Strain Fitness in Pantoea sp. MT58 around IAI47_16110

Experiment: Nickel (II) chloride 40 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 40 uM, aerobic
3,406,770	+				-0.1
3,406,770	+				+0.0
3,406,770	+				+0.3
3,406,770	+				-0.7
3,406,771	-				-0.1
3,406,771	-				-0.2
3,407,308	-				+0.0
3,407,308	-				+0.2
3,407,308	-				+0.2
3,407,312	-				-1.0
3,407,312	-				+1.7
3,407,312	-				-0.7
3,407,312	-				-0.6
3,407,312	-				+3.0
3,407,332	+				+0.4
3,407,347	-				-1.2
3,407,347	-				-0.4
3,407,347	-				-0.3
3,407,354	+				+0.6
3,407,355	-				+1.5
3,407,498	+				-0.5
3,407,499	-				+0.4
3,407,520	+				-1.2
3,407,520	+				-1.1
3,407,521	-				-0.3
3,407,521	-				-0.7
3,407,521	-				-1.4
3,407,602	-				+0.6
3,407,631	+				+0.7
3,407,631	+				-0.8
3,407,724	+				-0.5
3,407,724	+				-1.1
3,407,752	+				+0.6
3,407,752	+				+0.4
3,407,802	+				+0.8
3,407,802	+				-0.3
3,407,802	+				-0.8
3,407,815	-				-0.6
3,407,843	+				-1.2
3,407,843	+				-1.5
3,407,843	+				+0.4
3,407,844	-				-0.0
3,407,906	+		IAI47_16110	0.12	-0.4
3,407,906	+		IAI47_16110	0.12	-0.6
3,407,907	-		IAI47_16110	0.12	-0.9
3,407,943	+		IAI47_16110	0.15	-0.5
3,407,943	+		IAI47_16110	0.15	+0.4
3,407,943	+		IAI47_16110	0.15	+0.2
3,407,944	-		IAI47_16110	0.15	-0.5
3,407,944	-		IAI47_16110	0.15	+0.1
3,407,944	-		IAI47_16110	0.15	-0.9
3,407,944	-		IAI47_16110	0.15	+0.0
3,407,944	-		IAI47_16110	0.15	-0.6
3,407,948	+		IAI47_16110	0.16	-0.7
3,407,948	+		IAI47_16110	0.16	+0.5
3,407,948	+		IAI47_16110	0.16	-0.3
3,407,948	+		IAI47_16110	0.16	+0.5
3,407,948	+		IAI47_16110	0.16	-0.1
3,407,948	+		IAI47_16110	0.16	-0.0
3,407,948	+		IAI47_16110	0.16	+0.7
3,407,948	+		IAI47_16110	0.16	-0.3
3,407,948	+		IAI47_16110	0.16	+0.7
3,407,948	+		IAI47_16110	0.16	+0.1
3,407,949	-		IAI47_16110	0.16	+0.1
3,407,949	-		IAI47_16110	0.16	-0.9
3,407,949	-		IAI47_16110	0.16	-0.4
3,407,949	-		IAI47_16110	0.16	+0.1
3,407,949	-		IAI47_16110	0.16	-0.0
3,407,949	-		IAI47_16110	0.16	-0.9
3,407,949	-		IAI47_16110	0.16	+2.8
3,407,949	-		IAI47_16110	0.16	-0.4
3,407,949	-		IAI47_16110	0.16	-1.6
3,407,949	-		IAI47_16110	0.16	-0.1
3,407,949	-		IAI47_16110	0.16	-0.2
3,407,949	-		IAI47_16110	0.16	-0.5
3,407,972	+		IAI47_16110	0.18	-0.2
3,407,973	-		IAI47_16110	0.18	+0.3
3,407,994	-		IAI47_16110	0.20	+0.2
3,407,994	-		IAI47_16110	0.20	-1.1
3,408,005	+		IAI47_16110	0.21	-0.6
3,408,035	+		IAI47_16110	0.23	-0.8
3,408,035	+		IAI47_16110	0.23	-0.5
3,408,036	-		IAI47_16110	0.23	-1.4
3,408,036	-		IAI47_16110	0.23	-0.1
3,408,036	-		IAI47_16110	0.23	+0.4
3,408,039	+		IAI47_16110	0.24	+1.9
3,408,040	-		IAI47_16110	0.24	+0.6
3,408,040	-		IAI47_16110	0.24	-0.4
