Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS20020

Experiment: R2A with Polymyxin B sulfate 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.016 mg/ml
4,949,887	+				+2.2
4,949,888	-				+0.3
4,949,888	-				-0.6
4,949,918	-				+0.2
4,950,006	+				+0.2
4,950,006	+				+0.6
4,950,107	+				+0.0
4,950,108	-				-0.5
4,950,110	-				-1.3
4,950,149	+				-0.1
4,950,220	+		CA265_RS20020	0.16	+0.5
4,950,277	+		CA265_RS20020	0.23	+1.0
4,950,391	+		CA265_RS20020	0.36	+0.4
4,950,392	-		CA265_RS20020	0.36	-0.5
4,950,524	+		CA265_RS20020	0.52	-0.4
4,950,528	+		CA265_RS20020	0.53	-0.2
4,950,528	+		CA265_RS20020	0.53	+1.8
4,950,553	+		CA265_RS20020	0.56	+0.1
4,950,554	-		CA265_RS20020	0.56	+0.8
4,950,554	-		CA265_RS20020	0.56	-0.4
4,950,567	-		CA265_RS20020	0.57	-2.1
4,950,567	-		CA265_RS20020	0.57	-0.6
4,950,573	+		CA265_RS20020	0.58	+0.9
4,950,574	-		CA265_RS20020	0.58	+1.4
4,950,578	+		CA265_RS20020	0.59	+0.5
4,950,599	-		CA265_RS20020	0.61	+2.4
4,950,599	-		CA265_RS20020	0.61	-0.3
4,950,656	+		CA265_RS20020	0.68	-1.3
4,950,695	+		CA265_RS20020	0.73	-0.5
4,950,700	-		CA265_RS20020	0.73	-0.1
4,950,755	-		CA265_RS20020	0.80	-2.1
4,950,818	-		CA265_RS20020	0.87	-0.6
4,950,820	-		CA265_RS20020	0.88	-2.5
4,950,867	-				+1.0
4,950,867	-				+0.4
4,950,890	+				-1.3
4,950,895	-				-0.4
4,950,923	-				-0.7
4,951,017	+				+1.1
4,951,026	+				+1.7
4,951,046	-				+0.1
4,951,121	-				+0.6
4,951,164	+				+1.6
4,951,206	+		CA265_RS20025	0.10	+0.2
4,951,222	+		CA265_RS20025	0.11	+0.6
4,951,222	+		CA265_RS20025	0.11	-0.1
4,951,223	-		CA265_RS20025	0.11	+0.1
4,951,223	-		CA265_RS20025	0.11	-0.1
4,951,233	+		CA265_RS20025	0.12	-0.1
4,951,233	+		CA265_RS20025	0.12	+0.1
4,951,233	+		CA265_RS20025	0.12	+0.8
4,951,234	-		CA265_RS20025	0.12	+1.2
4,951,299	-		CA265_RS20025	0.16	+1.1
4,951,375	+		CA265_RS20025	0.20	-0.1
4,951,401	+		CA265_RS20025	0.22	+1.0
4,951,412	-		CA265_RS20025	0.22	+0.3
4,951,523	+		CA265_RS20025	0.29	+1.2
4,951,579	-		CA265_RS20025	0.32	-0.7
4,951,582	-		CA265_RS20025	0.32	-0.2
4,951,753	+		CA265_RS20025	0.43	+0.3
4,951,753	+		CA265_RS20025	0.43	-0.3
4,951,783	+		CA265_RS20025	0.44	-0.1
4,951,792	+		CA265_RS20025	0.45	+0.6
4,951,793	-		CA265_RS20025	0.45	-0.4
4,951,863	-		CA265_RS20025	0.49	+0.8