Strain Fitness in Pantoea sp. MT58 around IAI47_04925

Experiment: Nickel (II) chloride 40 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 40 uM, aerobic
1,029,179	+		IAI47_04915	0.33	-0.1
1,029,205	+		IAI47_04915	0.37	-0.8
1,029,205	+		IAI47_04915	0.37	-0.2
1,029,206	-		IAI47_04915	0.37	+0.6
1,029,206	-		IAI47_04915	0.37	-0.2
1,029,206	-		IAI47_04915	0.37	-1.3
1,029,357	+		IAI47_04915	0.61	+0.0
1,029,357	+		IAI47_04915	0.61	+0.9
1,029,357	+		IAI47_04915	0.61	-0.9
1,029,357	+		IAI47_04915	0.61	+0.2
1,029,357	+		IAI47_04915	0.61	-1.2
1,029,358	-		IAI47_04915	0.61	-0.3
1,029,358	-		IAI47_04915	0.61	+1.2
1,029,358	-		IAI47_04915	0.61	-0.3
1,029,360	+		IAI47_04915	0.62	-0.1
1,029,360	+		IAI47_04915	0.62	+0.9
1,029,361	-		IAI47_04915	0.62	-0.9
1,029,361	-		IAI47_04915	0.62	+0.1
1,029,361	-		IAI47_04915	0.62	+0.7
1,029,361	-		IAI47_04915	0.62	-1.5
1,029,488	+		IAI47_04915	0.82	+0.6
1,029,504	+		IAI47_04915	0.84	-0.7
1,029,504	+		IAI47_04915	0.84	+0.3
1,029,505	-		IAI47_04915	0.84	-0.4
1,029,513	+		IAI47_04915	0.85	+1.1
1,029,612	-				+1.1
1,029,631	+				+0.3
1,029,632	-				+0.3
1,029,632	-				+0.2
1,029,632	-				+0.2
1,029,632	-				+1.1
1,029,632	-				-0.2
1,029,633	+				+1.0
1,029,633	+				-0.8
1,029,633	+				+0.3
1,030,159	-				-0.3
1,030,159	-				+1.5
1,030,159	-				-0.8
1,030,159	-				+0.4
1,030,159	-				+1.5
1,030,257	+				+0.8
1,030,258	-				-0.8
1,030,258	-				+1.8
1,030,271	+				+0.0
1,030,271	+				+0.9
1,030,271	+				+0.1
1,030,272	-				-0.8
1,030,272	-				-1.3
1,030,272	-				+1.1
1,030,272	-				+2.0
1,030,278	+				-0.1
1,030,279	-				+0.2
1,030,299	+				+0.7
1,030,299	+				-0.3
1,030,299	+				+0.5
1,030,299	+				-0.7
1,030,299	+				-0.1
1,030,299	+				+1.9
1,030,299	+				-0.8
1,030,299	+				+0.9
1,030,299	+				-0.2
1,030,300	-				-0.5
1,030,300	-				+0.4
1,030,300	-				-0.5
1,030,300	-				+0.6
1,030,300	-				+1.7
1,030,303	+		IAI47_04925	0.10	+0.7
1,030,303	+		IAI47_04925	0.10	-1.9
1,030,303	+		IAI47_04925	0.10	-2.9
1,030,303	+		IAI47_04925	0.10	+0.6
1,030,303	+		IAI47_04925	0.10	-0.3
1,030,303	+		IAI47_04925	0.10	+0.7
1,030,304	-		IAI47_04925	0.10	-0.2
1,030,304	-		IAI47_04925	0.10	-0.8
1,030,305	+		IAI47_04925	0.10	-0.2
1,030,305	+		IAI47_04925	0.10	-0.8
1,030,305	+		IAI47_04925	0.10	+0.8
1,030,305	+		IAI47_04925	0.10	+1.8
1,030,305	+		IAI47_04925	0.10	+1.8
1,030,305	+		IAI47_04925	0.10	-0.0
1,030,306	-		IAI47_04925	0.10	-0.1
1,030,306	-		IAI47_04925	0.10	+0.9
