Strain Fitness in Pantoea sp. MT58 around IAI47_10320

Experiment: Nickel (II) chloride 40 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 40 uM, aerobic
2,183,237	+				+0.3
2,183,283	+				+0.5
2,183,283	+				+1.0
2,183,283	+				-0.1
2,183,283	+				+0.2
2,183,283	+				-0.5
2,183,284	-				+0.9
2,183,284	-				-0.0
2,183,284	-				-1.2
2,183,284	-				-0.7
2,183,284	-				+1.3
2,183,284	-				-0.2
2,183,284	-				-0.1
2,183,284	-				-1.0
2,183,284	-				-0.2
2,183,284	-				-0.3
2,183,344	-				-0.7
2,183,344	-				+0.1
2,183,344	-				-0.2
2,183,344	-				+1.9
2,183,344	-				-2.0
2,183,357	+				+0.7
2,183,358	-				-0.5
2,183,444	-				-0.2
2,183,469	+		IAI47_10315	0.11	-1.2
2,183,470	-		IAI47_10315	0.11	-0.2
2,183,576	+		IAI47_10315	0.41	-1.0
2,183,577	-		IAI47_10315	0.41	+1.8
2,183,577	-		IAI47_10315	0.41	+0.6
2,183,654	-		IAI47_10315	0.62	-1.0
2,183,654	-		IAI47_10315	0.62	+0.7
2,183,654	-		IAI47_10315	0.62	+0.4
2,183,678	+		IAI47_10315	0.69	+2.1
2,183,679	-		IAI47_10315	0.69	+0.6
2,183,694	+		IAI47_10315	0.74	+0.3
2,183,712	+		IAI47_10315	0.79	-0.4
2,183,712	+		IAI47_10315	0.79	+0.4
2,183,712	+		IAI47_10315	0.79	+0.2
2,183,712	+		IAI47_10315	0.79	+0.7
2,183,712	+		IAI47_10315	0.79	-0.9
2,183,712	+		IAI47_10315	0.79	-0.6
2,183,712	+		IAI47_10315	0.79	-0.1
2,183,712	+		IAI47_10315	0.79	-0.5
2,183,712	+		IAI47_10315	0.79	-1.0
2,183,713	-		IAI47_10315	0.79	-2.2
2,183,713	-		IAI47_10315	0.79	+0.2
2,183,713	-		IAI47_10315	0.79	+0.5
2,183,713	-		IAI47_10315	0.79	-0.1
2,183,713	-		IAI47_10315	0.79	-0.5
2,183,729	+		IAI47_10315	0.83	+0.5
2,183,729	+		IAI47_10315	0.83	-0.8
2,183,729	+		IAI47_10315	0.83	+0.2
2,183,729	+		IAI47_10315	0.83	-0.1
2,183,729	+		IAI47_10315	0.83	+0.8
2,183,729	+		IAI47_10315	0.83	+0.4
2,183,729	+		IAI47_10315	0.83	+0.7
2,183,729	+		IAI47_10315	0.83	-1.8
2,183,729	+		IAI47_10315	0.83	+0.5
2,183,729	+		IAI47_10315	0.83	-0.4
2,183,729	+		IAI47_10315	0.83	-1.2
2,183,729	+		IAI47_10315	0.83	+0.8
2,183,729	+		IAI47_10315	0.83	-0.4
2,183,729	+		IAI47_10315	0.83	+0.4
2,183,730	-		IAI47_10315	0.84	+0.0
2,183,730	-		IAI47_10315	0.84	+0.8
2,183,730	-		IAI47_10315	0.84	-0.2
2,183,730	-		IAI47_10315	0.84	-0.6
2,183,730	-		IAI47_10315	0.84	+1.1
2,183,730	-		IAI47_10315	0.84	+0.5
2,183,730	-		IAI47_10315	0.84	-0.5
2,183,730	-		IAI47_10315	0.84	-0.2
2,183,781	+				-2.5
2,183,782	-				+0.0
2,183,782	-				+0.7
2,183,782	-				-0.4
2,183,782	-				-0.4
2,183,782	-				-0.4
2,183,787	+				-0.7
2,183,803	+				-0.4
2,183,803	+				+0.0
2,183,804	-				-0.4
2,183,804	-				-1.5
2,183,828	-				-0.2
2,183,930	-				+0.4
2,183,930	-				-0.8
2,183,954	+				+1.7
2,183,954	+				-1.8
2,183,955	-				-0.0
2,183,955	-				-2.2
2,184,018	-				-0.4
2,184,018	-				-0.3
2,184,037	+				-0.6
