Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_4701

Experiment: D-Ribose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Ribose (C)
5,393	-				+1.1
5,409	-				-0.7
5,423	+				+0.6
5,423	+				+0.7
5,423	+				+0.8
5,423	+				-0.6
5,423	+				-0.6
5,424	-				-0.0
5,424	-				+1.0
5,424	-				-0.9
5,508	+				+1.1
5,508	+				+0.1
5,559	+				+1.0
5,559	+				-0.5
5,559	+				-0.5
5,559	+				-0.0
5,559	+				+0.4
5,560	-				-0.7
5,560	-				-2.4
5,560	-				-1.3
5,560	-				-0.4
5,560	-				+0.5
5,560	-				+0.0
5,560	-				-0.4
5,588	+				+0.9
5,588	+				+0.1
5,588	+				+0.7
5,588	+				+0.5
5,588	+				+0.0
5,588	+				+0.6
5,588	+				+0.7
5,588	+				+0.5
5,588	+				+0.3
5,589	-				-0.7
5,589	-				-1.0
5,589	-				-0.0
5,589	-				-0.2
5,589	-				+0.9
5,589	-				-2.8
5,589	-				-0.0
5,593	+				-0.7
5,593	+				+0.8
5,593	+				+0.1
5,593	+				+0.0
5,593	+				-0.0
5,593	+				+1.0
5,593	+				-0.8
5,594	-				-0.9
5,594	-				-0.4
5,599	+				-0.4
5,600	-				-0.7
5,600	-				+0.5
5,618	+				-1.3
5,646	+				+1.8
5,646	+				-1.6
5,646	+				+0.4
5,646	+				-0.6
5,646	+				-0.1
5,646	+				-0.0
5,646	+				+0.2
5,646	+				-1.1
5,646	+				-1.2
5,647	-				-1.0
5,647	-				-1.6
5,647	-				-0.4
5,647	-				-0.6
5,647	-				-0.3
5,760	-				+1.1
5,760	-				+0.6
5,760	-				-1.0
5,936	+		Ac3H11_4701	0.25	-0.4
5,937	-		Ac3H11_4701	0.26	-0.3
6,012	+		Ac3H11_4701	0.33	-1.1
6,012	+		Ac3H11_4701	0.33	-1.1
6,012	+		Ac3H11_4701	0.33	+0.4
6,012	+		Ac3H11_4701	0.33	-0.5
6,012	+		Ac3H11_4701	0.33	-1.3
6,012	+		Ac3H11_4701	0.33	-0.0
6,012	+		Ac3H11_4701	0.33	-0.4
6,012	+		Ac3H11_4701	0.33	+0.3
6,012	+		Ac3H11_4701	0.33	-1.5
6,012	+		Ac3H11_4701	0.33	-0.7
6,012	+		Ac3H11_4701	0.33	+0.2
6,012	+		Ac3H11_4701	0.33	-0.3
6,012	+		Ac3H11_4701	0.33	+0.8
6,012	+		Ac3H11_4701	0.33	+0.2
6,012	+		Ac3H11_4701	0.33	-0.7
6,013	-		Ac3H11_4701	0.33	-1.0
6,013	-		Ac3H11_4701	0.33	+0.2
6,013	-		Ac3H11_4701	0.33	+0.4
6,013	-		Ac3H11_4701	0.33	-0.3
6,013	-		Ac3H11_4701	0.33	-0.9
6,013	-		Ac3H11_4701	0.33	-0.5
6,013	-		Ac3H11_4701	0.33	+0.7
6,013	-		Ac3H11_4701	0.33	-0.4
6,013	-		Ac3H11_4701	0.33	-0.0
6,013	-		Ac3H11_4701	0.33	-1.0
6,013	-		Ac3H11_4701	0.33	-1.2
6,013	-		Ac3H11_4701	0.33	-0.1
6,013	-		Ac3H11_4701	0.33	-2.1
6,013	-		Ac3H11_4701	0.33	-0.1
6,013	-		Ac3H11_4701	0.33	-0.1
6,013	-		Ac3H11_4701	0.33	-1.2
6,013	-		Ac3H11_4701	0.33	+0.2
6,284	+		Ac3H11_4701	0.58	+0.7
6,284	+		Ac3H11_4701	0.58	-2.1
6,285	-		Ac3H11_4701	0.58	-0.3
6,285	-		Ac3H11_4701	0.58	+0.7
6,321	+		Ac3H11_4701	0.61	-0.3
6,321	+		Ac3H11_4701	0.61	-0.5
6,321	+		Ac3H11_4701	0.61	-0.1
6,321	+		Ac3H11_4701	0.61	-0.6
