Strain Fitness in Pantoea sp. MT58 around IAI47_04845

Experiment: Nickel (II) chloride 40 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 40 uM, aerobic
1,015,235	+				+0.2
1,015,236	-				+0.3
1,015,236	-				-0.8
1,015,236	-				-0.4
1,015,274	+				-0.4
1,015,275	-				-1.6
1,015,275	-				-0.4
1,015,287	+				+0.1
1,015,288	-				-1.1
1,015,288	-				-1.1
1,015,310	-				+0.4
1,015,310	-				-0.4
1,015,310	-				-0.6
1,015,311	+				+1.7
1,015,312	-				+1.7
1,015,312	-				+0.2
1,015,340	+				-0.3
1,015,341	-				-1.0
1,015,399	+				+0.9
1,015,399	+				-0.3
1,015,399	+				-0.5
1,015,399	+				+0.5
1,015,400	-				-1.2
1,015,400	-				-0.3
1,015,438	+				+0.3
1,015,439	-				-0.3
1,015,439	-				-0.4
1,015,439	-				-0.8
1,015,439	-				-0.6
1,015,458	+				+0.2
1,015,459	-				+0.2
1,015,459	-				-1.5
1,015,481	+				-2.1
1,015,497	+				-0.3
1,015,497	+				+0.1
1,015,497	+				+0.1
1,015,497	+				+0.1
1,015,498	-				+1.1
1,015,498	-				-0.3
1,015,498	-				-0.6
1,015,503	+				+0.5
1,015,630	-		IAI47_04840	0.24	+0.9
1,015,750	-		IAI47_04840	0.40	+0.8
1,015,750	-		IAI47_04840	0.40	+0.8
1,015,750	-		IAI47_04840	0.40	+0.6
1,015,750	-		IAI47_04840	0.40	-1.5
1,015,797	+		IAI47_04840	0.47	-0.5
1,015,798	-		IAI47_04840	0.47	-1.0
1,015,805	-		IAI47_04840	0.48	-1.1
1,015,805	-		IAI47_04840	0.48	+0.3
1,015,812	+		IAI47_04840	0.49	+0.6
1,015,832	-		IAI47_04840	0.51	-1.8
1,015,857	+		IAI47_04840	0.55	-1.2
1,015,858	-		IAI47_04840	0.55	-0.6
1,015,913	+		IAI47_04840	0.62	-0.7
1,015,913	+		IAI47_04840	0.62	+0.2
1,015,913	+		IAI47_04840	0.62	-0.2
1,015,913	+		IAI47_04840	0.62	-0.0
1,015,913	+		IAI47_04840	0.62	+0.8
1,015,913	+		IAI47_04840	0.62	+1.9
1,015,914	-		IAI47_04840	0.62	-1.1
1,015,914	-		IAI47_04840	0.62	+0.7
1,015,914	-		IAI47_04840	0.62	+0.4
1,015,914	-		IAI47_04840	0.62	-1.0
1,015,914	-		IAI47_04840	0.62	-0.2
1,016,002	-		IAI47_04840	0.74	-1.6
1,016,002	-		IAI47_04840	0.74	-0.8
1,016,047	+		IAI47_04840	0.80	+0.9
1,016,047	+		IAI47_04840	0.80	-1.9
1,016,048	-		IAI47_04840	0.80	+1.2
1,016,048	-		IAI47_04840	0.80	-0.3
1,016,048	-		IAI47_04840	0.80	-1.4
1,016,108	+		IAI47_04840	0.88	+0.3
1,016,109	-		IAI47_04840	0.88	+1.2
1,016,109	-		IAI47_04840	0.88	-0.5
1,016,146	+				+0.6
1,016,182	+				+0.6
1,016,183	-				-0.8
1,016,183	-				-0.4
1,016,183	-				+0.1
1,016,183	-				-1.8
1,016,183	-				+1.1
1,016,183	-				-0.4
1,016,194	+				+0.3
1,016,195	-				+0.3
1,016,195	-				+0.2
1,016,236	-				-1.4
1,016,298	+				-0.8
1,016,298	+				-1.8
1,016,298	+				-0.0
1,016,299	-				-0.5
1,016,299	-				+0.1
1,016,299	-				-0.0
1,016,345	+		IAI47_04845	0.10	-1.3
1,016,346	-		IAI47_04845	0.10	-1.7
1,016,346	-		IAI47_04845	0.10	-0.3
1,016,346	-		IAI47_04845	0.10	-0.3
