Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04305 and AO353_04310 are separated by 484 nucleotides AO353_04310 and AO353_04315 are separated by 186 nucleotides
AO353_04305: AO353_04305 - hypothetical protein, at 927,147 to 927,332
_04305
AO353_04310: AO353_04310 - glucan biosynthesis protein D, at 927,817 to 929,451
_04310
AO353_04315: AO353_04315 - oxidoreductase, at 929,638 to 930,744
_04315
Position (kb) 927
928
929
930 Strain fitness (log2 ratio) -2
-1
0
1
2 at 926.838 kb on + strand at 926.838 kb on + strand at 926.838 kb on + strand at 926.838 kb on + strand at 926.838 kb on + strand at 926.838 kb on + strand at 926.838 kb on + strand at 926.838 kb on + strand at 926.839 kb on - strand at 926.839 kb on - strand at 926.839 kb on - strand at 926.839 kb on - strand at 926.839 kb on - strand at 926.839 kb on - strand at 926.953 kb on + strand at 926.953 kb on + strand at 926.953 kb on + strand at 926.953 kb on + strand at 926.953 kb on + strand at 926.953 kb on + strand at 926.954 kb on - strand at 926.954 kb on - strand at 926.954 kb on - strand at 926.954 kb on - strand at 926.954 kb on - strand at 926.954 kb on - strand at 927.004 kb on + strand at 927.005 kb on - strand at 927.031 kb on + strand at 927.031 kb on + strand at 927.053 kb on + strand at 927.053 kb on + strand at 927.054 kb on - strand at 927.184 kb on + strand, within AO353_04305 at 927.370 kb on + strand at 927.370 kb on + strand at 927.370 kb on + strand at 927.370 kb on + strand at 927.371 kb on - strand at 927.371 kb on - strand at 927.371 kb on - strand at 927.371 kb on - strand at 927.371 kb on - strand at 927.371 kb on - strand at 927.371 kb on - strand at 927.371 kb on - strand at 927.371 kb on - strand at 927.371 kb on - strand at 927.467 kb on + strand at 927.467 kb on + strand at 927.468 kb on - strand at 927.473 kb on + strand at 927.474 kb on - strand at 927.505 kb on - strand at 927.510 kb on - strand at 927.510 kb on - strand at 927.510 kb on - strand at 927.514 kb on - strand at 927.514 kb on - strand at 927.521 kb on + strand at 927.536 kb on - strand at 927.536 kb on - strand at 927.536 kb on - strand at 927.536 kb on - strand at 927.536 kb on - strand at 927.572 kb on + strand at 927.573 kb on - strand at 927.593 kb on + strand at 927.593 kb on + strand at 927.593 kb on + strand at 927.594 kb on - strand at 927.594 kb on - strand at 927.594 kb on - strand at 927.619 kb on + strand at 927.619 kb on + strand at 927.619 kb on + strand at 927.620 kb on - strand at 927.620 kb on - strand at 927.620 kb on - strand at 927.669 kb on + strand at 927.669 kb on + strand at 927.669 kb on + strand at 927.670 kb on - strand at 927.670 kb on - strand at 927.684 kb on + strand at 927.685 kb on - strand at 927.685 kb on - strand at 927.699 kb on - strand at 927.699 kb on - strand at 927.699 kb on - strand at 927.703 kb on + strand at 927.703 kb on + strand at 927.703 kb on + strand at 927.704 kb on - strand at 927.704 kb on - strand at 927.704 kb on - strand at 927.718 kb on + strand at 927.718 kb on + strand at 927.719 kb on - strand at 927.719 kb on - strand at 927.816 kb on + strand at 927.817 kb on - strand at 927.817 kb on - strand at 927.863 kb on - strand at 927.988 kb on + strand, within AO353_04310 at 927.989 kb on - strand, within AO353_04310 at 928.060 kb on + strand, within AO353_04310 at 928.156 kb on + strand, within AO353_04310 at 928.156 kb on + strand, within AO353_04310 at 928.156 kb on + strand, within AO353_04310 at 928.157 kb on - strand, within AO353_04310 at 928.157 kb on - strand, within AO353_04310 at 928.157 kb on - strand, within AO353_04310 at 928.157 kb on - strand, within AO353_04310 at 928.157 kb on - strand, within AO353_04310 at 928.219 kb on + strand, within AO353_04310 at 928.219 kb on + strand, within AO353_04310 at 928.219 kb on + strand, within AO353_04310 at 928.220 kb on - strand, within AO353_04310 at 928.220 kb on - strand, within AO353_04310 at 928.220 kb on - strand, within AO353_04310 at 928.220 kb on - strand, within AO353_04310 at 928.220 kb on - strand, within AO353_04310 at 928.220 kb on - strand, within AO353_04310 at 928.339 kb on + strand, within AO353_04310 at 928.339 kb on + strand, within AO353_04310 at 928.339 kb on + strand, within AO353_04310 at 928.339 kb on + strand, within AO353_04310 at 928.340 kb on - strand, within AO353_04310 at 928.340 kb on - strand, within AO353_04310 at 928.370 kb on - strand, within AO353_04310 at 928.405 kb on + strand, within AO353_04310 at 928.406 kb on - strand, within AO353_04310 at 928.406 kb on - strand, within AO353_04310 at 928.489 kb on + strand, within AO353_04310 at 928.489 kb on + strand, within AO353_04310 at 928.489 kb on + strand, within AO353_04310 at 928.489 kb on + strand, within AO353_04310 at 928.489 kb on + strand, within AO353_04310 at 928.490 kb on - strand, within AO353_04310 at 928.490 kb on - strand, within AO353_04310 at 928.490 kb on - strand, within AO353_04310 at 928.526 kb on - strand, within AO353_04310 at 928.840 kb on + strand, within AO353_04310 at 928.840 kb on + strand, within AO353_04310 at 928.840 kb on + strand, within AO353_04310 at 928.840 kb on + strand, within AO353_04310 at 928.840 kb on + strand, within AO353_04310 at 928.840 kb on + strand, within AO353_04310 at 928.840 kb on + strand, within AO353_04310 at 928.841 kb on - strand, within AO353_04310 at 928.841 kb on - strand, within AO353_04310 at 928.841 kb on - strand, within AO353_04310 at 928.841 kb on - strand, within AO353_04310 at 928.861 kb on + strand, within AO353_04310 at 928.862 kb on - strand, within AO353_04310 at 929.017 kb on + strand, within AO353_04310 at 929.017 kb on + strand, within AO353_04310 at 929.017 kb on + strand, within AO353_04310 at 929.024 kb on - strand, within AO353_04310 at 929.033 kb on - strand, within AO353_04310 at 929.033 kb on - strand, within AO353_04310 