Strain Fitness in Pantoea sp. MT58 around IAI47_14385

Experiment: Nickel (II) chloride 40 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 40 uM, aerobic
3,036,845	+				+0.3
3,036,859	+				-2.0
3,036,859	+				-0.1
3,036,859	+				-2.1
3,036,859	+				+0.2
3,036,859	+				-0.9
3,036,860	-				+0.7
3,036,860	-				+1.4
3,036,862	+				+0.1
3,036,863	-				+0.3
3,036,863	-				+0.6
3,036,892	+				+0.1
3,036,898	+				-0.8
3,036,898	+				-0.1
3,036,898	+				+0.2
3,036,899	-				-0.7
3,036,899	-				-1.3
3,036,899	-				-1.0
3,036,922	+				-0.8
3,036,922	+				+0.2
3,036,922	+				-1.3
3,036,923	-				-0.2
3,036,923	-				-0.4
3,036,923	-				-0.1
3,036,923	-				+0.7
3,036,923	-				+0.3
3,036,923	-				+1.0
3,036,923	-				+0.6
3,036,944	+				+0.3
3,036,944	+				-0.4
3,036,944	+				-2.3
3,036,945	-				+0.9
3,036,945	-				+0.0
3,036,945	-				+0.1
3,036,945	-				+0.9
3,036,945	-				+0.2
3,036,945	-				-0.0
3,036,945	-				+0.7
3,037,015	-		IAI47_14380	0.10	-0.3
3,037,015	-		IAI47_14380	0.10	+0.0
3,037,097	+		IAI47_14380	0.20	-0.0
3,037,098	-		IAI47_14380	0.20	-0.2
3,037,098	-		IAI47_14380	0.20	+0.1
3,037,173	+		IAI47_14380	0.29	+0.0
3,037,173	+		IAI47_14380	0.29	-0.5
3,037,173	+		IAI47_14380	0.29	-0.8
3,037,173	+		IAI47_14380	0.29	-0.0
3,037,174	-		IAI47_14380	0.29	+0.3
3,037,174	-		IAI47_14380	0.29	+0.5
3,037,174	-		IAI47_14380	0.29	-0.1
3,037,174	-		IAI47_14380	0.29	-1.0
3,037,340	-		IAI47_14380	0.48	+0.6
3,037,406	+		IAI47_14380	0.56	+1.5
3,037,470	-		IAI47_14380	0.63	-0.5
3,037,590	-		IAI47_14380	0.77	+0.7
3,037,601	-		IAI47_14380	0.79	-0.4
3,037,622	+		IAI47_14380	0.81	-1.3
3,037,622	+		IAI47_14380	0.81	-0.6
3,037,623	-		IAI47_14380	0.81	-1.2
3,037,623	-		IAI47_14380	0.81	+0.9
3,037,670	+		IAI47_14380	0.87	+0.7
3,037,670	+		IAI47_14380	0.87	+2.6
3,037,671	-		IAI47_14380	0.87	+1.9
3,037,671	-		IAI47_14380	0.87	-0.3
3,037,671	-		IAI47_14380	0.87	-0.6
3,037,694	+		IAI47_14380	0.89	-0.5
3,037,694	+		IAI47_14380	0.89	+1.1
3,037,695	-		IAI47_14380	0.90	+0.2
3,037,768	-				+0.3
3,037,779	+				-1.2
3,037,779	+				+0.7
3,037,779	+				+0.1
3,037,779	+				+0.2
3,037,780	-				+0.6
3,037,780	-				+1.0
3,037,780	-				+0.6
3,037,782	+				+0.7
3,037,782	+				-0.4
3,037,782	+				-2.6
3,037,782	+				-0.0
3,037,783	-				-0.5
3,037,783	-				+0.1
3,037,792	+				-0.0
3,037,842	+				-0.1
3,037,842	+				-0.6
