Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS16695

Experiment: R2A with Polymyxin B sulfate 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.016 mg/ml
4,190,428	-		CA265_RS16690	0.40	+0.2
4,190,428	-		CA265_RS16690	0.40	+1.0
4,190,656	-		CA265_RS16690	0.61	-1.1
4,190,657	+		CA265_RS16690	0.61	-0.6
4,190,658	-		CA265_RS16690	0.61	+0.8
4,190,725	+		CA265_RS16690	0.67	-0.5
4,190,755	+		CA265_RS16690	0.70	-0.0
4,190,758	+		CA265_RS16690	0.70	+0.8
4,190,923	-		CA265_RS16690	0.85	+1.7
4,190,957	+		CA265_RS16690	0.88	-0.4
4,191,013	-				-0.0
4,191,031	+				-1.6
4,191,085	-				+0.1
4,191,085	-				+0.7
4,191,089	-				+0.1
4,191,089	-				+0.9
4,191,093	+				-0.5
4,191,100	-				+0.8
4,191,154	-				+0.2
4,191,217	+				+0.2
4,191,245	+				-0.7
4,191,246	-				+0.2
4,191,251	-				+0.5
4,191,327	+		CA265_RS16695	0.13	-0.0
4,191,357	+		CA265_RS16695	0.20	+0.1
4,191,362	-		CA265_RS16695	0.21	+0.3
4,191,483	-		CA265_RS16695	0.49	-1.8
4,191,526	+		CA265_RS16695	0.60	+0.7
4,191,551	-		CA265_RS16695	0.65	+0.7
4,191,609	+		CA265_RS16695	0.79	+0.9
4,191,683	-				+0.8
4,191,728	+				-0.3
4,191,729	-				-0.7
4,191,774	+				-0.6
4,191,793	-				+0.3
4,191,815	+				-0.1
4,191,815	+				-0.9
4,191,816	-				-0.4
4,191,826	-				+0.7
4,191,837	+				+0.1
4,191,870	+				-0.1
4,191,909	+				+0.2
4,192,060	+		CA265_RS16700	0.21	-0.1
4,192,061	-		CA265_RS16700	0.22	+0.4
4,192,061	-		CA265_RS16700	0.22	-2.1
4,192,075	+		CA265_RS16700	0.25	+0.8
4,192,076	-		CA265_RS16700	0.25	-0.5
4,192,076	-		CA265_RS16700	0.25	+0.1
4,192,147	+		CA265_RS16700	0.42	+1.0
4,192,147	+		CA265_RS16700	0.42	-0.1
4,192,147	+		CA265_RS16700	0.42	+0.3
4,192,148	-		CA265_RS16700	0.42	-0.7
4,192,182	+		CA265_RS16700	0.51	-0.6
4,192,211	-		CA265_RS16700	0.58	-0.4
4,192,220	+		CA265_RS16700	0.60	-0.2
4,192,276	+		CA265_RS16700	0.73	+0.2
4,192,298	+		CA265_RS16700	0.78	+0.3
4,192,385	+				-0.7
4,192,400	+				+0.9
4,192,408	-				+0.4
4,192,408	-				-1.0
4,192,477	-				+2.0
4,192,556	+				-0.2
4,192,563	-				+0.6
4,192,615	+				+0.4
4,192,616	+				+0.5
4,192,659	+				-0.7