at 929.392 kb on + strand at 929.393 kb on - strand at 929.393 kb on - strand at 929.393 kb on - strand at 929.393 kb on - strand at 929.398 kb on + strand at 929.399 kb on - strand at 929.399 kb on - strand at 929.399 kb on - strand at 929.399 kb on - strand at 929.399 kb on - strand at 929.399 kb on - strand at 929.399 kb on - strand at 929.428 kb on + strand at 929.449 kb on + strand at 929.449 kb on + strand at 929.449 kb on + strand at 929.450 kb on - strand at 929.450 kb on - strand at 929.450 kb on - strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.454 kb on + strand at 929.455 kb on - strand at 929.455 kb on - strand at 929.455 kb on - strand at 929.455 kb on - strand at 929.455 kb on - strand at 929.455 kb on - strand at 929.455 kb on - strand at 929.455 kb on - strand at 929.455 kb on - strand at 929.455 kb on - strand at 929.498 kb on + strand at 929.498 kb on + strand at 929.507 kb on + strand at 929.508 kb on - strand at 929.508 kb on - strand at 929.532 kb on - strand at 929.532 kb on - strand at 929.693 kb on + strand at 929.693 kb on + strand at 929.753 kb on + strand, within AO353_04315 at 930.004 kb on + strand, within AO353_04315 at 930.004 kb on + strand, within AO353_04315 at 930.004 kb on + strand, within AO353_04315 at 930.200 kb on + strand, within AO353_04315 at 930.201 kb on - strand, within AO353_04315
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 926,838 + +0.3 926,838 + +0.3 926,838 + -0.6 926,838 + +0.5 926,838 + +0.4 926,838 + -1.0 926,838 + -0.3 926,838 + -1.5 926,839 - +0.5 926,839 - +0.7 926,839 - +1.3 926,839 - +0.1 926,839 - -0.3 926,839 - +0.7 926,953 + -0.4 926,953 + +0.4 926,953 + +0.3 926,953 + -1.8 926,953 + -1.5 926,953 + +0.1 926,954 - -1.8 926,954 - -0.6 926,954 - +0.4 926,954 - -1.7 926,954 - -0.4 926,954 - +2.3 927,004 + -0.9 927,005 - +0.7 927,031 + -1.9 927,031 + +1.0 927,053 + -0.3 927,053 + +0.3 927,054 - +0.7 927,184 + AO353_04305 0.20 -0.3 927,370 + +1.1 927,370 + +1.7 927,370 + -1.1 927,370 + -0.9 927,371 - -0.1 927,371 - -1.4 927,371 - -1.1 927,371 - +0.0 927,371 - -0.3 927,371 - -1.3 927,371 - +0.3 927,371 - -0.5 927,371 - -0.4 927,371 - -1.1 927,467 + +2.3 927,467 + +0.3 927,468 - +0.7 927,473 + +0.1 927,474 - -0.8 927,505 - +0.1 927,510 - -0.2 927,510 - +2.1 927,510 - +0.5 927,514 - +0.3 927,514 - +0.1 927,521 + -1.4 927,536 - +0.8 927,536 - -0.7 927,536 - -1.5 927,536 - -0.4 927,536 - +0.6 927,572 + -0.9 927,573 - +0.7 927,593 + +0.1 927,593 + -0.5 927,593 + +0.5 927,594 - -0.1 927,594 - -1.4 927,594 - -0.6 927,619 + -1.0 927,619 + -0.7 927,619 + -1.6 927,620 - +0.5 927,620 - +0.3 927,620 - +0.5 927,669 + +0.7 927,669 + -0.4 927,669 + -1.3 927,670 - +0.7 927,670 - -0.3 927,684 + +0.1 927,685 - -0.3 927,685 - +1.0 927,699 - +1.3 927,699 - -0.5 927,699 - +0.2 927,703 + +1.2 927,703 + -0.2 927,703 + -0.3 927,704 - +0.9 927,704 - -0.1 927,704 - -1.1 927,718 + +0.1 927,718 + +0.7 927,719 - +1.0 927,719 - +0.3 927,816 + +1.7 927,817 - +0.2 927,817 - +0.9 927,863 - +1.1 927,988 + AO353_04310 0.10 -0.4 927,989 - AO353_04310 0.11 +0.9 928,060 + AO353_04310 0.15 -2.0 928,156 + AO353_04310 0.21 +0.3 928,156 + AO353_04310 0.21 +0.6 928,156 + AO353_04310 0.21 -0.2 928,157 - AO353_04310 0.21 -0.5 928,157 - AO353_04310 0.21 +1.6 928,157 - AO353_04310 0.21 +1.0 928,157 - AO353_04310 0.21 +1.3 928,157 - AO353_04310 0.21 -0.5 928,219 + AO353_04310 0.25 +0.9 928,219 + AO353_04310 0.25 -1.1 928,219 + AO353_04310 0.25 +1.1 928,220 - AO353_04310 0.25 -0.9 928,220 - AO353_04310 0.25 +0.5 928,220 - AO353_04310 0.25 +1.7 928,220 - AO353_04310 0.25 +0.3 928,220 - AO353_04310 0.25 +1.9 928,220 - AO353_04310 0.25 +1.3 928,339 + AO353_04310 0.32 +0.4 928,339 + AO353_04310 0.32 +1.0 928,339 + AO353_04310 0.32 -1.0 928,339 + AO353_04310 0.32 +1.9 928,340 - AO353_04310 0.32 +0.6 928,340 - AO353_04310 0.32 -1.3 928,370 - AO353_04310 0.34 +0.1 928,405 + AO353_04310 0.36 -0.6 928,406 - AO353_04310 0.36 +0.7 928,406 - AO353_04310 0.36 +0.3 928,489 + AO353_04310 0.41 +1.1 928,489 + AO353_04310 0.41 -0.0 928,489 + AO353_04310 0.41 -1.0 928,489 + AO353_04310 0.41 -0.0 928,489 + AO353_04310 0.41 -0.6 928,490 - AO353_04310 0.41 -0.3 928,490 - AO353_04310 0.41 -1.2 928,490 - AO353_04310 0.41 +0.7 928,526 - AO353_04310 0.43 +1.1 928,840 + AO353_04310 0.63 -1.6 928,840 + AO353_04310 0.63 +0.9 928,840 + AO353_04310 0.63 +0.0 928,840 + AO353_04310 0.63 +0.4 928,840 + AO353_04310 0.63 -0.0 928,840 + AO353_04310 0.63 +0.3 928,840 + AO353_04310 0.63 -1.7 928,841 - AO353_04310 0.63 -0.5 928,841 - AO353_04310 0.63 +0.1 928,841 - AO353_04310 0.63 +1.4 928,841 - AO353_04310 0.63 +0.5 928,861 + AO353_04310 0.64 -1.1 928,862 - AO353_04310 0.64 +0.6 929,017 + AO353_04310 0.73 +0.3 929,017 + AO353_04310 0.73 -0.2 929,017 + AO353_04310 0.73 +0.9 929,024 - AO353_04310 0.74 -0.8 929,033 - AO353_04310 0.74 -0.8 929,033 - AO353_04310 0.74 +1.1 929,392 + +1.3 929,393 - +1.3 929,393 - -0.9 929,393 - +0.1 929,393 - -0.1 929,398 + -0.4 929,399 - -0.7 929,399 - -0.2 929,399 - -1.2 929,399 - +0.8 929,399 - +0.4 929,399 - -0.6 929,399 - -0.8 929,428 + -0.1 929,449 + -1.1 929,449 + +0.3 929,449 + -1.4 929,450 - +0.1 929,450 - -0.1 929,450 - +1.5 929,454 + -0.7 929,454 + +1.1 929,454 + -1.5 929,454 + -0.7 929,454 + -0.1 929,454 + -0.9 929,454 + +0.4 929,454 + -0.2 929,454 + -1.0 929,454 + -0.6 929,454 + -0.1 929,454 + +0.4 929,454 + +1.5 929,455 - -0.0 929,455 - -0.3 929,455 - +0.1 929,455 - -0.3 929,455 - -0.7 929,455 - -0.5 929,455 - +0.9 929,455 - -1.0 929,455 - -1.2 929,455 - -0.2 929,498 + -1.1 929,498 + +0.2 929,507 + -0.2 929,508 - +1.1 929,508 - +0.3 929,532 - -1.4 929,532 - -0.5 929,693 + -2.0 929,693 + -0.3 929,753 + AO353_04315 0.10 +0.2 930,004 + AO353_04315 0.33 -0.0 930,004 + AO353_04315 0.33 +1.1 930,004 + AO353_04315 0.33 +1.2 930,200 + AO353_04315 0.51 -0.3 930,201 - AO353_04315 0.51 -1.2
Or see this region's nucleotide sequence