Experiment: L-Glutamine (N); ShewMM media; shaking
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS11620 and EX31_RS11625 overlap by 1 nucleotides EX31_RS11625 and EX31_RS11630 are separated by 134 nucleotides EX31_RS11630 and EX31_RS11635 are separated by 230 nucleotides
EX31_RS11620: EX31_RS11620 - hypothetical protein, at 264,714 to 265,520
_RS11620
EX31_RS11625: EX31_RS11625 - hypothetical protein, at 265,520 to 265,717
_RS11625
EX31_RS11630: EX31_RS11630 - L-asparagine permease, at 265,852 to 267,333
_RS11630
EX31_RS11635: EX31_RS11635 - transcriptional antiterminator BglG, at 267,564 to 268,412
_RS11635
Position (kb) 265
266
267
268 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 264.899 kb on - strand, within EX31_RS11620 at 264.902 kb on - strand, within EX31_RS11620 at 264.910 kb on + strand, within EX31_RS11620 at 264.911 kb on - strand, within EX31_RS11620 at 264.911 kb on - strand, within EX31_RS11620 at 264.915 kb on - strand, within EX31_RS11620 at 264.915 kb on - strand, within EX31_RS11620 at 264.915 kb on - strand, within EX31_RS11620 at 265.031 kb on - strand, within EX31_RS11620 at 265.048 kb on - strand, within EX31_RS11620 at 265.048 kb on - strand, within EX31_RS11620 at 265.060 kb on - strand, within EX31_RS11620 at 265.080 kb on - strand, within EX31_RS11620 at 265.087 kb on + strand, within EX31_RS11620 at 265.087 kb on + strand, within EX31_RS11620 at 265.087 kb on + strand, within EX31_RS11620 at 265.087 kb on + strand, within EX31_RS11620 at 265.088 kb on - strand, within EX31_RS11620 at 265.088 kb on - strand, within EX31_RS11620 at 265.088 kb on - strand, within EX31_RS11620 at 265.088 kb on - strand, within EX31_RS11620 at 265.129 kb on + strand, within EX31_RS11620 at 265.129 kb on + strand, within EX31_RS11620 at 265.129 kb on + strand, within EX31_RS11620 at 265.130 kb on - strand, within EX31_RS11620 at 265.152 kb on - strand, within EX31_RS11620 at 265.152 kb on - strand, within EX31_RS11620 at 265.154 kb on + strand, within EX31_RS11620 at 265.179 kb on - strand, within EX31_RS11620 at 265.217 kb on + strand, within EX31_RS11620 at 265.217 kb on + strand, within EX31_RS11620 at 265.217 kb on + strand, within EX31_RS11620 at 265.217 kb on + strand, within EX31_RS11620 at 265.218 kb on - strand, within EX31_RS11620 at 265.218 kb on - strand, within EX31_RS11620 at 265.218 kb on - strand, within EX31_RS11620 at 265.218 kb on - strand, within EX31_RS11620 at 265.273 kb on + strand, within EX31_RS11620 at 265.348 kb on + strand, within EX31_RS11620 at 265.349 kb on - strand, within EX31_RS11620 at 265.350 kb on + strand, within EX31_RS11620 at 265.351 kb on - strand, within EX31_RS11620 at 265.351 kb on - strand, within EX31_RS11620 at 265.351 kb on - strand, within EX31_RS11620 at 265.351 kb on - strand, within EX31_RS11620 at 265.351 kb on - strand, within EX31_RS11620 at 265.351 kb on - strand, within EX31_RS11620 at 265.359 kb on + strand, within EX31_RS11620 at 265.359 kb on + strand, within EX31_RS11620 at 265.360 kb on - strand, within EX31_RS11620 at 265.360 kb on - strand, within EX31_RS11620 at 265.388 kb on + strand, within EX31_RS11620 at 265.388 kb on + strand, within EX31_RS11620 at 265.397 kb on - strand, within EX31_RS11620 at 265.397 kb on - strand, within EX31_RS11620 at 265.414 kb on + strand, within EX31_RS11620 at 265.440 kb on - strand at 265.440 kb on - strand at 265.472 kb on + strand at 265.472 kb on + strand at 265.474 kb on + strand at 265.474 kb on + strand at 265.474 kb on + strand at 265.475 kb on - strand at 265.522 kb on - strand at 265.640 kb