Experiment: D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4316 and Ac3H11_4317 overlap by 4 nucleotides Ac3H11_4317 and Ac3H11_4318 overlap by 4 nucleotides Ac3H11_4318 and Ac3H11_4319 are separated by 84 nucleotides
Ac3H11_4316 - Alkanal monooxygenase alpha chain (EC 1.14.14.3), at 92,370 to 93,410
_4316
Ac3H11_4317 - FIG00537953: hypothetical protein, at 93,407 to 94,087
_4317
Ac3H11_4318 - Bll6900 protein, at 94,084 to 94,698
_4318
Ac3H11_4319 - FIG00581545: hypothetical protein, at 94,783 to 95,517
_4319
Position (kb)
93
94
95 Strain fitness (log2 ratio)
-2
-1
0
1 at 92.713 kb on - strand, within Ac3H11_4316 at 92.713 kb on - strand, within Ac3H11_4316 at 92.956 kb on - strand, within Ac3H11_4316 at 92.956 kb on - strand, within Ac3H11_4316 at 93.156 kb on + strand, within Ac3H11_4316 at 93.156 kb on + strand, within Ac3H11_4316 at 93.156 kb on + strand, within Ac3H11_4316 at 93.157 kb on - strand, within Ac3H11_4316 at 93.549 kb on - strand, within Ac3H11_4317 at 93.665 kb on + strand, within Ac3H11_4317 at 93.665 kb on + strand, within Ac3H11_4317 at 93.665 kb on + strand, within Ac3H11_4317 at 93.666 kb on - strand, within Ac3H11_4317 at 93.666 kb on - strand, within Ac3H11_4317 at 93.666 kb on - strand, within Ac3H11_4317 at 93.666 kb on - strand, within Ac3H11_4317 at 93.756 kb on - strand, within Ac3H11_4317 at 93.764 kb on + strand, within Ac3H11_4317 at 93.764 kb on + strand, within Ac3H11_4317 at 93.765 kb on - strand, within Ac3H11_4317 at 94.193 kb on + strand, within Ac3H11_4318 at 94.193 kb on + strand, within Ac3H11_4318 at 94.207 kb on + strand, within Ac3H11_4318 at 94.208 kb on - strand, within Ac3H11_4318 at 94.208 kb on - strand, within Ac3H11_4318 at 94.247 kb on - strand, within Ac3H11_4318 at 94.315 kb on + strand, within Ac3H11_4318 at 94.315 kb on + strand, within Ac3H11_4318 at 94.393 kb on + strand, within Ac3H11_4318 at 94.394 kb on - strand, within Ac3H11_4318 at 94.394 kb on - strand, within Ac3H11_4318 at 94.394 kb on - strand, within Ac3H11_4318 at 94.394 kb on - strand, within Ac3H11_4318 at 95.012 kb on + strand, within Ac3H11_4319 at 95.012 kb on + strand, within Ac3H11_4319 at 95.013 kb on - strand, within Ac3H11_4319 at 95.013 kb on - strand, within Ac3H11_4319 at 95.013 kb on - strand, within Ac3H11_4319
Per-strain Table
Position Strand Gene LocusTag Fraction D-Ribose (C) remove 92,713 - Ac3H11_4316 0.33 +0.6 92,713 - Ac3H11_4316 0.33 +0.2 92,956 - Ac3H11_4316 0.56 +1.1 92,956 - Ac3H11_4316 0.56 -0.2 93,156 + Ac3H11_4316 0.76 +1.0 93,156 + Ac3H11_4316 0.76 -0.1 93,156 + Ac3H11_4316 0.76 -0.4 93,157 - Ac3H11_4316 0.76 +0.8 93,549 - Ac3H11_4317 0.21 +0.0 93,665 + Ac3H11_4317 0.38 +0.8 93,665 + Ac3H11_4317 0.38 -0.9 93,665 + Ac3H11_4317 0.38 +0.5 93,666 - Ac3H11_4317 0.38 +1.7 93,666 - Ac3H11_4317 0.38 -0.2 93,666 - Ac3H11_4317 0.38 -0.1 93,666 - Ac3H11_4317 0.38 +0.4 93,756 - Ac3H11_4317 0.51 +0.4 93,764 + Ac3H11_4317 0.52 +0.8 93,764 + Ac3H11_4317 0.52 +0.3 93,765 - Ac3H11_4317 0.53 +0.9 94,193 + Ac3H11_4318 0.18 -2.5 94,193 + Ac3H11_4318 0.18 -0.0 94,207 + Ac3H11_4318 0.20 +0.7 94,208 - Ac3H11_4318 0.20 +0.1 94,208 - Ac3H11_4318 0.20 +0.2 94,247 - Ac3H11_4318 0.27 +0.1 94,315 + Ac3H11_4318 0.38 +1.3 94,315 + Ac3H11_4318 0.38 +0.6 94,393 + Ac3H11_4318 0.50 -0.4 94,394 - Ac3H11_4318 0.50 +0.0 94,394 - Ac3H11_4318 0.50 -0.7 94,394 - Ac3H11_4318 0.50 +0.4 94,394 - Ac3H11_4318 0.50 +0.4 95,012 + Ac3H11_4319 0.31 +0.7 95,012 + Ac3H11_4319 0.31 -0.0 95,013 - Ac3H11_4319 0.31 -0.0 95,013 - Ac3H11_4319 0.31 -0.2 95,013 - Ac3H11_4319 0.31 -0.7
Or see this region's nucleotide sequence