1,030,306	-		IAI47_04925	0.10	+2.0
1,030,306	-		IAI47_04925	0.10	+0.3
1,030,306	-		IAI47_04925	0.10	+0.5
1,030,306	-		IAI47_04925	0.10	+0.1
1,030,306	-		IAI47_04925	0.10	+0.4
1,030,306	-		IAI47_04925	0.10	-0.7
1,030,306	-		IAI47_04925	0.10	+0.5
1,030,306	-		IAI47_04925	0.10	+2.0
1,030,306	-		IAI47_04925	0.10	+0.3
1,030,326	+		IAI47_04925	0.12	-1.7
1,030,327	-		IAI47_04925	0.12	-1.0
1,030,327	-		IAI47_04925	0.12	-0.4
1,030,327	-		IAI47_04925	0.12	+0.0
1,030,332	+		IAI47_04925	0.12	+0.8
1,030,332	+		IAI47_04925	0.12	+0.2
1,030,332	+		IAI47_04925	0.12	-1.1
1,030,332	+		IAI47_04925	0.12	+0.4
1,030,332	+		IAI47_04925	0.12	-0.2
1,030,332	+		IAI47_04925	0.12	+1.4
1,030,332	+		IAI47_04925	0.12	+1.3
1,030,332	+		IAI47_04925	0.12	-0.2
1,030,333	-		IAI47_04925	0.12	+1.0
1,030,333	-		IAI47_04925	0.12	+0.8
1,030,333	-		IAI47_04925	0.12	+0.7
1,030,333	-		IAI47_04925	0.12	+0.4
1,030,333	-		IAI47_04925	0.12	+0.1
1,030,333	-		IAI47_04925	0.12	-1.9
1,030,333	-		IAI47_04925	0.12	+0.3
1,030,333	-		IAI47_04925	0.12	-0.2
1,030,333	-		IAI47_04925	0.12	+0.4
1,030,347	+		IAI47_04925	0.13	-0.7
1,030,347	+		IAI47_04925	0.13	-0.1
1,030,348	-		IAI47_04925	0.13	+1.1
1,030,348	-		IAI47_04925	0.13	-0.5
1,030,348	-		IAI47_04925	0.13	+0.5
1,030,348	-		IAI47_04925	0.13	+0.5
1,030,350	+		IAI47_04925	0.13	+0.7
1,030,351	-		IAI47_04925	0.13	-0.4
1,030,351	-		IAI47_04925	0.13	-0.8
1,030,351	-		IAI47_04925	0.13	+1.2
1,030,385	+		IAI47_04925	0.16	-0.0
1,030,385	+		IAI47_04925	0.16	+0.7
1,030,385	+		IAI47_04925	0.16	+0.2
1,030,385	+		IAI47_04925	0.16	+2.0
1,030,386	-		IAI47_04925	0.16	+0.2
1,030,386	-		IAI47_04925	0.16	-0.4
1,030,386	-		IAI47_04925	0.16	-0.0
1,030,386	-		IAI47_04925	0.16	-1.9
1,030,447	+		IAI47_04925	0.20	-0.6
1,030,447	+		IAI47_04925	0.20	-0.5
1,030,448	-		IAI47_04925	0.20	+2.0
1,030,448	-		IAI47_04925	0.20	-1.3
1,030,448	-		IAI47_04925	0.20	+0.9
1,030,448	-		IAI47_04925	0.20	-0.2
1,030,448	-		IAI47_04925	0.20	-0.8
1,030,448	-		IAI47_04925	0.20	-0.6
1,030,448	-		IAI47_04925	0.20	-0.7
1,030,456	-		IAI47_04925	0.21	-0.1
1,030,467	+		IAI47_04925	0.21	+0.5
1,030,467	+		IAI47_04925	0.21	-0.3
1,030,467	+		IAI47_04925	0.21	+0.3
1,030,467	+		IAI47_04925	0.21	+0.1
1,030,467	+		IAI47_04925	0.21	-1.1
1,030,467	+		IAI47_04925	0.21	+0.4
1,030,468	-		IAI47_04925	0.21	-0.3
1,030,468	-		IAI47_04925	0.21	+0.2
1,030,468	-		IAI47_04925	0.21	+0.1
1,030,468	-		IAI47_04925	0.21	-1.2
1,030,468	-		IAI47_04925	0.21	+0.0