1,016,368	+		IAI47_04845	0.12	-2.4
1,016,369	-		IAI47_04845	0.12	-1.9
1,016,371	+		IAI47_04845	0.12	-1.7
1,016,371	+		IAI47_04845	0.12	+1.6
1,016,371	+		IAI47_04845	0.12	-1.4
1,016,371	+		IAI47_04845	0.12	-2.0
1,016,371	+		IAI47_04845	0.12	-0.4
1,016,372	-		IAI47_04845	0.12	-1.5
1,016,372	-		IAI47_04845	0.12	-1.4
1,016,372	-		IAI47_04845	0.12	-1.6
1,016,372	-		IAI47_04845	0.12	-1.4
1,016,372	-		IAI47_04845	0.12	-1.6
1,016,399	+		IAI47_04845	0.13	-2.2
1,016,444	+		IAI47_04845	0.16	-0.0
1,016,445	-		IAI47_04845	0.16	-2.5
1,016,445	-		IAI47_04845	0.16	-3.1
1,016,452	+		IAI47_04845	0.17	-0.6
1,016,452	+		IAI47_04845	0.17	-2.4
1,016,453	-		IAI47_04845	0.17	-1.8
1,016,453	-		IAI47_04845	0.17	-0.0
1,016,453	-		IAI47_04845	0.17	-0.4
1,016,453	-		IAI47_04845	0.17	-2.1
1,016,453	-		IAI47_04845	0.17	-1.3
1,016,453	-		IAI47_04845	0.17	-0.4
1,016,453	-		IAI47_04845	0.17	-1.3
1,016,462	+		IAI47_04845	0.17	-0.7
1,016,462	+		IAI47_04845	0.17	-2.2
1,016,463	-		IAI47_04845	0.17	+0.1
1,016,463	-		IAI47_04845	0.17	-1.9
1,016,467	-		IAI47_04845	0.18	-0.7
1,016,467	-		IAI47_04845	0.18	+0.9
1,016,467	-		IAI47_04845	0.18	-2.4
1,016,486	+		IAI47_04845	0.19	-1.6
1,016,486	+		IAI47_04845	0.19	-0.4
1,016,486	+		IAI47_04845	0.19	+0.3
1,016,486	+		IAI47_04845	0.19	-1.3
1,016,487	-		IAI47_04845	0.19	-1.3
1,016,487	-		IAI47_04845	0.19	-0.4
1,016,497	-		IAI47_04845	0.20	-0.2
1,016,608	+		IAI47_04845	0.26	-0.5
1,016,608	+		IAI47_04845	0.26	+0.7
1,016,608	+		IAI47_04845	0.26	-1.7
1,016,609	-		IAI47_04845	0.26	-0.1
1,016,609	-		IAI47_04845	0.26	+0.4
1,016,668	+		IAI47_04845	0.30	-0.5
1,016,668	+		IAI47_04845	0.30	-1.4
1,016,668	+		IAI47_04845	0.30	+1.2
1,016,669	-		IAI47_04845	0.30	+1.6
1,016,669	-		IAI47_04845	0.30	-1.1
1,016,669	-		IAI47_04845	0.30	-0.7
1,016,669	-		IAI47_04845	0.30	-1.5
1,016,689	+		IAI47_04845	0.31	+0.7
1,016,689	+		IAI47_04845	0.31	-0.9
1,016,689	+		IAI47_04845	0.31	-1.5
1,016,689	+		IAI47_04845	0.31	-0.8
1,016,689	+		IAI47_04845	0.31	-0.5
1,016,689	+		IAI47_04845	0.31	-1.6
1,016,689	+		IAI47_04845	0.31	-0.8
1,016,690	-		IAI47_04845	0.31	-1.9
1,016,690	-		IAI47_04845	0.31	-1.4
1,016,690	-		IAI47_04845	0.31	-1.1
1,016,690	-		IAI47_04845	0.31	-0.8
1,016,746	+		IAI47_04845	0.35	-1.7
1,016,746	+		IAI47_04845	0.35	-0.2
1,016,746	+		IAI47_04845	0.35	-2.2
1,016,746	+		IAI47_04845	0.35	-3.2
1,016,746	+		IAI47_04845	0.35	-1.2
1,016,746	+		IAI47_04845	0.35	-0.8
1,016,746	+		IAI47_04845	0.35	-0.1
1,016,747	-		IAI47_04845	0.35	-0.7
1,016,747	-		IAI47_04845	0.35	+1.9
1,016,747	-		IAI47_04845	0.35	-0.7
1,016,747	-		IAI47_04845	0.35	-1.4
1,016,747	-		IAI47_04845	0.35	-1.7
1,016,747	-		IAI47_04845	0.35	-0.7
1,016,747	-		IAI47_04845	0.35	-0.9
