Experiment: L-Glutamine (N); ShewMM media; shaking
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS16955 and EX31_RS16960 are separated by 17 nucleotides
EX31_RS16955: EX31_RS16955 - ABC transporter ATP-binding protein, at 186 to 935
_RS16955
EX31_RS16960: EX31_RS16960 - ABC transporter substrate-binding protein, at 953 to 1,954
_RS16960
Position (kb) 0
1 Strain fitness (log2 ratio) -1
0
1
2 at 0.083 kb on + strand at 0.083 kb on + strand at 0.156 kb on + strand at 0.157 kb on - strand at 0.157 kb on - strand at 0.157 kb on - strand at 0.157 kb on - strand at 0.157 kb on - strand at 0.159 kb on + strand at 0.176 kb on - strand at 0.178 kb on + strand at 0.178 kb on + strand at 0.178 kb on + strand at 0.178 kb on + strand at 0.179 kb on - strand at 0.307 kb on + strand, within EX31_RS16955 at 0.308 kb on - strand, within EX31_RS16955 at 0.391 kb on + strand, within EX31_RS16955 at 0.392 kb on - strand, within EX31_RS16955 at 0.499 kb on - strand, within EX31_RS16955 at 0.574 kb on + strand, within EX31_RS16955 at 0.814 kb on - strand, within EX31_RS16955 at 0.814 kb on - strand, within EX31_RS16955 at 0.814 kb on - strand, within EX31_RS16955 at 0.814 kb on - strand, within EX31_RS16955 at 1.074 kb on - strand, within EX31_RS16960 at 1.218 kb on + strand, within EX31_RS16960 at 1.218 kb on + strand, within EX31_RS16960 at 1.218 kb on + strand, within EX31_RS16960 at 1.218 kb on + strand, within EX31_RS16960 at 1.219 kb on - strand, within EX31_RS16960 at 1.219 kb on - strand, within EX31_RS16960 at 1.219 kb on - strand, within EX31_RS16960 at 1.222 kb on + strand, within EX31_RS16960 at 1.222 kb on + strand, within EX31_RS16960 at 1.223 kb on - strand, within EX31_RS16960 at 1.328 kb on + strand, within EX31_RS16960 at 1.331 kb on + strand, within EX31_RS16960 at 1.331 kb on + strand, within EX31_RS16960 at 1.332 kb on - strand, within EX31_RS16960 at 1.414 kb on - strand, within EX31_RS16960 at 1.634 kb on + strand, within EX31_RS16960 at 1.634 kb on + strand, within EX31_RS16960 at 1.634 kb on + strand, within EX31_RS16960 at 1.635 kb on - strand, within EX31_RS16960 at 1.643 kb on + strand, within EX31_RS16960 at 1.910 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N); ShewMM media; shaking remove 83 + -1.5 83 + -0.0 156 + +0.6 157 - -0.4 157 - -0.1 157 - -1.6 157 - -1.2 157 - +0.5 159 + -1.2 176 - +0.1 178 + -1.1 178 + -0.4 178 + +0.9 178 + +0.6 179 - -0.7 307 + EX31_RS16955 0.16 -1.1 308 - EX31_RS16955 0.16 -1.0 391 + EX31_RS16955 0.27 -0.8 392 - EX31_RS16955 0.27 -0.4 499 - EX31_RS16955 0.42 +0.1 574 + EX31_RS16955 0.52 -1.5 814 - EX31_RS16955 0.84 -0.5 814 - EX31_RS16955 0.84 +1.2 814 - EX31_RS16955 0.84 -1.3 814 - EX31_RS16955 0.84 +0.2 1,074 - EX31_RS16960 0.12 -0.6 1,218 + EX31_RS16960 0.26 +2.2 1,218 + EX31_RS16960 0.26 +0.6 1,218 + EX31_RS16960 0.26 +1.1 1,218 + EX31_RS16960 0.26 -0.6 1,219 - EX31_RS16960 0.27 +0.9 1,219 - EX31_RS16960 0.27 +1.2 1,219 - EX31_RS16960 0.27 -1.4 1,222 + EX31_RS16960 0.27 +0.2 1,222 + EX31_RS16960 0.27 -1.0 1,223 - EX31_RS16960 0.27 +0.2 1,328 + EX31_RS16960 0.37 -0.6 1,331 + EX31_RS16960 0.38 +0.3 1,331 + EX31_RS16960 0.38 +1.2 1,332 - EX31_RS16960 0.38 -0.4 1,414 - EX31_RS16960 0.46 -0.9 1,634 + EX31_RS16960 0.68 +2.6 1,634 + EX31_RS16960 0.68 -0.4 1,634 + EX31_RS16960 0.68 +0.1 1,635 - EX31_RS16960 0.68 +0.2 1,643 + EX31_RS16960 0.69 +0.3 1,910 - -0.5
Or see this region's nucleotide sequence