Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS12570

Experiment: Fumarate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fumarate (C)
2,716,349	+		ABIE51_RS12565	0.31	-0.0
2,716,349	+		ABIE51_RS12565	0.31	+1.7
2,716,349	+		ABIE51_RS12565	0.31	-0.5
2,716,350	-		ABIE51_RS12565	0.31	-1.4
2,716,350	-		ABIE51_RS12565	0.31	-0.0
2,716,350	-		ABIE51_RS12565	0.31	+0.5
2,716,350	-		ABIE51_RS12565	0.31	-0.5
2,716,351	+		ABIE51_RS12565	0.31	+0.2
2,716,351	+		ABIE51_RS12565	0.31	-0.7
2,716,352	-		ABIE51_RS12565	0.31	+1.3
2,716,352	-		ABIE51_RS12565	0.31	-0.9
2,716,352	-		ABIE51_RS12565	0.31	+0.2
2,716,352	-		ABIE51_RS12565	0.31	-0.0
2,716,352	-		ABIE51_RS12565	0.31	+0.9
2,716,352	-		ABIE51_RS12565	0.31	+0.5
2,716,411	+		ABIE51_RS12565	0.36	+0.1
2,716,411	+		ABIE51_RS12565	0.36	-1.5
2,716,822	+		ABIE51_RS12565	0.71	+0.2
2,716,823	-		ABIE51_RS12565	0.72	-1.4
2,716,823	-		ABIE51_RS12565	0.72	-1.4
2,716,828	+		ABIE51_RS12565	0.72	+1.0
2,716,828	+		ABIE51_RS12565	0.72	-0.5
2,716,828	+		ABIE51_RS12565	0.72	-0.3
2,716,828	+		ABIE51_RS12565	0.72	-0.0
2,716,828	+		ABIE51_RS12565	0.72	+0.1
2,716,828	+		ABIE51_RS12565	0.72	+0.0
2,716,828	+		ABIE51_RS12565	0.72	+0.1
2,716,828	+		ABIE51_RS12565	0.72	-0.7
2,716,828	+		ABIE51_RS12565	0.72	+0.5
2,716,828	+		ABIE51_RS12565	0.72	-2.1
2,716,828	+		ABIE51_RS12565	0.72	-0.5
2,716,828	+		ABIE51_RS12565	0.72	+0.1
2,716,829	-		ABIE51_RS12565	0.72	-0.2
2,716,829	-		ABIE51_RS12565	0.72	+0.2
2,716,829	-		ABIE51_RS12565	0.72	+1.2
2,716,829	-		ABIE51_RS12565	0.72	+0.0
2,716,829	-		ABIE51_RS12565	0.72	-1.7
2,716,829	-		ABIE51_RS12565	0.72	+0.3
2,716,829	-		ABIE51_RS12565	0.72	-1.8
2,716,829	-		ABIE51_RS12565	0.72	+0.1
2,716,829	-		ABIE51_RS12565	0.72	+0.3
2,716,829	-		ABIE51_RS12565	0.72	+0.8
2,716,829	-		ABIE51_RS12565	0.72	-0.9
2,716,829	-		ABIE51_RS12565	0.72	-0.3
2,716,837	+		ABIE51_RS12565	0.73	-1.2
2,716,837	+		ABIE51_RS12565	0.73	+0.1
2,716,918	+		ABIE51_RS12565	0.80	-0.9
2,716,919	-		ABIE51_RS12565	0.80	+1.0
2,716,948	+		ABIE51_RS12565	0.82	+1.5
2,716,948	+		ABIE51_RS12565	0.82	-0.1
2,716,948	+		ABIE51_RS12565	0.82	+0.2
2,716,949	-		ABIE51_RS12565	0.82	-1.0
2,716,949	-		ABIE51_RS12565	0.82	+0.0
2,716,949	-		ABIE51_RS12565	0.82	-0.2
2,716,949	-		ABIE51_RS12565	0.82	-0.3
2,717,128	+				-0.4
2,717,128	+				+2.1
2,717,128	+				-0.9
2,717,128	+				+0.4
2,717,129	-				+1.3
2,717,129	-				+1.2
2,717,137	+				+0.4
2,717,137	+				+1.3
2,717,186	+				-1.0
2,717,186	+				+0.2
2,717,186	+				-0.6
2,717,186	+				-0.0
2,717,186	+				-1.8
2,717,187	-				-0.7
2,717,187	-				+0.3
2,717,187	-				+0.1
2,717,291	-				+0.4
2,717,305	+				+0.6
2,717,305	+				-0.0
2,717,305	+				+0.3
2,717,305	+				+0.2
2,717,305	+				-1.2
2,717,312	-				-0.7
2,717,312	-				-1.7
2,717,312	-				-0.9
2,717,312	-				-0.3
