Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS25185

Experiment: R2A with Polymyxin B sulfate 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.016 mg/ml
6,129,889	-				-0.2
6,129,907	+				-0.1
6,129,913	+				-0.3
6,130,025	-		CA265_RS25180	0.23	-0.9
6,130,025	-		CA265_RS25180	0.23	+0.6
6,130,054	-		CA265_RS25180	0.29	+0.3
6,130,067	-		CA265_RS25180	0.31	-0.6
6,130,076	-		CA265_RS25180	0.32	+0.5
6,130,182	-		CA265_RS25180	0.51	+1.0
6,130,195	-		CA265_RS25180	0.54	-0.4
6,130,237	+		CA265_RS25180	0.61	-0.5
6,130,238	-		CA265_RS25180	0.61	+0.9
6,130,262	+		CA265_RS25180	0.65	-0.0
6,130,304	-		CA265_RS25180	0.73	+2.0
6,130,426	+				+1.2
6,130,426	+				-0.3
6,130,486	-				+1.0
6,130,502	+				+1.1
6,130,513	+				-2.0
6,130,574	+				-0.8
6,130,575	-				-0.4
6,130,630	-				+0.2
6,130,652	+				+0.2
6,130,704	-				+0.1
6,130,711	-				+0.3
6,130,728	+				+0.0
6,130,739	-				-0.5
6,130,761	-				-0.4
6,130,761	-				+0.1
6,131,085	+				+0.8
6,131,138	-		CA265_RS25185	0.11	-0.5
6,132,207	-		CA265_RS25185	0.48	-1.2
6,132,213	+		CA265_RS25185	0.48	-0.8
6,132,354	-		CA265_RS25185	0.53	-0.3
6,133,111	-		CA265_RS25185	0.80	-1.2
6,133,704	+				-0.9
6,133,729	-				+0.5
6,133,796	-				-0.3
6,133,796	-				+1.4
6,133,796	-				+0.2
6,133,796	-				-3.7
6,133,936	-				-0.1
6,133,936	-				-0.3
6,133,936	-				-1.1
6,133,946	+				+0.2
6,133,952	-				-0.8
6,133,959	+				+0.7
6,133,960	-				-0.4
6,133,969	+				+1.1
6,134,013	+		CA265_RS25190	0.11	+0.2
6,134,030	-		CA265_RS25190	0.14	+0.3
6,134,051	+		CA265_RS25190	0.18	+0.4
6,134,097	+		CA265_RS25190	0.26	-0.1
6,134,173	+		CA265_RS25190	0.38	+0.5
6,134,178	+		CA265_RS25190	0.39	+0.6
6,134,179	-		CA265_RS25190	0.39	-0.5
6,134,211	+		CA265_RS25190	0.45	+0.7
6,134,212	-		CA265_RS25190	0.45	+0.0
6,134,212	-		CA265_RS25190	0.45	+0.1
6,134,212	-		CA265_RS25190	0.45	+0.2
6,134,261	+		CA265_RS25190	0.53	+0.2
6,134,286	+		CA265_RS25190	0.57	+0.2
6,134,333	-		CA265_RS25190	0.65	-0.9
6,134,371	-		CA265_RS25190	0.72	+0.3
6,134,375	+		CA265_RS25190	0.72	-0.7
6,134,397	-		CA265_RS25190	0.76	-0.6
6,134,397	-		CA265_RS25190	0.76	-0.9
6,134,397	-		CA265_RS25190	0.76	+0.1
6,134,402	-		CA265_RS25190	0.77	+1.3
6,134,482	+				-0.5
6,134,496	+				-0.2
6,134,501	-				-0.8
6,134,515	+				+0.0
6,134,577	-				+0.1
6,134,577	-				-0.3
6,134,579	-				+0.0