Experiment: D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4302 and Ac3H11_4303 are separated by 62 nucleotides Ac3H11_4303 and Ac3H11_4304 are separated by 509 nucleotides
Ac3H11_4302 - Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-), at 76,825 to 78,465
_4302
Ac3H11_4303 - Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1), at 78,528 to 79,787
_4303
Ac3H11_4304 - Rhodanese-like domain protein, at 80,297 to 80,776
_4304
Position (kb) 78
79
80 Strain fitness (log2 ratio) -2
-1
0
1 at 77.560 kb on + strand, within Ac3H11_4302 at 77.724 kb on + strand, within Ac3H11_4302 at 77.724 kb on + strand, within Ac3H11_4302 at 77.725 kb on - strand, within Ac3H11_4302 at 77.725 kb on - strand, within Ac3H11_4302 at 77.797 kb on + strand, within Ac3H11_4302 at 77.958 kb on - strand, within Ac3H11_4302 at 78.474 kb on + strand at 78.475 kb on - strand at 78.482 kb on + strand at 78.483 kb on - strand at 78.834 kb on + strand, within Ac3H11_4303 at 78.835 kb on - strand, within Ac3H11_4303 at 78.927 kb on + strand, within Ac3H11_4303 at 78.928 kb on - strand, within Ac3H11_4303 at 78.936 kb on + strand, within Ac3H11_4303 at 78.937 kb on - strand, within Ac3H11_4303 at 78.997 kb on - strand, within Ac3H11_4303 at 79.035 kb on + strand, within Ac3H11_4303 at 79.035 kb on + strand, within Ac3H11_4303 at 79.036 kb on - strand, within Ac3H11_4303 at 79.068 kb on + strand, within Ac3H11_4303 at 79.069 kb on - strand, within Ac3H11_4303 at 79.125 kb on + strand, within Ac3H11_4303 at 79.317 kb on + strand, within Ac3H11_4303 at 79.317 kb on + strand, within Ac3H11_4303 at 79.317 kb on + strand, within Ac3H11_4303 at 79.318 kb on - strand, within Ac3H11_4303 at 79.318 kb on - strand, within Ac3H11_4303 at 79.441 kb on - strand, within Ac3H11_4303 at 79.441 kb on - strand, within Ac3H11_4303 at 79.461 kb on + strand, within Ac3H11_4303 at 79.461 kb on + strand, within Ac3H11_4303 at 79.461 kb on + strand, within Ac3H11_4303 at 79.461 kb on + strand, within Ac3H11_4303 at 79.581 kb on + strand, within Ac3H11_4303 at 79.581 kb on + strand, within Ac3H11_4303 at 79.582 kb on - strand, within Ac3H11_4303 at 79.582 kb on - strand, within Ac3H11_4303 at 79.644 kb on + strand, within Ac3H11_4303 at 79.645 kb on - strand, within Ac3H11_4303 at 79.645 kb on - strand, within Ac3H11_4303 at 79.740 kb on + strand at 79.740 kb on + strand at 79.740 kb on + strand at 79.740 kb on + strand at 79.741 kb on - strand at 79.741 kb on - strand at 79.741 kb on - strand at 79.741 kb on - strand at 79.741 kb on - strand at 79.741 kb on - strand at 79.797 kb on - strand at 79.797 kb on - strand at 79.930 kb on + strand at 79.930 kb on + strand at 79.931 kb on - strand at 79.931 kb on - strand at 80.250 kb on + strand at 80.250 kb on + strand at 80.378 kb on + strand, within Ac3H11_4304 at 80.378 kb on + strand, within Ac3H11_4304
Per-strain Table
Position Strand Gene LocusTag Fraction D-Ribose (C) remove 77,560 + Ac3H11_4302 0.45 +0.3 77,724 + Ac3H11_4302 0.55 +0.6 77,724 + Ac3H11_4302 0.55 +0.1 77,725 - Ac3H11_4302 0.55 +0.6 77,725 - Ac3H11_4302 0.55 -0.0 77,797 + Ac3H11_4302 0.59 +0.7 77,958 - Ac3H11_4302 0.69 +0.1 78,474 + +0.1 78,475 - -0.7 78,482 + -0.2 78,483 - +0.0 78,834 + Ac3H11_4303 0.24 +1.6 78,835 - Ac3H11_4303 0.24 -1.3 78,927 + Ac3H11_4303 0.32 -0.1 78,928 - Ac3H11_4303 0.32 +0.6 78,936 + Ac3H11_4303 0.32 +0.4 78,937 - Ac3H11_4303 0.32 +0.1 78,997 - Ac3H11_4303 0.37 +0.9 79,035 + Ac3H11_4303 0.40 -0.1 79,035 + Ac3H11_4303 0.40 +0.9 79,036 - Ac3H11_4303 0.40 +0.8 79,068 + Ac3H11_4303 0.43 +0.1 79,069 - Ac3H11_4303 0.43 +0.7 79,125 + Ac3H11_4303 0.47 -0.4 79,317 + Ac3H11_4303 0.63 -0.8 79,317 + Ac3H11_4303 0.63 +0.1 79,317 + Ac3H11_4303 0.63 +1.4 79,318 - Ac3H11_4303 0.63 -0.1 79,318 - Ac3H11_4303 0.63 +0.7 79,441 - Ac3H11_4303 0.72 -0.0 79,441 - Ac3H11_4303 0.72 +0.2 79,461 + Ac3H11_4303 0.74 +1.5 79,461 + Ac3H11_4303 0.74 +1.4 79,461 + Ac3H11_4303 0.74 +1.1 79,461 + Ac3H11_4303 0.74 -0.2 79,581 + Ac3H11_4303 0.84 +0.6 79,581 + Ac3H11_4303 0.84 +0.0 79,582 - Ac3H11_4303 0.84 -0.3 79,582 - Ac3H11_4303 0.84 +0.8 79,644 + Ac3H11_4303 0.89 -0.0 79,645 - Ac3H11_4303 0.89 -0.3 79,645 - Ac3H11_4303 0.89 -0.8 79,740 + -0.4 79,740 + +0.8 79,740 + -0.4 79,740 + +0.0 79,741 - +0.1 79,741 - -0.1 79,741 - -0.0 79,741 - -0.5 79,741 - +0.0 79,741 - -0.7 79,797 - +0.1 79,797 - -0.0 79,930 + +0.1 79,930 + +0.2 79,931 - +0.3 79,931 - +0.0 80,250 + -0.2 80,250 + -0.4 80,378 + Ac3H11_4304 0.17 -1.9 80,378 + Ac3H11_4304 0.17 -1.1
Or see this region's nucleotide sequence