1,016,747	-		IAI47_04845	0.35	-1.1
1,016,815	+		IAI47_04845	0.39	-1.6
1,016,815	+		IAI47_04845	0.39	-0.7
1,016,816	-		IAI47_04845	0.39	-0.1
1,016,816	-		IAI47_04845	0.39	-2.7
1,016,816	-		IAI47_04845	0.39	-0.6
1,016,816	-		IAI47_04845	0.39	-1.4
1,016,872	+		IAI47_04845	0.43	+0.7
1,016,872	+		IAI47_04845	0.43	-0.6
1,016,872	+		IAI47_04845	0.43	-0.6
1,016,872	+		IAI47_04845	0.43	-1.0
1,016,872	+		IAI47_04845	0.43	-1.1
1,016,872	+		IAI47_04845	0.43	-0.7
1,016,872	+		IAI47_04845	0.43	-1.4
1,016,872	+		IAI47_04845	0.43	-0.3
1,016,872	+		IAI47_04845	0.43	-1.3
1,016,872	+		IAI47_04845	0.43	-1.3
1,016,873	-		IAI47_04845	0.43	-1.2
1,016,873	-		IAI47_04845	0.43	-1.1
1,016,873	-		IAI47_04845	0.43	+0.2
1,016,873	-		IAI47_04845	0.43	-1.1
1,016,876	+		IAI47_04845	0.43	+0.6
1,016,876	+		IAI47_04845	0.43	-0.5
1,016,876	+		IAI47_04845	0.43	-0.3
1,016,876	+		IAI47_04845	0.43	-2.1
1,016,876	+		IAI47_04845	0.43	-0.0
1,016,876	+		IAI47_04845	0.43	-0.8
1,016,876	+		IAI47_04845	0.43	-1.1
1,016,876	+		IAI47_04845	0.43	-1.1
1,016,876	+		IAI47_04845	0.43	-0.7
1,016,876	+		IAI47_04845	0.43	-0.9
1,016,876	+		IAI47_04845	0.43	-0.7
1,016,876	+		IAI47_04845	0.43	-2.1
1,016,876	+		IAI47_04845	0.43	+0.3
1,016,876	+		IAI47_04845	0.43	-0.9
1,016,876	+		IAI47_04845	0.43	-2.0
1,016,876	+		IAI47_04845	0.43	-1.8
1,016,876	+		IAI47_04845	0.43	-0.8
1,016,876	+		IAI47_04845	0.43	-0.3
1,016,876	+		IAI47_04845	0.43	-1.1
1,016,877	-		IAI47_04845	0.43	-0.6
1,016,877	-		IAI47_04845	0.43	-1.5
1,016,877	-		IAI47_04845	0.43	-1.3
1,016,877	-		IAI47_04845	0.43	-1.4
1,016,877	-		IAI47_04845	0.43	-0.8
1,016,877	-		IAI47_04845	0.43	-1.8
1,016,877	-		IAI47_04845	0.43	-2.2
1,016,877	-		IAI47_04845	0.43	-0.1
1,016,877	-		IAI47_04845	0.43	-0.5
1,016,877	-		IAI47_04845	0.43	+1.7
1,016,877	-		IAI47_04845	0.43	-0.8
1,016,877	-		IAI47_04845	0.43	-0.3
1,016,877	-		IAI47_04845	0.43	-1.8
1,016,877	-		IAI47_04845	0.43	-2.5
1,016,877	-		IAI47_04845	0.43	-2.2
1,016,877	-		IAI47_04845	0.43	+1.0
1,016,877	-		IAI47_04845	0.43	-0.8
1,016,877	-		IAI47_04845	0.43	-0.6
1,016,877	-		IAI47_04845	0.43	+0.1
1,016,877	-		IAI47_04845	0.43	-0.9
1,017,015	+		IAI47_04845	0.51	-1.1
1,017,027	+		IAI47_04845	0.52	+0.5
1,017,163	+		IAI47_04845	0.61	+1.0
1,017,163	+		IAI47_04845	0.61	-1.0
1,017,163	+		IAI47_04845	0.61	-1.7
1,017,163	+		IAI47_04845	0.61	-0.4
1,017,163	+		IAI47_04845	0.61	-1.1
1,017,163	+		IAI47_04845	0.61	-0.3
1,017,164	-		IAI47_04845	0.61	-1.1
1,017,164	-		IAI47_04845	0.61	-2.2
1,017,164	-		IAI47_04845	0.61	-1.9
1,017,169	+		IAI47_04845	0.61	-0.8
1,017,170	-		IAI47_04845	0.61	-0.3
1,017,170	-		IAI47_04845	0.61	-1.4
1,017,170	-		IAI47_04845	0.61	-1.0
1,017,170	-		IAI47_04845	0.61	-2.0