1,030,489	+		IAI47_04925	0.23	+0.5
1,030,489	+		IAI47_04925	0.23	+0.3
1,030,489	+		IAI47_04925	0.23	+0.5
1,030,489	+		IAI47_04925	0.23	+0.2
1,030,489	+		IAI47_04925	0.23	-0.7
1,030,489	+		IAI47_04925	0.23	-1.2
1,030,489	+		IAI47_04925	0.23	+0.6
1,030,489	+		IAI47_04925	0.23	-0.3
1,030,490	-		IAI47_04925	0.23	-1.1
1,030,490	-		IAI47_04925	0.23	-0.6
1,030,490	-		IAI47_04925	0.23	+0.5
1,030,490	-		IAI47_04925	0.23	-0.5
1,030,531	+		IAI47_04925	0.26	-1.5
1,030,532	-		IAI47_04925	0.26	+1.3
1,030,532	-		IAI47_04925	0.26	-1.5
1,030,532	-		IAI47_04925	0.26	+0.6
1,030,532	-		IAI47_04925	0.26	-0.1
1,030,532	-		IAI47_04925	0.26	+0.5
1,030,532	-		IAI47_04925	0.26	-2.3
1,030,543	-		IAI47_04925	0.26	-0.6
1,030,579	+		IAI47_04925	0.29	+0.8
1,030,612	+		IAI47_04925	0.31	-0.3
1,030,612	+		IAI47_04925	0.31	+0.1
1,030,638	-		IAI47_04925	0.33	+0.7
1,030,683	+		IAI47_04925	0.36	+1.0
1,030,683	+		IAI47_04925	0.36	+1.2
1,030,684	-		IAI47_04925	0.36	+1.5
1,030,684	-		IAI47_04925	0.36	-1.5
1,030,725	+		IAI47_04925	0.39	+0.7
1,030,725	+		IAI47_04925	0.39	-0.9
1,030,725	+		IAI47_04925	0.39	+1.3
1,030,726	-		IAI47_04925	0.39	+0.6
1,030,759	+		IAI47_04925	0.41	+0.8
1,030,759	+		IAI47_04925	0.41	+0.2
1,030,759	+		IAI47_04925	0.41	+1.1
1,030,759	+		IAI47_04925	0.41	+0.9
1,030,760	-		IAI47_04925	0.41	+0.9
1,030,760	-		IAI47_04925	0.41	+0.6
1,030,760	-		IAI47_04925	0.41	+0.5
1,030,760	-		IAI47_04925	0.41	+0.1
1,030,797	+		IAI47_04925	0.44	+0.4
1,030,797	+		IAI47_04925	0.44	+0.6
1,030,797	+		IAI47_04925	0.44	+0.2
1,030,798	-		IAI47_04925	0.44	-0.3
1,030,798	-		IAI47_04925	0.44	+0.0
1,030,824	+		IAI47_04925	0.46	+0.3
1,030,825	-		IAI47_04925	0.46	+0.3
1,030,870	+		IAI47_04925	0.49	-0.7
1,030,923	+		IAI47_04925	0.53	+0.5
1,030,923	+		IAI47_04925	0.53	+1.3
1,030,923	+		IAI47_04925	0.53	-0.4
1,030,924	-		IAI47_04925	0.53	-1.1
1,030,924	-		IAI47_04925	0.53	+0.6
1,030,924	-		IAI47_04925	0.53	-0.5
1,030,924	-		IAI47_04925	0.53	-0.2
1,030,924	-		IAI47_04925	0.53	+0.4
1,030,978	-		IAI47_04925	0.56	-0.1
1,031,023	-		IAI47_04925	0.59	-0.4
1,031,043	-		IAI47_04925	0.61	+1.2
1,031,062	+		IAI47_04925	0.62	+0.6
1,031,110	+		IAI47_04925	0.65	+3.0
1,031,110	+		IAI47_04925	0.65	+0.0
1,031,110	+		IAI47_04925	0.65	+1.6
1,031,137	+		IAI47_04925	0.67	-1.1
1,031,139	+		IAI47_04925	0.67	+1.1
1,031,139	+		IAI47_04925	0.67	-0.5
1,031,139	+		IAI47_04925	0.67	-0.4
1,031,140	-		IAI47_04925	0.67	+1.0
1,031,174	+		IAI47_04925	0.70	-0.5
