Experiment: Fumarate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS02745 and ABIE51_RS02750 are separated by 100 nucleotides ABIE51_RS02750 and ABIE51_RS02755 are separated by 102 nucleotides ABIE51_RS02755 and ABIE51_RS02760 are separated by 415 nucleotides
ABIE51_RS02745: ABIE51_RS02745 - hypothetical protein, at 606,509 to 606,790
_RS02745
ABIE51_RS02750: ABIE51_RS02750 - peptide-methionine (S)-S-oxide reductase MsrA, at 606,891 to 607,397
_RS02750
ABIE51_RS02755: ABIE51_RS02755 - M20/M25/M40 family metallo-hydrolase, at 607,500 to 609,044
_RS02755
ABIE51_RS02760: ABIE51_RS02760 - M13 family metallopeptidase, at 609,460 to 611,514
_RS02760
Position (kb) 607
608
609
610 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 606.537 kb on + strand at 606.537 kb on + strand at 606.537 kb on + strand at 606.537 kb on + strand at 606.538 kb on - strand, within ABIE51_RS02745 at 606.538 kb on - strand, within ABIE51_RS02745 at 606.538 kb on - strand, within ABIE51_RS02745 at 606.994 kb on - strand, within ABIE51_RS02750 at 607.023 kb on + strand, within ABIE51_RS02750 at 607.023 kb on + strand, within ABIE51_RS02750 at 607.024 kb on - strand, within ABIE51_RS02750 at 607.167 kb on + strand, within ABIE51_RS02750 at 607.168 kb on - strand, within ABIE51_RS02750 at 607.185 kb on + strand, within ABIE51_RS02750 at 607.185 kb on + strand, within ABIE51_RS02750 at 607.185 kb on + strand, within ABIE51_RS02750 at 607.185 kb on + strand, within ABIE51_RS02750 at 607.186 kb on - strand, within ABIE51_RS02750 at 607.186 kb on - strand, within ABIE51_RS02750 at 607.186 kb on - strand, within ABIE51_RS02750 at 607.186 kb on - strand, within ABIE51_RS02750 at 607.187 kb on + strand, within ABIE51_RS02750 at 607.188 kb on - strand, within ABIE51_RS02750 at 607.323 kb on + strand, within ABIE51_RS02750 at 607.324 kb on - strand, within ABIE51_RS02750 at 607.324 kb on - strand, within ABIE51_RS02750 at 607.335 kb on + strand, within ABIE51_RS02750 at 607.335 kb on + strand, within ABIE51_RS02750 at 607.347 kb on + strand at 607.499 kb on + strand at 607.499 kb on + strand at 607.499 kb on + strand at 607.500 kb on - strand at 607.500 kb on - strand at 607.500 kb on - strand at 607.500 kb on - strand at 607.500 kb on - strand at 607.728 kb on + strand, within ABIE51_RS02755 at 607.728 kb on + strand, within ABIE51_RS02755 at 607.728 kb on + strand, within ABIE51_RS02755 at 607.728 kb on + strand, within ABIE51_RS02755 at 607.728 kb on + strand, within ABIE51_RS02755 at 607.728 kb on + strand, within ABIE51_RS02755 at 607.729 kb on - strand, within ABIE51_RS02755 at 607.729 kb on - strand, within ABIE51_RS02755 at 607.729 kb on - strand, within ABIE51_RS02755 at 607.729 kb on - strand, within ABIE51_RS02755 at 607.729 kb on - strand, within ABIE51_RS02755 at 607.729 kb on - strand, within ABIE51_RS02755 at 607.729 kb on - strand, within ABIE51_RS02755 at 607.729 kb on - strand, within ABIE51_RS02755 at 607.729 kb on - strand, within ABIE51_RS02755 at 607.845 kb on + strand, within ABIE51_RS02755 at 607.846 kb on - strand, within ABIE51_RS02755 at 607.846 kb on - strand, within ABIE51_RS02755 at 607.846 kb on - strand, within ABIE51_RS02755 at 607.848 kb on + strand, within ABIE51_RS02755 at 607.848 kb on + strand, within ABIE51_RS02755 at 607.848 kb on + strand, within ABIE51_RS02755 at 607.848 kb on + strand, within