1,017,240	-		IAI47_04845	0.65	-1.2
1,017,293	+		IAI47_04845	0.69	-2.2
1,017,294	-		IAI47_04845	0.69	-1.1
1,017,323	+		IAI47_04845	0.70	-0.8
1,017,323	+		IAI47_04845	0.70	-0.6
1,017,324	-		IAI47_04845	0.71	+0.1
1,017,324	-		IAI47_04845	0.71	-0.8
1,017,341	+		IAI47_04845	0.72	+0.4
1,017,342	-		IAI47_04845	0.72	-1.0
1,017,455	-		IAI47_04845	0.79	-1.4
1,017,455	-		IAI47_04845	0.79	+0.6
1,017,519	+		IAI47_04845	0.83	-1.9
1,017,519	+		IAI47_04845	0.83	-2.3
1,017,520	-		IAI47_04845	0.83	+1.2
1,017,520	-		IAI47_04845	0.83	-0.8
1,017,520	-		IAI47_04845	0.83	+1.6
1,017,536	+		IAI47_04845	0.84	-1.1
1,017,537	-		IAI47_04845	0.84	-2.1
1,017,545	+		IAI47_04845	0.84	-0.5
1,017,570	+		IAI47_04845	0.86	-1.5
1,017,571	-		IAI47_04845	0.86	-0.9
1,017,571	-		IAI47_04845	0.86	-1.4
1,017,593	+		IAI47_04845	0.87	-0.6
1,017,593	+		IAI47_04845	0.87	+0.2
1,017,593	+		IAI47_04845	0.87	-2.9
1,017,593	+		IAI47_04845	0.87	-0.4
1,017,593	+		IAI47_04845	0.87	-0.4
1,017,594	-		IAI47_04845	0.87	-0.4
1,017,594	-		IAI47_04845	0.87	-1.6
1,017,594	-		IAI47_04845	0.87	-1.3
1,017,594	-		IAI47_04845	0.87	-3.0
1,017,617	+		IAI47_04845	0.89	-2.8
1,017,618	-		IAI47_04845	0.89	-1.9
1,017,618	-		IAI47_04845	0.89	-1.8
1,017,644	+				+0.4
1,017,645	-				-1.5
1,017,658	+				-0.5
1,017,658	+				-0.7
1,017,658	+				+0.6
1,017,659	-				-0.6
1,017,659	-				-1.5
1,017,659	-				+0.1
1,017,689	+				-2.3
1,017,689	+				-1.4
1,017,690	-				-0.9
1,017,697	-				-1.4
1,017,697	-				+0.9
1,017,697	-				-1.1
1,017,765	+				-1.2
1,017,765	+				+0.5
1,017,765	+				+0.4
1,017,766	-				+1.7
1,017,766	-				+0.3
1,017,766	-				-0.5
1,017,766	-				+0.1
1,017,766	-				-1.4
1,017,766	-				-0.3
1,017,766	-				-1.1
1,017,768	+				-0.7
1,017,769	-				-0.3
1,017,769	-				-0.9
1,017,769	-				-1.0
1,017,769	-				-2.0
1,017,769	-				+0.3
1,017,781	+				-0.5
1,017,782	-				-0.4
1,017,782	-				-0.0
1,017,841	-				-0.9
1,017,888	+				+0.9
1,017,913	+				-0.0
1,017,914	-				-0.2
1,017,917	+				+0.3
1,017,918	-				-0.2
1,017,918	-				-2.1
1,017,961	+				+0.3
1,017,972	+				+0.2
1,017,982	-				+0.8
1,017,990	+				-0.2
1,017,990	+				+0.7
1,017,991	-				+0.1
1,018,013	+				+0.5
1,018,013	+				-1.0
1,018,013	+				-0.2
1,018,013	+				+0.6
1,018,013	+				+0.3
1,018,018	+				-1.3
1,018,018	+				-0.4
1,018,034	+				-0.3
1,018,034	+				+0.5
1,018,071	+				-2.0
1,018,071	+				-0.7
1,018,071	+				+0.8
1,018,071	+				+1.6
1,018,089	+				-0.8
1,018,093	+				-0.5
1,018,093	+				-0.5
1,018,093	+				-0.3
1,018,093	+				+0.8
1,018,133	+				+0.1
1,018,133	+				+1.0
1,018,133	+				-0.2
1,018,173	+				-0.4
1,018,173	+				+1.1
1,018,173	+				+0.2
1,018,758	+				+2.6
1,018,786	+				+0.9
1,018,792	+				-0.7