on - strand, within EX31_RS11625 at 265.695 kb on - strand, within EX31_RS11625 at 265.717 kb on + strand at 265.718 kb on - strand at 265.718 kb on - strand at 265.718 kb on - strand at 265.736 kb on - strand at 265.744 kb on - strand at 265.749 kb on + strand at 265.750 kb on - strand at 265.854 kb on - strand at 265.854 kb on - strand at 265.866 kb on + strand at 265.936 kb on + strand at 265.937 kb on - strand at 265.937 kb on - strand at 265.937 kb on - strand at 265.949 kb on - strand at 265.988 kb on + strand at 265.989 kb on - strand at 265.989 kb on - strand at 266.219 kb on + strand, within EX31_RS11630 at 266.220 kb on - strand, within EX31_RS11630 at 266.220 kb on - strand, within EX31_RS11630 at 266.220 kb on - strand, within EX31_RS11630 at 266.222 kb on + strand, within EX31_RS11630 at 266.222 kb on + strand, within EX31_RS11630 at 266.223 kb on - strand, within EX31_RS11630 at 266.223 kb on - strand, within EX31_RS11630 at 266.233 kb on + strand, within EX31_RS11630 at 266.246 kb on + strand, within EX31_RS11630 at 266.246 kb on + strand, within EX31_RS11630 at 266.247 kb on - strand, within EX31_RS11630 at 266.247 kb on - strand, within EX31_RS11630 at 266.247 kb on - strand, within EX31_RS11630 at 266.247 kb on - strand, within EX31_RS11630 at 266.247 kb on - strand, within EX31_RS11630 at 266.268 kb on + strand, within EX31_RS11630 at 266.269 kb on - strand, within EX31_RS11630 at 266.276 kb on + strand, within EX31_RS11630 at 266.349 kb on + strand, within EX31_RS11630 at 266.364 kb on - strand, within EX31_RS11630 at 266.430 kb on - strand, within EX31_RS11630 at 266.430 kb on - strand, within EX31_RS11630 at 266.512 kb on + strand, within EX31_RS11630 at 266.513 kb on - strand, within EX31_RS11630 at 266.513 kb on - strand, within EX31_RS11630 at 266.788 kb on - strand, within EX31_RS11630 at 266.939 kb on + strand, within EX31_RS11630 at 266.940 kb on - strand, within EX31_RS11630 at 266.940 kb on - strand, within EX31_RS11630 at 266.940 kb on - strand, within EX31_RS11630 at 266.940 kb on - strand, within EX31_RS11630 at 266.940 kb on - strand, within EX31_RS11630 at 266.940 kb on - strand, within EX31_RS11630 at 266.940 kb on - strand, within EX31_RS11630 at 266.959 kb on - strand, within EX31_RS11630 at 267.008 kb on - strand, within EX31_RS11630 at 267.011 kb on + strand, within EX31_RS11630 at 267.011 kb on + strand, within EX31_RS11630 at 267.012 kb on - strand, within EX31_RS11630 at 267.012 kb on - strand, within EX31_RS11630 at 267.045 kb on - strand, within EX31_RS11630 at 267.045 kb on - strand, within EX31_RS11630 at 267.045 kb on - strand, within EX31_RS11630 at 267.076 kb on + strand, within EX31_RS11630 at 267.076 kb on + strand, within EX31_RS11630 at 267.076 kb on + strand, within EX31_RS11630 at 267.121 kb on - strand, within EX31_RS11630 at 267.121 kb on - strand, within EX31_RS11630 at 267.135 kb on - strand, within EX31_RS11630 at 267.135 kb on - strand, within EX31_RS11630 at 267.135 kb on - strand, within EX31_RS11630 at 267.258 kb on - strand at 267.353 kb on + strand at 267.354 kb on - strand at 267.457 kb on + strand at 267.512 kb on - strand at 267.530 kb on + strand at 267.611 kb on + strand at 267.612 kb on - strand at 267.622 kb on + strand at 267.623 kb on - strand at 267.623 kb on - strand at 267.623 kb on - strand at 267.623 kb on - strand at 267.626 kb on + strand at 267.626 kb on + strand at 267.626 kb on + strand at 267.626 kb on + strand at 267.626 kb on + strand at 267.627 kb on - strand at 267.627 kb on - strand at 267.627 kb on - strand at 267.627 kb on - strand at 267.627 kb on - strand at 267.627 kb on - strand at 267.656 kb on - strand, within EX31_RS11635 at 267.671 kb on - strand, within EX31_RS11635 at 267.854 kb on - strand, within EX31_RS11635 at 267.854 kb on - strand, within EX31_RS11635 at 268.135 kb on + strand, within EX31_RS11635 at 268.136 kb on - strand, within EX31_RS11635 at 268.136 kb on - strand, within EX31_RS11635 at 268.218 kb on - strand, within EX31_RS11635