2,717,312	-				-1.5
2,717,444	+		ABIE51_RS12570	0.15	-1.4
2,717,444	+		ABIE51_RS12570	0.15	-1.5
2,717,445	-		ABIE51_RS12570	0.15	-0.3
2,717,445	-		ABIE51_RS12570	0.15	+0.1
2,717,450	+		ABIE51_RS12570	0.15	-0.8
2,717,450	+		ABIE51_RS12570	0.15	-1.2
2,717,450	+		ABIE51_RS12570	0.15	+0.1
2,717,450	+		ABIE51_RS12570	0.15	+0.3
2,717,451	-		ABIE51_RS12570	0.15	+0.8
2,717,451	-		ABIE51_RS12570	0.15	+0.5
2,717,555	+		ABIE51_RS12570	0.28	+0.4
2,717,555	+		ABIE51_RS12570	0.28	-1.9
2,717,555	+		ABIE51_RS12570	0.28	+0.1
2,717,555	+		ABIE51_RS12570	0.28	-0.3
2,717,555	+		ABIE51_RS12570	0.28	+0.5
2,717,555	+		ABIE51_RS12570	0.28	+0.4
2,717,567	+		ABIE51_RS12570	0.30	-0.1
2,717,567	+		ABIE51_RS12570	0.30	+1.1
2,717,568	-		ABIE51_RS12570	0.30	-0.3
2,717,568	-		ABIE51_RS12570	0.30	-0.5
2,717,739	-		ABIE51_RS12570	0.51	+1.0
2,717,900	+		ABIE51_RS12570	0.71	-0.6
2,717,900	+		ABIE51_RS12570	0.71	+1.1
2,717,900	+		ABIE51_RS12570	0.71	+0.7
2,717,901	-		ABIE51_RS12570	0.71	-0.9
2,717,929	+		ABIE51_RS12570	0.75	-0.1
2,717,929	+		ABIE51_RS12570	0.75	-0.5
2,717,929	+		ABIE51_RS12570	0.75	-0.3
2,717,929	+		ABIE51_RS12570	0.75	+0.1
2,717,929	+		ABIE51_RS12570	0.75	-1.4
2,717,929	+		ABIE51_RS12570	0.75	+0.0
2,717,929	+		ABIE51_RS12570	0.75	-1.9
2,717,930	-		ABIE51_RS12570	0.75	-0.2
2,717,930	-		ABIE51_RS12570	0.75	-0.4
2,717,930	-		ABIE51_RS12570	0.75	-0.1
2,717,948	+		ABIE51_RS12570	0.77	-0.8
2,717,949	-		ABIE51_RS12570	0.77	-0.7
2,718,249	-				+0.7
2,718,249	-				-1.4
2,718,284	+				+0.7
2,718,284	+				-0.7
2,718,284	+				+0.1
2,718,284	+				+2.2
2,718,311	+				-0.0
2,718,312	-				+0.2
2,718,312	-				+1.2
2,718,688	+		ABIE51_RS12580	0.23	-0.5
2,718,688	+		ABIE51_RS12580	0.23	-1.4
2,718,689	-		ABIE51_RS12580	0.23	+1.1
2,718,689	-		ABIE51_RS12580	0.23	-0.4
2,718,689	-		ABIE51_RS12580	0.23	-0.1
2,718,697	+		ABIE51_RS12580	0.24	+0.4
2,718,697	+		ABIE51_RS12580	0.24	-0.7
2,718,808	+		ABIE51_RS12580	0.38	+2.3
2,718,808	+		ABIE51_RS12580	0.38	-0.5
2,718,808	+		ABIE51_RS12580	0.38	+0.4
2,718,808	+		ABIE51_RS12580	0.38	-0.6
2,718,809	-		ABIE51_RS12580	0.38	+0.5
2,718,809	-		ABIE51_RS12580	0.38	+0.5
2,718,809	-		ABIE51_RS12580	0.38	+0.2
2,718,809	-		ABIE51_RS12580	0.38	-1.0
2,718,809	-		ABIE51_RS12580	0.38	-2.2
2,718,809	-		ABIE51_RS12580	0.38	-0.2
2,719,028	+		ABIE51_RS12580	0.67	+0.8
2,719,028	+		ABIE51_RS12580	0.67	+0.5
2,719,028	+		ABIE51_RS12580	0.67	+1.7
2,719,029	-		ABIE51_RS12580	0.67	+0.2
2,719,051	+		ABIE51_RS12580	0.70	+1.1
2,719,051	+		ABIE51_RS12580	0.70	+0.5
2,719,052	-		ABIE51_RS12580	0.70	-0.9
2,719,052	-		ABIE51_RS12580	0.70	-0.3
2,719,052	-		ABIE51_RS12580	0.70	+0.4
2,719,052	-		ABIE51_RS12580	0.70	+0.1
2,719,052	-		ABIE51_RS12580	0.70	-0.1
2,719,052	-		ABIE51_RS12580	0.70	+0.4
2,719,052	-		ABIE51_RS12580	0.70	+1.0