3,408,040	-		IAI47_16110	0.24	+0.5
3,408,040	-		IAI47_16110	0.24	-0.3
3,408,077	+		IAI47_16110	0.27	+0.4
3,408,124	+		IAI47_16110	0.31	+1.0
3,408,125	-		IAI47_16110	0.31	-0.9
3,408,137	+		IAI47_16110	0.32	+0.1
3,408,137	+		IAI47_16110	0.32	-1.2
3,408,137	+		IAI47_16110	0.32	-0.7
3,408,138	-		IAI47_16110	0.32	+0.9
3,408,138	-		IAI47_16110	0.32	+1.0
3,408,152	+		IAI47_16110	0.34	+0.0
3,408,153	-		IAI47_16110	0.34	-1.0
3,408,153	-		IAI47_16110	0.34	+0.3
3,408,153	-		IAI47_16110	0.34	-0.9
3,408,180	+		IAI47_16110	0.36	-0.4
3,408,200	+		IAI47_16110	0.38	+1.4
3,408,200	+		IAI47_16110	0.38	-0.2
3,408,200	+		IAI47_16110	0.38	-1.9
3,408,200	+		IAI47_16110	0.38	+0.8
3,408,201	-		IAI47_16110	0.38	-0.1
3,408,237	+		IAI47_16110	0.41	+0.1
3,408,237	+		IAI47_16110	0.41	-0.9
3,408,237	+		IAI47_16110	0.41	+0.2
3,408,237	+		IAI47_16110	0.41	-0.3
3,408,237	+		IAI47_16110	0.41	+0.0
3,408,237	+		IAI47_16110	0.41	-2.6
3,408,237	+		IAI47_16110	0.41	-0.1
3,408,237	+		IAI47_16110	0.41	-1.4
3,408,237	+		IAI47_16110	0.41	-0.3
3,408,237	+		IAI47_16110	0.41	+2.7
3,408,238	-		IAI47_16110	0.41	-0.4
3,408,238	-		IAI47_16110	0.41	+0.0
3,408,238	-		IAI47_16110	0.41	+1.5
3,408,238	-		IAI47_16110	0.41	+0.2
3,408,238	-		IAI47_16110	0.41	+0.4
3,408,238	-		IAI47_16110	0.41	+0.0
3,408,238	-		IAI47_16110	0.41	+1.0
3,408,238	-		IAI47_16110	0.41	+0.0
3,408,238	-		IAI47_16110	0.41	-0.1
3,408,238	-		IAI47_16110	0.41	-0.4
3,408,238	-		IAI47_16110	0.41	+0.8
3,408,242	+		IAI47_16110	0.41	+1.1
3,408,242	+		IAI47_16110	0.41	+0.5
3,408,242	+		IAI47_16110	0.41	-0.7
3,408,243	-		IAI47_16110	0.41	-0.0
3,408,277	-		IAI47_16110	0.44	-0.4
3,408,277	-		IAI47_16110	0.44	+0.9
3,408,278	+		IAI47_16110	0.45	-0.2
3,408,278	+		IAI47_16110	0.45	-1.1
3,408,278	+		IAI47_16110	0.45	+0.6
3,408,278	+		IAI47_16110	0.45	-0.1
3,408,278	+		IAI47_16110	0.45	+1.0
3,408,279	-		IAI47_16110	0.45	+1.1
3,408,279	-		IAI47_16110	0.45	+0.1
3,408,279	-		IAI47_16110	0.45	+2.0
3,408,302	+		IAI47_16110	0.47	-0.8
3,408,302	+		IAI47_16110	0.47	+0.7
3,408,303	-		IAI47_16110	0.47	-0.3
3,408,323	+		IAI47_16110	0.49	-1.0
3,408,323	+		IAI47_16110	0.49	-1.5
3,408,323	+		IAI47_16110	0.49	-0.8
3,408,323	+		IAI47_16110	0.49	+0.4
3,408,324	-		IAI47_16110	0.49	-2.7
3,408,324	-		IAI47_16110	0.49	-0.6
3,408,324	-		IAI47_16110	0.49	-0.4
3,408,324	-		IAI47_16110	0.49	-0.6
3,408,324	-		IAI47_16110	0.49	+0.3
3,408,332	+		IAI47_16110	0.49	+0.0
3,408,332	+		IAI47_16110	0.49	+0.4
3,408,332	+		IAI47_16110	0.49	+0.9
3,408,333	-		IAI47_16110	0.49	+1.0
3,408,333	-		IAI47_16110	0.49	-0.7
3,408,333	-		IAI47_16110	0.49	-1.0
3,408,336	+		IAI47_16110	0.50	+1.5