ABIE51_RS02755 at 607.848 kb on + strand, within ABIE51_RS02755 at 607.848 kb on + strand, within ABIE51_RS02755 at 607.848 kb on + strand, within ABIE51_RS02755 at 607.848 kb on + strand, within ABIE51_RS02755 at 607.848 kb on + strand, within ABIE51_RS02755 at 607.848 kb on + strand, within ABIE51_RS02755 at 607.848 kb on + strand, within ABIE51_RS02755 at 607.849 kb on - strand, within ABIE51_RS02755 at 607.849 kb on - strand, within ABIE51_RS02755 at 607.849 kb on - strand, within ABIE51_RS02755 at 607.849 kb on - strand, within ABIE51_RS02755 at 607.849 kb on - strand, within ABIE51_RS02755 at 607.849 kb on - strand, within ABIE51_RS02755 at 607.849 kb on - strand, within ABIE51_RS02755 at 607.849 kb on - strand, within ABIE51_RS02755 at 607.849 kb on - strand, within ABIE51_RS02755 at 607.849 kb on - strand, within ABIE51_RS02755 at 607.849 kb on - strand, within ABIE51_RS02755 at 607.854 kb on + strand, within ABIE51_RS02755 at 607.855 kb on - strand, within ABIE51_RS02755 at 607.855 kb on - strand, within ABIE51_RS02755 at 607.855 kb on - strand, within ABIE51_RS02755 at 607.855 kb on - strand, within ABIE51_RS02755 at 608.595 kb on + strand, within ABIE51_RS02755 at 608.691 kb on + strand, within ABIE51_RS02755 at 608.832 kb on + strand, within ABIE51_RS02755 at 608.928 kb on + strand at 608.928 kb on + strand at 608.929 kb on - strand at 608.929 kb on - strand at 608.929 kb on - strand at 608.929 kb on - strand at 608.985 kb on + strand at 608.985 kb on + strand at 608.985 kb on + strand at 608.986 kb on - strand at 608.986 kb on - strand at 608.986 kb on - strand at 608.994 kb on + strand at 609.000 kb on + strand at 609.620 kb on - strand at 609.646 kb on + strand at 609.647 kb on - strand at 609.647 kb on - strand at 609.647 kb on - strand at 609.662 kb on - strand at 609.802 kb on + strand, within ABIE51_RS02760 at 609.803 kb on - strand, within ABIE51_RS02760 at 609.803 kb on - strand, within ABIE51_RS02760 at 609.983 kb on - strand, within ABIE51_RS02760 at 610.030 kb on + strand, within ABIE51_RS02760 at 610.030 kb on + strand, within ABIE51_RS02760 at 610.030 kb on + strand, within ABIE51_RS02760 at 610.030 kb on + strand, within ABIE51_RS02760 at 610.030 kb on + strand, within ABIE51_RS02760 at 610.031 kb on - strand, within ABIE51_RS02760 at 610.031 kb on - strand, within ABIE51_RS02760 at 610.031 kb on - strand, within ABIE51_RS02760 at 610.031 kb on - strand, within ABIE51_RS02760 at 610.033 kb on + strand, within ABIE51_RS02760 at 610.033 kb on + strand, within ABIE51_RS02760 at 610.033 kb on + strand, within ABIE51_RS02760 at 610.033 kb on + strand, within ABIE51_RS02760 at 610.033 kb on + strand, within ABIE51_RS02760 at 610.034 kb on - strand, within ABIE51_RS02760 at 610.034 kb on - strand, within ABIE51_RS02760 at 610.034 kb on - strand, within ABIE51_RS02760
Per-strain Table
Position Strand Gene LocusTag Fraction Fumarate (C) remove 606,537 + +0.9 606,537 + -0.6 606,537 + +0.8 606,537 + +0.3 606,538 - ABIE51_RS02745 0.10 -0.7 606,538 - ABIE51_RS02745 0.10 +0.3 606,538 - ABIE51_RS02745 0.10 -1.1 606,994 - ABIE51_RS02750 0.20 +0.0 607,023 + ABIE51_RS02750 0.26 +0.2 607,023 + ABIE51_RS02750 0.26 +3.8 607,024 - ABIE51_RS02750 0.26 -0.4 607,167 + ABIE51_RS02750 0.54 -1.7 607,168 - ABIE51_RS02750 0.55 +1.2 607,185 + ABIE51_RS02750 0.58 +1.3 607,185 + ABIE51_RS02750 0.58 +0.3 607,185 + ABIE51_RS02750 0.58 -1.2 607,185 + ABIE51_RS02750 0.58 -0.4 607,186 - ABIE51_RS02750 0.58 -0.8 607,186 - ABIE51_RS02750 0.58 +0.8 607,186 - ABIE51_RS02750 0.58 -0.1 607,186 - ABIE51_RS02750 0.58 -0.1 607,187 + ABIE51_RS02750 0.58 -1.2 607,188 - ABIE51_RS02750 0.59 +0.6 607,323 + ABIE51_RS02750 0.85 -1.1 607,324 - ABIE51_RS02750 0.85 -1.0 607,324 - ABIE51_RS02750 0.85 +0.6 607,335 + ABIE51_RS02750 0.88 -0.1 607,335 + ABIE51_RS02750 0.88 -0.4 607,347 + +0.3 607,499 + +0.8 607,499 + +0.3 607,499 + +0.5 607,500 - +1.2 607,500 - +0.3 607,500 - -0.0 607,500 - +0.9 607,500 - +0.1 607,728 + ABIE51_RS02755 0.15 +0.8 607,728 + ABIE51_RS02755 0.15 -1.2 607,728 + ABIE51_RS02755 0.15 +0.1 607,728 + ABIE51_RS02755 0.15 +1.5 607,728 + ABIE51_RS02755 0.15 -1.1 607,728 + ABIE51_RS02755 0.15 -0.4 607,729 - ABIE51_RS02755 0.15 -0.2 607,729 - ABIE51_RS02755 0.15 +0.4 607,729 - ABIE51_RS02755 0.15 -0.2 607,729 - ABIE51_RS02755 0.15 +0.4 607,729 - ABIE51_RS02755 0.15 +1.4 607,729 - ABIE51_RS02755 0.15 -0.9 607,729 - ABIE51_RS02755 0.15 +0.2 607,729 - ABIE51_RS02755 0.15 +0.1 607,729 - ABIE51_RS02755 0.15 +0.1 607,845 + ABIE51_RS02755 0.22 -0.4 607,846 - ABIE51_RS02755 0.22 -0.8 607,846 - ABIE51_RS02755 0.22 +0.2 607,846 - ABIE51_RS02755 0.22 -0.3 607,848 + ABIE51_RS02755 0.23 +0.2 607,848 + ABIE51_RS02755 0.23 +1.0 607,848 + ABIE51_RS02755 0.23 -1.0 607,848 + ABIE51_RS02755 0.23 +0.6 607,848 + ABIE51_RS02755 0.23 +0.3 607,848 + ABIE51_RS02755 0.23 -2.1 607,848 + ABIE51_RS02755 0.23 -0.0 607,848 + ABIE51_RS02755 0.23 +0.3 607,848 + ABIE51_RS02755 0.23 +0.8 607,848 + ABIE51_RS02755 0.23 +0.5 607,848 + ABIE51_RS02755 0.23 +0.9 607,849 - ABIE51_RS02755 0.23 +0.3 607,849 - ABIE51_RS02755 0.23 -0.5 607,849 - ABIE51_RS02755 0.23 +0.9 607,849 - ABIE51_RS02755 0.23 +0.2 607,849 - ABIE51_RS02755 0.23 +1.8 607,849 - ABIE51_RS02755 0.23 -1.4 607,849 - ABIE51_RS02755 0.23 -0.9 607,849 - ABIE51_RS02755 0.23 -0.1 607,849 - ABIE51_RS02755 0.23 -0.9 607,849 - ABIE51_RS02755 0.23 +0.7 607,849 - ABIE51_RS02755 0.23 -0.5 607,854 + ABIE51_RS02755 0.23 -0.0 607,855 - ABIE51_RS02755 0.23 +0.5 607,855 - ABIE51_RS02755 0.23 +0.2 607,855 - ABIE51_RS02755 0.23 -0.4 607,855 - ABIE51_RS02755 0.23 +0.1 608,595 + ABIE51_RS02755 0.71 -1.1 608,691 + ABIE51_RS02755 0.77 -0.8 608,832 + ABIE51_RS02755 0.86 +0.4 608,928 + -1.3 608,928 + +0.7 608,929 - +2.8 608,929 - -0.2 608,929 - +0.8 608,929 - +0.8 608,985 + -0.3 608,985 + -0.4 608,985 + +0.2 608,986 - -1.7 608,986 - -0.2 608,986 - +0.0 608,994 + +0.1 609,000 + -0.3 609,620 - -1.7 609,646 + -0.8 609,647 - +0.5 609,647 - +1.3 609,647 - -0.0 609,662 - -0.9 609,802 + ABIE51_RS02760 0.17 -0.7 609,803 - ABIE51_RS02760 0.17 -0.5 609,803 - ABIE51_RS02760 0.17 -0.5 609,983 - ABIE51_RS02760 0.25 +0.5 610,030 + ABIE51_RS02760 0.28 +0.8 610,030 + ABIE51_RS02760 0.28 -0.1 610,030 + ABIE51_RS02760 0.28 +0.6 610,030 + ABIE51_RS02760 0.28 +0.5 610,030 + ABIE51_RS02760 0.28 +0.2 610,031 - ABIE51_RS02760 0.28 +0.1 610,031 - ABIE51_RS02760 0.28 -0.9 610,031 - ABIE51_RS02760 0.28 -0.1 610,031 - ABIE51_RS02760 0.28 +0.5 610,033 + ABIE51_RS02760 0.28 -0.3 610,033 + ABIE51_RS02760 0.28 +0.1 610,033 + ABIE51_RS02760 0.28 +1.4 610,033 + ABIE51_RS02760 0.28 +0.7 610,033 + ABIE51_RS02760 0.28 +0.1 610,034 - ABIE51_RS02760 0.28 -0.3 610,034 - ABIE51_RS02760 0.28 +0.4 610,034 - ABIE51_RS02760 0.28 -0.6
Or see this region's nucleotide sequence