3,037,842	+				-0.3
3,037,842	+				+0.4
3,037,842	+				+1.3
3,037,842	+				-1.1
3,037,842	+				-0.1
3,037,842	+				-0.7
3,037,843	-				-0.1
3,037,843	-				+0.3
3,037,843	-				-0.4
3,037,843	-				+0.2
3,037,843	-				-0.7
3,037,848	+				-0.3
3,037,848	+				+0.5
3,037,848	+				-0.3
3,037,848	+				+0.8
3,037,848	+				+0.7
3,037,848	+				+0.5
3,037,849	-				+0.8
3,037,849	-				-0.1
3,037,849	-				-0.9
3,037,849	-				+0.1
3,037,849	-				-1.2
3,037,849	-				+0.5
3,037,849	-				-0.1
3,037,849	-				-0.2
3,037,849	-				-0.2
3,037,854	+				+0.6
3,037,854	+				-0.6
3,037,854	+				+1.1
3,037,869	+				-0.6
3,037,883	+				+1.0
3,037,903	-				+0.0
3,037,903	-				-2.7
3,037,951	+		IAI47_14385	0.12	-0.3
3,037,953	+		IAI47_14385	0.12	-0.7
3,037,953	+		IAI47_14385	0.12	+1.0
3,037,953	+		IAI47_14385	0.12	-1.7
3,037,953	+		IAI47_14385	0.12	+0.2
3,037,953	+		IAI47_14385	0.12	-0.6
3,037,953	+		IAI47_14385	0.12	-0.4
3,037,953	+		IAI47_14385	0.12	-0.4
3,037,954	-		IAI47_14385	0.12	-1.2
3,037,954	-		IAI47_14385	0.12	+0.6
3,037,954	-		IAI47_14385	0.12	+0.7
3,037,954	-		IAI47_14385	0.12	+0.5
3,037,976	+		IAI47_14385	0.15	+0.2
3,037,976	+		IAI47_14385	0.15	-1.0
3,037,976	+		IAI47_14385	0.15	-1.1
3,037,976	+		IAI47_14385	0.15	+1.0
3,037,976	+		IAI47_14385	0.15	+0.0
3,037,977	-		IAI47_14385	0.15	-0.3
3,037,977	-		IAI47_14385	0.15	+1.2
3,037,977	-		IAI47_14385	0.15	-0.9
3,037,977	-		IAI47_14385	0.15	-0.9
3,037,977	-		IAI47_14385	0.15	+0.2
3,037,986	-		IAI47_14385	0.16	+0.2
3,037,986	-		IAI47_14385	0.16	+0.6
3,037,986	-		IAI47_14385	0.16	+1.0
3,037,986	-		IAI47_14385	0.16	-0.6
3,038,013	+		IAI47_14385	0.19	-1.8
3,038,014	-		IAI47_14385	0.19	-0.0
3,038,014	-		IAI47_14385	0.19	-0.9
3,038,037	-		IAI47_14385	0.21	-0.5
3,038,037	-		IAI47_14385	0.21	-0.1
3,038,067	+		IAI47_14385	0.24	-1.2
3,038,068	-		IAI47_14385	0.25	-0.7
3,038,106	+		IAI47_14385	0.29	-0.5
3,038,107	-		IAI47_14385	0.29	+0.2
3,038,107	-		IAI47_14385	0.29	+0.8
3,038,107	-		IAI47_14385	0.29	+0.1
3,038,137	+		IAI47_14385	0.32	-0.1
3,038,138	-		IAI47_14385	0.32	+0.0
3,038,138	-		IAI47_14385	0.32	-1.5
3,038,193	+		IAI47_14385	0.38	+1.2
3,038,193	+		IAI47_14385	0.38	+0.4
3,038,193	+		IAI47_14385	0.38	+0.5
3,038,193	+		IAI47_14385	0.38	+0.3
3,038,193	+		IAI47_14385	0.38	+1.3
3,038,194	-		IAI47_14385	0.38	-0.6
3,038,194	-		IAI47_14385	0.38	+1.0
