IAI47_05270	0.19	+0.8
1,113,802	+		IAI47_05270	0.19	-0.7
1,113,803	-		IAI47_05270	0.19	+1.7
1,113,803	-		IAI47_05270	0.19	+0.0
1,113,803	-		IAI47_05270	0.19	-1.3
1,113,803	-		IAI47_05270	0.19	-0.4
1,113,810	-		IAI47_05270	0.19	-0.0
1,113,936	+		IAI47_05270	0.32	-1.2
1,113,936	+		IAI47_05270	0.32	-0.4
1,113,936	+		IAI47_05270	0.32	-0.9
1,113,936	+		IAI47_05270	0.32	+0.2
1,113,936	+		IAI47_05270	0.32	+1.3
1,113,937	-		IAI47_05270	0.32	+0.1
1,113,937	-		IAI47_05270	0.32	+1.0
1,113,937	-		IAI47_05270	0.32	+0.7
1,113,939	+		IAI47_05270	0.32	-0.6
1,114,008	+		IAI47_05270	0.39	+0.6
1,114,008	+		IAI47_05270	0.39	-1.0
1,114,009	-		IAI47_05270	0.39	+0.1
1,114,075	+		IAI47_05270	0.45	+0.4
1,114,075	+		IAI47_05270	0.45	+0.8
1,114,075	+		IAI47_05270	0.45	-0.0
1,114,114	+		IAI47_05270	0.49	+0.6
1,114,114	+		IAI47_05270	0.49	-0.6
1,114,115	-		IAI47_05270	0.49	-0.0
1,114,133	+		IAI47_05270	0.51	-0.2
1,114,133	+		IAI47_05270	0.51	-0.4
1,114,133	+		IAI47_05270	0.51	-0.9
1,114,133	+		IAI47_05270	0.51	-0.1
1,114,133	+		IAI47_05270	0.51	+0.4
1,114,134	-		IAI47_05270	0.51	-0.1
1,114,134	-		IAI47_05270	0.51	+0.9
1,114,161	+		IAI47_05270	0.53	+0.6
1,114,162	+		IAI47_05270	0.53	-1.0
1,114,162	-		IAI47_05270	0.53	+0.1
1,114,170	+		IAI47_05270	0.54	-1.9
1,114,170	+		IAI47_05270	0.54	+0.7
1,114,170	+		IAI47_05270	0.54	-0.1
1,114,195	+		IAI47_05270	0.57	+0.1
1,114,196	-		IAI47_05270	0.57	+0.1
1,114,196	-		IAI47_05270	0.57	+0.4
1,114,196	-		IAI47_05270	0.57	+1.4
1,114,196	-		IAI47_05270	0.57	-1.0
1,114,287	+		IAI47_05270	0.66	+0.3
1,114,287	+		IAI47_05270	0.66	+1.0
1,114,287	+		IAI47_05270	0.66	+0.5
1,114,287	+		IAI47_05270	0.66	+1.6
1,114,287	+		IAI47_05270	0.66	-0.1
1,114,288	-		IAI47_05270	0.66	-0.5
1,114,348	+		IAI47_05270	0.72	+0.3
1,114,348	+		IAI47_05270	0.72	-0.3
1,114,348	+		IAI47_05270	0.72	-1.0
1,114,348	+		IAI47_05270	0.72	+0.4
1,114,349	-		IAI47_05270	0.72	+0.4
1,114,349	-		IAI47_05270	0.72	+0.3
1,114,349	-		IAI47_05270	0.72	+0.0
1,114,349	-		IAI47_05270	0.72	-0.3
1,114,349	-		IAI47_05270	0.72	+0.1
1,114,349	-		IAI47_05270	0.72	+0.4
1,114,350	+		IAI47_05270	0.72	-0.3
1,114,350	+		IAI47_05270	0.72	-0.8
1,114,350	+		IAI47_05270	0.72	+0.1
1,114,350	+		IAI47_05270	0.72	-0.5
1,114,350	+		IAI47_05270	0.72	+0.1
1,114,350	+		IAI47_05270	0.72	-1.1
1,114,350	+		IAI47_05270	0.72	+0.5
1,114,350	+		IAI47_05270	0.72	+0.0
1,114,350	+		IAI47_05270	0.72	+0.2
1,114,350	+		IAI47_05270	0.72	-1.1
1,114,350	+		IAI47_05270	0.72	+0.3
1,114,350	+		IAI47_05270	0.72	-1.5
1,114,350	+		IAI47_05270	0.72	+0.7
1,114,350	+		IAI47_05270	0.72	-0.3
1,114,350	+		IAI47_05270	0.72	-0.2
1,114,351	-		IAI47_05270	0.72	+0.5
1,114,351	-		IAI47_05270	0.72	-0.3
1,114,351	-		IAI47_05270	0.72	-1.9
1,114,351	-		IAI47_05270	0.72	+1.6
1,114,351	-		IAI47_05270	0.72	+0.4
1,114,351	-		IAI47_05270	0.72	+0.3
1,114,351	-		IAI47_05270	0.72	+1.8
1,114,351	-		IAI47_05270	0.72	+0.0
1,114,351	-		IAI47_05270	0.72	-0.3
1,114,428	+		IAI47_05270	0.79	+0.4
1,114,444	+		IAI47_05270	0.81	-2.4
1,114,444	+		IAI47_05270	0.81	-0.1
1,114,444	+		IAI47_05270	0.81	-0.2
1,114,445	-		IAI47_05270	0.81	+0.2
1,114,445	-		IAI47_05270	0.81	-0.0
1,114,445	-		IAI47_05270	0.81	+0.4
1,114,499	+		IAI47_05270	0.86	+0.4
1,114,499	+		IAI47_05270	0.86	+1.1
1,114,500	-		IAI47_05270	0.86	-2.2
1,114,500	-		IAI47_05270	0.86	-0.8
1,114,513	+		IAI47_05270	0.88	+0.4
1,114,513	+		IAI47_05270	0.88	+0.2
1,114,513	+		IAI47_05270	0.88	-0.4
1,114,513	+		IAI47_05270	0.88	+2.3