3,408,337	-		IAI47_16110	0.50	-0.4
3,408,337	-		IAI47_16110	0.50	+0.0
3,408,360	+		IAI47_16110	0.52	-0.4
3,408,360	+		IAI47_16110	0.52	+0.2
3,408,363	-		IAI47_16110	0.52	+0.9
3,408,386	+		IAI47_16110	0.54	-1.3
3,408,387	-		IAI47_16110	0.54	+0.7
3,408,398	+		IAI47_16110	0.55	-0.6
3,408,398	+		IAI47_16110	0.55	+0.9
3,408,443	+		IAI47_16110	0.59	+1.3
3,408,443	+		IAI47_16110	0.59	-0.3
3,408,454	-		IAI47_16110	0.60	+0.6
3,408,479	+		IAI47_16110	0.62	-0.3
3,408,479	+		IAI47_16110	0.62	+0.8
3,408,479	+		IAI47_16110	0.62	+1.0
3,408,479	+		IAI47_16110	0.62	-1.0
3,408,479	+		IAI47_16110	0.62	-0.2
3,408,479	+		IAI47_16110	0.62	+0.2
3,408,479	+		IAI47_16110	0.62	+0.6
3,408,480	-		IAI47_16110	0.62	-0.3
3,408,480	-		IAI47_16110	0.62	-0.9
3,408,480	-		IAI47_16110	0.62	+0.8
3,408,482	+		IAI47_16110	0.62	+0.2
3,408,482	+		IAI47_16110	0.62	-0.3
3,408,482	+		IAI47_16110	0.62	+1.9
3,408,482	+		IAI47_16110	0.62	-0.3
3,408,482	+		IAI47_16110	0.62	-1.7
3,408,483	-		IAI47_16110	0.63	-1.1
3,408,483	-		IAI47_16110	0.63	+1.0
3,408,483	-		IAI47_16110	0.63	+0.7
3,408,483	-		IAI47_16110	0.63	+0.6
3,408,483	-		IAI47_16110	0.63	-0.0
3,408,483	-		IAI47_16110	0.63	+1.3
3,408,483	-		IAI47_16110	0.63	-0.8
3,408,507	+		IAI47_16110	0.65	-0.8
3,408,507	+		IAI47_16110	0.65	-0.3
3,408,507	+		IAI47_16110	0.65	+1.3
3,408,542	+		IAI47_16110	0.68	-1.7
3,408,542	+		IAI47_16110	0.68	+0.2
3,408,542	+		IAI47_16110	0.68	-2.5
3,408,543	-		IAI47_16110	0.68	-0.7
3,408,543	-		IAI47_16110	0.68	-0.9
3,408,543	-		IAI47_16110	0.68	+0.7
3,408,543	-		IAI47_16110	0.68	+0.5
3,408,543	-		IAI47_16110	0.68	+0.9
3,408,564	+		IAI47_16110	0.70	+0.1
3,408,565	-		IAI47_16110	0.70	+1.3
3,408,581	+		IAI47_16110	0.71	+0.7
3,408,581	+		IAI47_16110	0.71	+0.5
3,408,581	+		IAI47_16110	0.71	-0.0
3,408,581	+		IAI47_16110	0.71	-0.2
3,408,616	-		IAI47_16110	0.74	-0.8
3,408,629	+		IAI47_16110	0.75	+0.1
3,408,629	+		IAI47_16110	0.75	-0.1
3,408,630	-		IAI47_16110	0.75	-0.6
3,408,632	+		IAI47_16110	0.76	+1.4
3,408,632	+		IAI47_16110	0.76	-0.6
3,408,633	-		IAI47_16110	0.76	-0.6
3,408,633	-		IAI47_16110	0.76	+0.4
3,408,662	+		IAI47_16110	0.78	-0.2
3,408,662	+		IAI47_16110	0.78	-1.5
3,408,662	+		IAI47_16110	0.78	-1.2
3,408,663	-		IAI47_16110	0.78	-0.8
3,408,663	-		IAI47_16110	0.78	-1.1
3,408,663	-		IAI47_16110	0.78	+0.5
3,408,663	-		IAI47_16110	0.78	+0.2
3,408,663	-		IAI47_16110	0.78	-0.1
3,408,663	-		IAI47_16110	0.78	+0.3
3,408,663	-		IAI47_16110	0.78	-1.9
3,408,663	-		IAI47_16110	0.78	-0.8
3,408,663	-		IAI47_16110	0.78	+0.1
3,408,665	+		IAI47_16110	0.79	-0.3
3,408,665	+		IAI47_16110	0.79	-0.4
3,408,665	+		IAI47_16110	0.79	+0.3