3,038,194	-		IAI47_14385	0.38	+0.1
3,038,194	-		IAI47_14385	0.38	-0.9
3,038,195	-		IAI47_14385	0.38	-0.8
3,038,208	+		IAI47_14385	0.40	-0.6
3,038,208	+		IAI47_14385	0.40	+0.3
3,038,208	+		IAI47_14385	0.40	-0.4
3,038,209	-		IAI47_14385	0.40	+0.3
3,038,209	-		IAI47_14385	0.40	+0.6
3,038,209	-		IAI47_14385	0.40	-0.4
3,038,209	-		IAI47_14385	0.40	-0.3
3,038,298	+		IAI47_14385	0.50	+0.2
3,038,298	+		IAI47_14385	0.50	+0.7
3,038,298	+		IAI47_14385	0.50	+0.3
3,038,298	+		IAI47_14385	0.50	-0.1
3,038,417	+		IAI47_14385	0.63	-0.0
3,038,417	+		IAI47_14385	0.63	+0.5
3,038,418	-		IAI47_14385	0.63	-0.1
3,038,418	-		IAI47_14385	0.63	-1.7
3,038,418	-		IAI47_14385	0.63	+0.9
3,038,470	-		IAI47_14385	0.69	-0.2
3,038,470	-		IAI47_14385	0.69	-0.8
3,038,487	+		IAI47_14385	0.70	-0.9
3,038,487	+		IAI47_14385	0.70	+1.3
3,038,487	+		IAI47_14385	0.70	-1.8
3,038,487	+		IAI47_14385	0.70	+0.2
3,038,487	+		IAI47_14385	0.70	+0.0
3,038,487	+		IAI47_14385	0.70	-0.0
3,038,488	-		IAI47_14385	0.70	-1.1
3,038,488	-		IAI47_14385	0.70	-0.5
3,038,488	-		IAI47_14385	0.70	+1.6
3,038,488	-		IAI47_14385	0.70	+0.0
3,038,488	-		IAI47_14385	0.70	+0.7
3,038,488	-		IAI47_14385	0.70	+0.4
3,038,488	-		IAI47_14385	0.70	+0.2
3,038,488	-		IAI47_14385	0.70	+0.1
3,038,488	-		IAI47_14385	0.70	+0.0
3,038,541	+		IAI47_14385	0.76	+0.3
3,038,541	+		IAI47_14385	0.76	-0.1
3,038,541	+		IAI47_14385	0.76	-1.1
3,038,541	+		IAI47_14385	0.76	-0.3
3,038,541	+		IAI47_14385	0.76	+0.3
3,038,542	-		IAI47_14385	0.76	+0.3
3,038,583	+		IAI47_14385	0.81	-0.7
3,038,584	-		IAI47_14385	0.81	+1.1
3,038,599	+		IAI47_14385	0.83	-0.2
3,038,599	+		IAI47_14385	0.83	+0.8
3,038,600	-		IAI47_14385	0.83	-0.3
3,038,600	-		IAI47_14385	0.83	+0.4
3,038,617	+		IAI47_14385	0.85	+0.4
3,038,617	+		IAI47_14385	0.85	+0.6
3,038,618	-		IAI47_14385	0.85	-1.9
3,038,652	+		IAI47_14385	0.88	-0.0
3,038,652	+		IAI47_14385	0.88	+0.1
3,038,653	-		IAI47_14385	0.89	+0.2
3,038,772	-				-0.3
3,038,812	+		IAI47_14390	0.12	+1.0
3,038,812	+		IAI47_14390	0.12	-1.0
3,038,813	-		IAI47_14390	0.13	+1.0
3,038,813	-		IAI47_14390	0.13	-1.0
3,038,813	-		IAI47_14390	0.13	-0.8
3,038,813	-		IAI47_14390	0.13	+0.0
3,038,847	+		IAI47_14390	0.20	-0.4
3,038,848	-		IAI47_14390	0.20	+0.1
3,038,877	-		IAI47_14390	0.27	+0.7
3,038,970	+		IAI47_14390	0.48	-1.6
3,039,053	+		IAI47_14390	0.66	-0.8