6,321	+		Ac3H11_4701	0.61	-3.9
6,321	+		Ac3H11_4701	0.61	-0.6
6,321	+		Ac3H11_4701	0.61	-0.8
6,321	+		Ac3H11_4701	0.61	+1.7
6,321	+		Ac3H11_4701	0.61	+0.2
6,322	-		Ac3H11_4701	0.61	-0.0
6,322	-		Ac3H11_4701	0.61	-0.2
6,322	-		Ac3H11_4701	0.61	+0.5
6,322	-		Ac3H11_4701	0.61	-0.3
6,322	-		Ac3H11_4701	0.61	-1.3
6,322	-		Ac3H11_4701	0.61	-1.0
6,322	-		Ac3H11_4701	0.61	+1.1
6,322	-		Ac3H11_4701	0.61	+0.2
6,322	-		Ac3H11_4701	0.61	-0.4
6,322	-		Ac3H11_4701	0.61	+0.3
6,322	-		Ac3H11_4701	0.61	-0.3
6,322	-		Ac3H11_4701	0.61	-0.5
6,322	-		Ac3H11_4701	0.61	-2.7
6,322	-		Ac3H11_4701	0.61	-0.8
6,378	+		Ac3H11_4701	0.66	-0.6
6,378	+		Ac3H11_4701	0.66	-0.6
6,378	+		Ac3H11_4701	0.66	+1.4
6,438	+		Ac3H11_4701	0.72	+0.3
6,438	+		Ac3H11_4701	0.72	-0.0
6,439	-		Ac3H11_4701	0.72	-0.9
6,439	-		Ac3H11_4701	0.72	-1.7
6,439	-		Ac3H11_4701	0.72	-1.4
6,439	-		Ac3H11_4701	0.72	-0.9
6,470	+		Ac3H11_4701	0.75	-1.0
6,471	-		Ac3H11_4701	0.75	-1.5
6,696	+				+0.7
6,696	+				-0.2
6,696	+				-0.4
6,696	+				+0.7
6,696	+				+1.0
6,696	+				+0.3
6,697	-				-0.7
6,697	-				-0.3
6,697	-				-0.1
6,697	-				-1.1
6,697	-				-0.8
6,697	-				-1.4
6,697	-				-2.2
6,697	-				-0.2
6,697	-				+0.2
6,697	-				-0.2
6,697	-				-0.7
6,697	-				-0.5
6,697	-				-0.5
6,697	-				-2.5
6,697	-				-0.2
6,697	-				-0.3
6,715	+				-0.2
6,715	+				-0.4
6,715	+				-0.4
6,715	+				+0.3
6,715	+				-0.5
6,715	+				+0.0
6,715	+				-0.0
6,715	+				-1.4
6,716	-				-0.5
6,716	-				+0.9
6,716	-				+0.0
6,716	-				-0.8
6,716	-				-0.3
6,716	-				-2.0
6,716	-				+0.3
6,716	-				+0.9
6,719	+				+0.5
6,719	+				-1.0
6,719	+				+0.1
6,719	+				+0.8
6,719	+				-1.0
6,719	+				-0.4
6,719	+				-0.1
6,719	+				-0.4
6,719	+				-1.2
6,719	+				+0.6
6,719	+				-1.3
6,719	+				-0.7
6,719	+				-0.5
6,719	+				+0.3
6,719	+				-0.6
6,719	+				+0.0
6,719	+				-0.6
6,720	-				-1.4
6,720	-				-2.0
6,720	-				-0.8
6,720	-				-1.6
6,720	-				+0.1
6,720	-				-0.3
6,720	-				-2.7
6,720	-				+0.3
6,720	-				-1.5
6,720	-				-1.0
6,720	-				-0.2
6,720	-				-0.4
6,720	-				-0.4
6,720	-				+0.2
6,720	-				-1.3
6,720	-				-1.7
6,720	-				+0.3
6,720	-				-0.4
6,748	+				-0.1
6,748	+				+0.4
6,749	-				-1.5
6,749	-				-0.3
6,753	+				+1.7
6,753	+				-0.3
6,753	+				-1.9
6,753	+				+0.4
6,753	+				-1.0
6,753	+				-1.5
6,753	+				-1.0
6,753	+				-0.5
6,753	+				-0.3
6,753	+				-0.6
6,753	+				+0.2
6,753	+				-1.1
6,754	-				-0.4
6,754	-				-1.2
6,754	-				-1.5
6,754	-				-1.5
6,754	-				+0.3
6,754	-				-0.5
6,754	-				-0.1
6,754	-				-0.6
6,854	+				+0.5
6,854	+				-0.5
6,854	+				-0.0
6,854	+				+1.1