2,184,038	-				+1.2
2,184,102	+				-1.9
2,184,102	+				+0.1
2,184,209	+				-1.0
2,184,283	-		IAI47_10320	0.15	-1.4
2,184,468	-		IAI47_10320	0.52	+0.0
2,184,734	-				+0.4
2,184,734	-				-0.6
2,184,734	-				+1.0
2,184,734	-				-0.6
2,184,734	-				+0.2
2,184,742	-				-0.0
2,184,742	-				-0.5
2,184,752	-				+0.2
2,184,778	-				+0.5
2,184,828	+				+0.7
2,184,828	+				+0.5
2,184,828	+				+1.5
2,184,828	+				+0.4
2,184,828	+				-1.2
2,184,828	+				-2.6
2,184,828	+				-0.3
2,184,829	-				+0.0
2,184,829	-				+0.8
2,184,829	-				+0.5
2,184,829	-				+0.5
2,184,853	-				+0.2
2,184,901	+				+0.6
2,184,960	+				-1.3
2,184,961	-				+0.2
2,184,967	+				-3.0
2,184,985	+				+0.3
2,184,985	+				-0.6
2,184,985	+				-0.1
2,184,985	+				+0.8
2,184,985	+				+0.7
2,184,986	-				+0.5
2,185,038	-		IAI47_10325	0.11	+0.0
2,185,038	-		IAI47_10325	0.11	+0.2
2,185,038	-		IAI47_10325	0.11	-0.3
2,185,038	-		IAI47_10325	0.11	+1.9
2,185,072	+		IAI47_10325	0.14	+0.4
2,185,109	+		IAI47_10325	0.17	-0.0
2,185,162	+		IAI47_10325	0.21	+1.2
2,185,163	-		IAI47_10325	0.21	-0.5
2,185,163	-		IAI47_10325	0.21	-0.5
2,185,163	-		IAI47_10325	0.21	-0.6
2,185,163	-		IAI47_10325	0.21	+0.4
2,185,163	-		IAI47_10325	0.21	+0.2
2,185,181	+		IAI47_10325	0.23	+3.2
2,185,181	+		IAI47_10325	0.23	-0.0
2,185,181	+		IAI47_10325	0.23	-0.5
2,185,181	+		IAI47_10325	0.23	+0.3
2,185,182	-		IAI47_10325	0.23	+0.2
2,185,182	-		IAI47_10325	0.23	-1.1
2,185,182	-		IAI47_10325	0.23	+0.6
2,185,198	+		IAI47_10325	0.24	-0.2
2,185,198	+		IAI47_10325	0.24	+0.9
2,185,290	+		IAI47_10325	0.32	+0.3
2,185,291	-		IAI47_10325	0.32	+0.6
2,185,291	-		IAI47_10325	0.32	-0.6
2,185,368	+		IAI47_10325	0.39	+0.4
2,185,369	-		IAI47_10325	0.39	+0.4
2,185,369	-		IAI47_10325	0.39	-0.2
2,185,369	-		IAI47_10325	0.39	-1.3
2,185,549	-		IAI47_10325	0.54	-0.6
2,185,550	+		IAI47_10325	0.54	+0.3
2,185,550	+		IAI47_10325	0.54	-0.3
2,185,550	+		IAI47_10325	0.54	-0.4
2,185,550	+		IAI47_10325	0.54	-0.3
2,185,550	+		IAI47_10325	0.54	+0.2
2,185,551	-		IAI47_10325	0.54	-1.0
2,185,551	-		IAI47_10325	0.54	-1.4
2,185,551	-		IAI47_10325	0.54	-2.2
2,185,551	-		IAI47_10325	0.54	-0.6
2,185,551	-		IAI47_10325	0.54	+0.7
2,185,551	-		IAI47_10325	0.54	-0.5
2,185,587	+		IAI47_10325	0.57	+1.5
2,185,588	-		IAI47_10325	0.57	-0.1
2,185,624	+		IAI47_10325	0.60	+0.9
2,185,625	-		IAI47_10325	0.60	+0.3
2,185,625	-		IAI47_10325	0.60	-1.7
2,185,677	+		IAI47_10325	0.65	+0.6
2,185,677	+		IAI47_10325	0.65	+0.4
2,185,677	+		IAI47_10325	0.65	+0.5
2,185,677	+		IAI47_10325	0.65	+0.2
2,185,677	+		IAI47_10325	0.65	-0.1
2,185,678	-		IAI47_10325	0.65	+0.2
2,185,678	-		IAI47_10325	0.65	-0.4
2,185,678	-		IAI47_10325	0.65	+0.2
2,185,678	-		IAI47_10325	0.65	+1.5
2,185,678	-		IAI47_10325	0.65	-0.2