1,031,174	+		IAI47_04925	0.70	+0.7
1,031,175	-		IAI47_04925	0.70	-0.1
1,031,175	-		IAI47_04925	0.70	+0.4
1,031,175	-		IAI47_04925	0.70	+0.3
1,031,204	-		IAI47_04925	0.72	+1.3
1,031,215	-		IAI47_04925	0.73	+0.7
1,031,238	+		IAI47_04925	0.74	-0.3
1,031,238	+		IAI47_04925	0.74	+0.4
1,031,238	+		IAI47_04925	0.74	+1.3
1,031,238	+		IAI47_04925	0.74	-0.0
1,031,238	+		IAI47_04925	0.74	-1.3
1,031,238	+		IAI47_04925	0.74	+0.3
1,031,238	+		IAI47_04925	0.74	-1.0
1,031,238	+		IAI47_04925	0.74	-1.0
1,031,238	+		IAI47_04925	0.74	+0.7
1,031,238	+		IAI47_04925	0.74	+1.4
1,031,238	+		IAI47_04925	0.74	-0.1
1,031,239	-		IAI47_04925	0.74	-1.4
1,031,239	-		IAI47_04925	0.74	+1.8
1,031,239	-		IAI47_04925	0.74	+0.4
1,031,239	-		IAI47_04925	0.74	-0.6
1,031,239	-		IAI47_04925	0.74	-0.7
1,031,239	-		IAI47_04925	0.74	+0.0
1,031,239	-		IAI47_04925	0.74	+0.0
1,031,239	-		IAI47_04925	0.74	+1.1
1,031,239	-		IAI47_04925	0.74	+0.0
1,031,239	-		IAI47_04925	0.74	+1.5
1,031,239	-		IAI47_04925	0.74	+3.2
1,031,239	-		IAI47_04925	0.74	-0.1
1,031,241	+		IAI47_04925	0.74	+0.8
1,031,241	+		IAI47_04925	0.74	-0.4
1,031,242	-		IAI47_04925	0.74	+0.7
1,031,242	-		IAI47_04925	0.74	+0.4
1,031,242	-		IAI47_04925	0.74	+1.0
1,031,282	-		IAI47_04925	0.77	-1.5
1,031,282	-		IAI47_04925	0.77	+0.7
1,031,282	-		IAI47_04925	0.77	+0.4
1,031,283	+		IAI47_04925	0.77	+0.0
1,031,283	+		IAI47_04925	0.77	-1.3
1,031,283	+		IAI47_04925	0.77	+0.8
1,031,284	-		IAI47_04925	0.77	+0.9
1,031,284	-		IAI47_04925	0.77	+0.8
1,031,284	-		IAI47_04925	0.77	+1.5
1,031,284	-		IAI47_04925	0.77	+1.8
1,031,350	+		IAI47_04925	0.82	+0.0
1,031,350	+		IAI47_04925	0.82	-0.6
1,031,368	+		IAI47_04925	0.83	+0.0
1,031,368	+		IAI47_04925	0.83	+0.3
1,031,368	+		IAI47_04925	0.83	+0.1
1,031,368	+		IAI47_04925	0.83	+1.0
1,031,369	-		IAI47_04925	0.83	-0.0
1,031,412	+		IAI47_04925	0.86	+0.3
1,031,412	+		IAI47_04925	0.86	-1.3
1,031,412	+		IAI47_04925	0.86	+1.3
1,031,412	+		IAI47_04925	0.86	+1.5
1,031,412	+		IAI47_04925	0.86	+1.7
1,031,412	+		IAI47_04925	0.86	+0.2
1,031,413	-		IAI47_04925	0.86	-1.4
1,031,413	-		IAI47_04925	0.86	+1.0
1,031,413	-		IAI47_04925	0.86	+0.3
1,031,430	-		IAI47_04925	0.87	+0.6
1,031,437	+		IAI47_04925	0.88	+0.8
1,031,437	+		IAI47_04925	0.88	-0.2
1,031,445	+		IAI47_04925	0.88	+0.6
1,031,445	+		IAI47_04925	0.88	+0.2
1,031,445	+		IAI47_04925	0.88	-0.5
1,031,445	+		IAI47_04925	0.88	+0.6
1,031,445	+		IAI47_04925	0.88	-1.5