3,039,053	+		IAI47_14390	0.66	-1.4
3,039,053	+		IAI47_14390	0.66	+0.9
3,039,053	+		IAI47_14390	0.66	+0.1
3,039,053	+		IAI47_14390	0.66	+0.2
3,039,054	-		IAI47_14390	0.66	-0.1
3,039,054	-		IAI47_14390	0.66	+0.8
3,039,054	-		IAI47_14390	0.66	-0.3
3,039,054	-		IAI47_14390	0.66	+0.5
3,039,054	-		IAI47_14390	0.66	+0.2
3,039,188	+				-1.0
3,039,189	-				-1.3
3,039,223	+				-2.2
3,039,224	-				+0.5
3,039,298	+		IAI47_14395	0.26	-2.2
3,039,299	-		IAI47_14395	0.27	-1.2
3,039,299	-		IAI47_14395	0.27	-0.8
3,039,299	-		IAI47_14395	0.27	+1.0
3,039,299	-		IAI47_14395	0.27	-0.4
3,039,446	+		IAI47_14395	0.63	-0.4
3,039,446	+		IAI47_14395	0.63	-2.3
3,039,447	-		IAI47_14395	0.63	-2.2
3,039,447	-		IAI47_14395	0.63	-1.6
3,039,447	-		IAI47_14395	0.63	-1.7
3,039,455	+		IAI47_14395	0.65	-2.2
3,039,455	+		IAI47_14395	0.65	-3.2
3,039,456	-		IAI47_14395	0.65	-0.7
3,039,456	-		IAI47_14395	0.65	-3.3
3,039,456	-		IAI47_14395	0.65	-1.3
3,039,456	-		IAI47_14395	0.65	-1.3
3,039,456	-		IAI47_14395	0.65	-0.5
3,039,478	+		IAI47_14395	0.71	-1.3
3,039,479	-		IAI47_14395	0.71	-2.0
3,039,479	-		IAI47_14395	0.71	-2.0
3,039,480	+		IAI47_14395	0.71	-0.5
3,039,480	+		IAI47_14395	0.71	-1.4
3,039,480	+		IAI47_14395	0.71	-0.6
3,039,480	+		IAI47_14395	0.71	-1.4
3,039,480	+		IAI47_14395	0.71	-2.9
3,039,480	+		IAI47_14395	0.71	-0.9
3,039,481	-		IAI47_14395	0.72	-1.5
3,039,481	-		IAI47_14395	0.72	-1.3
3,039,481	-		IAI47_14395	0.72	+0.0
3,039,481	-		IAI47_14395	0.72	-1.8
3,039,481	-		IAI47_14395	0.72	-2.4
3,039,481	-		IAI47_14395	0.72	-1.6
3,039,481	-		IAI47_14395	0.72	-1.8
3,039,481	-		IAI47_14395	0.72	+0.9
3,039,490	-		IAI47_14395	0.74	-1.1
3,039,537	+		IAI47_14395	0.85	+0.4
3,039,637	+				-1.2
3,039,637	+				-3.0
3,039,637	+				-0.8
3,039,637	+				-0.2
3,039,638	-				+0.4
3,039,638	-				+0.6
3,039,638	-				+0.6
3,039,638	-				-0.1
3,039,638	-				+0.1
3,039,677	-				+1.6
3,039,692	+				-0.4
3,039,692	+				+0.0
3,039,692	+				+0.9
3,039,692	+				-0.1
3,039,693	-				+0.7
3,039,693	-				+1.6
3,039,693	-				+0.7
3,039,693	-				-0.4
3,039,693	-				+1.2
3,039,693	-				-0.2
3,039,704	+				-0.7
3,039,704	+				+0.8
3,039,704	+				+0.2
3,039,704	+				-0.0
3,039,704	+				+0.5
3,039,704	+				+0.1
3,039,704	+				-2.3
3,039,705	-				+0.8
3,039,727	+				-0.1
3,039,727	+				-0.9
3,039,728	-				-0.8
3,039,728	-				-0.2