6,854	+				-0.3
6,854	+				+1.0
6,854	+				-0.7
6,854	+				-0.7
6,854	+				-0.9
6,854	+				-2.3
6,854	+				+0.1
6,854	+				-1.2
6,854	+				-0.0
6,854	+				+0.2
6,854	+				+0.2
6,854	+				-0.5
6,854	+				+0.1
6,854	+				+1.2
6,854	+				-0.7
6,854	+				-0.0
6,854	+				-0.5
6,854	+				-1.0
6,855	-				-1.0
6,855	-				-0.4
6,855	-				-1.5
6,855	-				-0.8
6,855	-				-1.2
6,855	-				+0.1
6,855	-				-0.3
6,855	-				-1.1
6,855	-				-2.6
6,855	-				+0.3
6,855	-				-1.0
6,855	-				-0.6
6,855	-				+0.6
6,855	-				+0.4
6,855	-				-0.8
6,855	-				-1.9
6,855	-				-0.3
6,855	-				-0.3
6,899	-				-1.8
6,920	-				+0.3
7,076	+				-0.3
7,076	+				-0.4
7,076	+				-0.2
7,076	+				-1.2
7,076	+				+0.1
7,076	+				-0.2
7,077	-				-1.8
7,077	-				+0.5
7,077	-				-1.2
7,077	-				-0.2
7,077	-				+0.2
7,077	-				-0.9
7,077	-				-1.0
7,077	-				+0.3
7,077	-				+0.4
7,077	-				+0.5
7,078	+				+0.2
7,078	+				-0.8
7,078	+				-0.2
7,078	+				+0.1
7,078	+				-0.0
7,079	-				+1.2
7,079	-				-0.4
7,079	-				+0.8
7,079	-				+0.0
7,079	-				-1.2
7,079	-				-0.6
7,167	+				+0.4
7,167	+				-1.2
7,177	+				+0.1
7,189	-				+0.1
7,267	+				-0.5
7,268	-				-1.7
7,268	-				-3.2
7,324	+				-0.2
7,351	+				-0.1
7,351	+				-1.1
7,352	-				-1.6
7,352	-				-0.6
7,359	-				+0.1
7,359	-				-0.8
7,367	+				+0.6
7,368	-				+0.1
7,382	+				-0.6
7,383	-				+0.4
7,383	-				-0.2
7,385	+				-1.2
7,385	+				-0.9
7,385	+				-0.0
7,386	-				-0.9
7,408	+				-0.1
7,408	+				-0.1
7,408	+				-0.6
7,408	+				-1.5
7,408	+				-1.7
7,408	+				-0.3
7,408	+				-1.4
7,408	+				+0.5
7,408	+				-0.7
7,408	+				-0.0
7,408	+				-0.5
7,409	-				-1.0
7,409	-				+0.9
7,409	-				-1.5
7,409	-				-2.2
7,409	-				+0.9
7,409	-				-1.1
7,409	-				-0.8
7,453	+		Ac3H11_4702	0.14	-0.2
7,454	-		Ac3H11_4702	0.14	-0.2
7,454	-		Ac3H11_4702	0.14	-1.4
7,454	-		Ac3H11_4702	0.14	-0.3
7,504	+		Ac3H11_4702	0.22	+0.4
7,539	+		Ac3H11_4702	0.27	-1.0
7,539	+		Ac3H11_4702	0.27	-0.9
7,539	+		Ac3H11_4702	0.27	-1.3
7,540	-		Ac3H11_4702	0.27	-2.4
7,552	+		Ac3H11_4702	0.29	-0.9
7,552	+		Ac3H11_4702	0.29	+0.3
7,553	-		Ac3H11_4702	0.29	+0.6
7,569	-		Ac3H11_4702	0.32	-0.5
7,624	+		Ac3H11_4702	0.40	-0.4
7,624	+		Ac3H11_4702	0.40	+0.3
7,625	-		Ac3H11_4702	0.40	-1.0
7,625	-		Ac3H11_4702	0.40	-1.4
7,625	-		Ac3H11_4702	0.40	-0.5
7,662	+		Ac3H11_4702	0.46	-0.5
7,662	+		Ac3H11_4702	0.46	+0.2
7,662	+		Ac3H11_4702	0.46	-2.3
7,663	-		Ac3H11_4702	0.46	-1.5
7,663	-		Ac3H11_4702	0.46	-0.3
7,692	-		Ac3H11_4702	0.50	-0.0
7,692	-		Ac3H11_4702	0.50	-0.3
7,694	+		Ac3H11_4702	0.51	-0.4
7,694	+		Ac3H11_4702	0.51	-1.1
7,725	-		Ac3H11_4702	0.55	-0.0