3,408,665	+		IAI47_16110	0.79	+0.9
3,408,665	+		IAI47_16110	0.79	-0.8
3,408,665	+		IAI47_16110	0.79	-0.0
3,408,665	+		IAI47_16110	0.79	-1.7
3,408,665	+		IAI47_16110	0.79	+1.1
3,408,666	-		IAI47_16110	0.79	-0.3
3,408,666	-		IAI47_16110	0.79	+0.2
3,408,666	-		IAI47_16110	0.79	-0.1
3,408,666	-		IAI47_16110	0.79	+1.2
3,408,666	-		IAI47_16110	0.79	-0.0
3,408,716	+		IAI47_16110	0.83	+0.6
3,408,716	+		IAI47_16110	0.83	+1.8
3,408,717	-		IAI47_16110	0.83	+1.6
3,408,717	-		IAI47_16110	0.83	+0.0
3,408,717	-		IAI47_16110	0.83	-0.1
3,408,717	-		IAI47_16110	0.83	-0.1
3,408,717	-		IAI47_16110	0.83	+0.3
3,408,777	+		IAI47_16110	0.88	+2.3
3,408,778	-		IAI47_16110	0.88	+0.7
3,408,778	-		IAI47_16110	0.88	+0.7
3,408,784	-		IAI47_16110	0.89	+0.4
3,408,824	-				+1.0
3,408,824	-				+1.6
3,408,824	-				+0.7
3,408,824	-				-0.2
3,408,861	+				+0.6
3,408,861	+				-0.2
3,408,862	-				+1.2
3,408,915	-				-0.9
3,408,915	-				+0.1
3,408,918	+				-1.8
3,408,918	+				+1.0
3,408,918	+				+0.5
3,408,918	+				+0.1
3,408,919	-				+0.1
3,408,919	-				-0.8
3,408,919	-				+1.4
3,408,928	+				+0.8
3,408,929	-				+0.0
3,408,954	+				-0.2
3,408,954	+				-0.3
3,408,954	+				+0.7
3,408,954	+				+0.6
3,408,955	-				-2.8
3,408,955	-				+0.5
3,408,955	-				-0.9
3,408,955	-				-0.5
3,408,955	-				+0.0
3,408,955	-				-1.2
3,408,955	-				-0.6
3,408,957	+				-1.7
3,408,958	-				+0.3
3,408,958	-				+0.7
3,408,958	-				+0.9
3,408,958	-				+0.1
3,408,987	+				+0.6
3,408,987	+				-0.3
3,408,987	+				+0.7
3,408,988	-				+1.2
3,408,988	-				-0.3
3,408,988	-				-0.7
3,408,988	-				+0.7
3,408,988	-				-0.4
3,408,989	+				+1.5
3,408,989	+				-1.0
3,408,990	-				-0.9
3,408,990	-				+0.1
3,408,990	-				-0.5
3,408,992	+				-0.0
3,408,993	-				-0.6
3,408,994	+				-1.4
3,408,995	-				-0.7
3,409,049	-				+0.8
3,409,049	-				+1.2
3,409,100	-				-0.5
3,409,153	+				+0.1
3,409,153	+				+0.6
3,409,153	+				-0.7
3,409,153	+				+0.8
3,409,153	+				+0.4
3,409,153	+				+1.6
3,409,153	+				+0.2
3,409,153	+				-0.8
3,409,153	+				+0.2
3,409,154	-				+0.4
3,409,154	-				+0.1
3,409,154	-				+0.8
3,409,154	-				-0.8
3,409,154	-				-0.2
3,409,154	-				-0.9
3,409,164	+				-0.0
3,409,164	+				-2.5
3,409,165	-				+1.1
3,409,165	-				-1.0
3,409,165	-				-0.8
3,409,194	-				-1.1
3,409,194	-				-1.3
3,409,194	-				-2.2
3,409,254	-				-3.0
3,409,254	-				-2.9
3,409,254	-				-0.6
3,409,254	-				-2.4
3,409,262	-				+0.9
3,409,271	+				-3.7
3,409,271	+				-3.4
3,409,271	+				-3.0
3,409,271	+				-3.1
3,409,271	+				-1.8
3,409,272	-				-1.5
3,409,272	-				-1.2
3,409,272	-				-0.8
3,409,274	-				-3.5
3,409,274	-				-2.4
3,409,275	-				-3.7