1,031,445	+		IAI47_04925	0.88	-0.3
1,031,446	-		IAI47_04925	0.88	+0.5
1,031,446	-		IAI47_04925	0.88	+0.8
1,031,446	-		IAI47_04925	0.88	+0.7
1,031,446	-		IAI47_04925	0.88	+0.2
1,031,446	-		IAI47_04925	0.88	+0.2
1,031,449	-		IAI47_04925	0.89	+1.3
1,031,449	-		IAI47_04925	0.89	+0.2
1,031,497	+				-1.2
1,031,497	+				+0.5
1,031,529	+				-0.4
1,031,530	-				-0.5
1,031,549	+				+0.4
1,031,620	+				-0.7
1,031,620	+				+0.6
1,031,661	+				-0.6
1,031,661	+				+1.5
1,031,661	+				+0.2
1,031,661	+				-0.6
1,031,661	+				+0.4
1,031,662	-				+0.0
1,031,662	-				+0.3
1,031,662	-				-1.7
1,031,665	+				+0.5
1,031,666	-				+0.1
1,031,666	-				-0.0
1,031,728	+				-2.2
1,031,728	+				+0.1
1,031,728	+				+0.2
1,031,730	+				-1.1
1,031,731	-				+0.1
1,031,812	+				+0.5
1,031,812	+				+0.8
1,031,812	+				-0.2
1,031,812	+				+0.8
1,031,812	+				+0.5
1,031,812	+				-0.1
1,031,812	+				+0.8
1,031,812	+				+0.3
1,031,812	+				-0.5
1,031,812	+				-0.4
1,031,812	+				-0.0
1,031,813	-				-0.3
1,031,813	-				-3.1
1,031,813	-				-2.2
1,031,813	-				-1.0
1,031,813	-				-0.6
1,031,813	-				-0.3
1,031,813	-				-0.9
1,031,814	+				-0.8
1,031,814	+				+0.1
1,031,814	+				-0.7
1,031,815	-				-1.9
1,031,815	-				-1.4
1,031,815	-				-1.5
1,031,817	+				-1.6
1,031,817	+				-0.6
1,031,817	+				-0.3
1,031,818	-				-2.6
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1,031,877	-				-1.5
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1,031,877	-				-6.0
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1,032,497	-		IAI47_04930	0.16	-4.5
1,032,497	-		IAI47_04930	0.16	-2.2
1,032,497	-		IAI47_04930	0.16	-0.7
1,032,497	-		IAI47_04930	0.16	-4.0
1,032,497	-		IAI47_04930	0.16	-3.7
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1,032,498	+		IAI47_04930	0.16	-3.5
1,032,498	+		IAI47_04930	0.16	-2.9
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1,032,498	+		IAI47_04930	0.16	-3.0
1,032,498	+		IAI47_04930	0.16	-4.0
1,032,498	+		IAI47_04930	0.16	-2.7
1,032,499	-		IAI47_04930	0.16	-2.9
1,032,499	-		IAI47_04930	0.16	-3.1
1,032,499	-		IAI47_04930	0.16	-1.9
1,032,499	-		IAI47_04930	0.16	-3.0
1,032,499	-		IAI47_04930	0.16	-2.2
1,032,499	-		IAI47_04930	0.16	-3.0
1,032,558	+		IAI47_04930	0.17	-0.4
1,032,591	+		IAI47_04930	0.18	-3.4
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1,032,592	-		IAI47_04930	0.18	-2.7
1,032,606	+		IAI47_04930	0.19	-2.0
1,032,606	+		IAI47_04930	0.19	-1.7
1,032,606	+		IAI47_04930	0.19	-2.6