3,409,335	-				-0.5
3,409,345	+				-2.3
3,409,345	+				-1.9
3,409,345	+				-3.4
3,409,345	+				-3.6
3,409,345	+				-2.2
3,409,345	+				-2.1
3,409,345	+				-3.9
3,409,345	+				-0.9
3,409,346	-				-1.8
3,409,346	-				-3.0
3,409,346	-				-1.4
3,409,346	-				-3.7
3,409,346	-				-3.2
3,409,346	-				-2.3
3,409,346	-				-2.6
3,409,346	-				-1.9
3,409,346	-				-1.6
3,409,346	-				-3.6
3,409,346	-				-4.3
3,409,346	-				-3.8
3,409,346	-				-1.4
3,409,346	-				-2.8
3,409,346	-				-1.3
3,409,346	-				-2.8
3,409,346	-				-2.2
3,409,349	+				-0.9
3,409,349	+				-1.5
3,409,349	+				-2.0
3,409,349	+				-3.5
3,409,349	+				-2.7
3,409,349	+				-2.2
3,409,349	+				+0.4
3,409,349	+				-3.8
3,409,349	+				-2.3
3,409,349	+				-1.6
3,409,349	+				-3.9
3,409,349	+				+0.2
3,409,350	-				-1.1
3,409,350	-				-1.6
3,409,350	-				-2.5
3,409,350	-				-4.0
3,409,350	-				-3.0
3,409,350	-				-3.1
3,409,350	-				-3.2
3,409,350	-				-2.8
3,409,350	-				-2.4
3,409,350	-				-1.1
3,409,350	-				-2.4
3,409,350	-				-1.5
3,409,350	-				-3.4
3,409,350	-				-3.1
3,409,350	-				-4.0
3,409,351	+				-4.2
3,409,352	-				-2.1
3,409,352	-				-2.2
3,409,352	-				-3.4
3,409,352	-				-2.1
3,409,379	+				-3.6
3,409,421	+				-1.5
3,409,494	-		IAI47_16115	0.11	-3.3
3,409,511	+		IAI47_16115	0.11	-1.6
3,409,512	-		IAI47_16115	0.11	-2.7
3,409,512	-		IAI47_16115	0.11	-2.3
3,409,512	-		IAI47_16115	0.11	-2.1
3,409,512	-		IAI47_16115	0.11	-2.5
3,409,565	+		IAI47_16115	0.13	-0.6
3,409,565	+		IAI47_16115	0.13	-2.2
3,409,565	+		IAI47_16115	0.13	-0.9
3,409,565	+		IAI47_16115	0.13	-4.0
3,409,565	+		IAI47_16115	0.13	-3.2
3,409,566	-		IAI47_16115	0.13	-1.8
3,409,566	-		IAI47_16115	0.13	-2.8
3,409,640	+		IAI47_16115	0.15	-0.9
3,409,709	+		IAI47_16115	0.17	-2.0
3,409,709	+		IAI47_16115	0.17	-1.5
3,409,717	+		IAI47_16115	0.18	-1.6
3,409,717	+		IAI47_16115	0.18	-1.3
3,409,717	+		IAI47_16115	0.18	-2.4
3,409,717	+		IAI47_16115	0.18	-2.5
3,409,717	+		IAI47_16115	0.18	-1.3
3,409,717	+		IAI47_16115	0.18	-2.9
3,409,717	+		IAI47_16115	0.18	-1.1
3,409,717	+		IAI47_16115	0.18	-3.5
3,409,717	+		IAI47_16115	0.18	-2.3
3,409,718	-		IAI47_16115	0.18	-2.3
3,409,718	-		IAI47_16115	0.18	-2.1
3,409,718	-		IAI47_16115	0.18	-4.5
3,409,718	-		IAI47_16115	0.18	-3.7
3,409,720	+		IAI47_16115	0.18	-1.3
3,409,720	+		IAI47_16115	0.18	-3.9
3,409,720	+		IAI47_16115	0.18	-1.9
3,409,720	+		IAI47_16115	0.18	-2.5
3,409,803	+		IAI47_16115	0.20	-2.8
3,409,803	+		IAI47_16115	0.20	-2.7
3,409,817	+		IAI47_16115	0.21	-1.4
3,409,818	-		IAI47_16115	0.21	-2.5
3,409,818	-		IAI47_16115	0.21	-2.2
3,409,836	-		IAI47_16115	0.21	-1.7
3,409,867	+		IAI47_16115	0.22	-2.6