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N); ShewMM media; shaking remove 264,899 - EX31_RS11620 0.23 -0.4 264,902 - EX31_RS11620 0.23 -1.3 264,910 + EX31_RS11620 0.24 +1.6 264,911 - EX31_RS11620 0.24 +1.3 264,911 - EX31_RS11620 0.24 +3.4 264,915 - EX31_RS11620 0.25 +0.5 264,915 - EX31_RS11620 0.25 +1.1 264,915 - EX31_RS11620 0.25 +0.1 265,031 - EX31_RS11620 0.39 +0.6 265,048 - EX31_RS11620 0.41 +0.1 265,048 - EX31_RS11620 0.41 +0.9 265,060 - EX31_RS11620 0.43 -0.4 265,080 - EX31_RS11620 0.45 +2.6 265,087 + EX31_RS11620 0.46 +1.1 265,087 + EX31_RS11620 0.46 +0.8 265,087 + EX31_RS11620 0.46 +2.1 265,087 + EX31_RS11620 0.46 -0.8 265,088 - EX31_RS11620 0.46 -0.3 265,088 - EX31_RS11620 0.46 -0.0 265,088 - EX31_RS11620 0.46 -1.2 265,088 - EX31_RS11620 0.46 -0.8 265,129 + EX31_RS11620 0.51 +1.0 265,129 + EX31_RS11620 0.51 -0.1 265,129 + EX31_RS11620 0.51 -0.7 265,130 - EX31_RS11620 0.52 -0.4 265,152 - EX31_RS11620 0.54 +0.9 265,152 - EX31_RS11620 0.54 -1.2 265,154 + EX31_RS11620 0.55 -2.1 265,179 - EX31_RS11620 0.58 -1.8 265,217 + EX31_RS11620 0.62 -1.5 265,217 + EX31_RS11620 0.62 +0.6 265,217 + EX31_RS11620 0.62 +0.1 265,217 + EX31_RS11620 0.62 -0.8 265,218 - EX31_RS11620 0.62 -0.3 265,218 - EX31_RS11620 0.62 -0.4 265,218 - EX31_RS11620 0.62 -0.7 265,218 - EX31_RS11620 0.62 +0.6 265,273 + EX31_RS11620 0.69 -0.4 265,348 + EX31_RS11620 0.79 +0.1 265,349 - EX31_RS11620 0.79 +1.2 265,350 + EX31_RS11620 0.79 -0.1 265,351 - EX31_RS11620 0.79 +1.5 265,351 - EX31_RS11620 0.79 +0.1 265,351 - EX31_RS11620 0.79 +0.2 265,351 - EX31_RS11620 0.79 -1.1 265,351 - EX31_RS11620 0.79 +0.2 265,351 - EX31_RS11620 0.79 +0.2 265,359 + EX31_RS11620 0.80 -0.1 265,359 + EX31_RS11620 0.80 -0.5 265,360 - EX31_RS11620 0.80 -1.3 265,360 - EX31_RS11620 0.80 +0.2 265,388 + EX31_RS11620 0.84 +0.2 265,388 + EX31_RS11620 0.84 +1.0 265,397 - EX31_RS11620 0.85 +0.1 265,397 - EX31_RS11620 0.85 +0.2 265,414 + EX31_RS11620 0.87 +1.5 265,440 - +1.1 265,440 - +0.1 265,472 + +0.1 265,472 + +3.2 265,474 + +0.1 265,474 + +0.2 265,474 + +0.2 265,475 - +1.1 265,522 - +0.3 265,640 - EX31_RS11625 0.61 +0.5 265,695 - EX31_RS11625 0.88 +1.1 265,717 + +0.5 265,718 - +0.2 265,718 - +1.3 265,718 - -0.0 265,736 - +0.8 265,744 - +1.1 265,749 + -0.4 265,750 - +2.1 265,854 - +0.3 265,854 - -0.7 265,866 + -0.9 265,936 + -0.3 265,937 - -0.8 265,937 - +0.8 265,937 - -1.4 265,949 - -0.8 265,988 + +0.3 265,989 - -1.9 265,989 - -0.4 266,219 + EX31_RS11630 0.25 -2.3 266,220 - EX31_RS11630 0.25 -0.7 266,220 - EX31_RS11630 0.25 -0.9 266,220 - EX31_RS11630 0.25 +1.8 266,222 + EX31_RS11630 0.25 -0.4 266,222 + EX31_RS11630 0.25 +0.4 266,223 - EX31_RS11630 0.25 -0.7 266,223 - EX31_RS11630 0.25 -0.8 266,233 + EX31_RS11630 0.26 -0.9 266,246 + EX31_RS11630 0.27 +0.1 266,246 + EX31_RS11630 0.27 -1.7 266,247 - EX31_RS11630 0.27 +0.6 266,247 - EX31_RS11630 0.27 -0.7 266,247 - EX31_RS11630 0.27 -2.8 266,247 - EX31_RS11630 0.27 -0.9 266,247 - EX31_RS11630 0.27 -0.2 266,268 + EX31_RS11630 0.28 +0.8 266,269 - EX31_RS11630 0.28 -2.7 266,276 + EX31_RS11630 0.29 -1.2 266,349 + EX31_RS11630 0.34 -0.7 266,364 - EX31_RS11630 0.35 -0.8 266,430 - EX31_RS11630 0.39 +0.1 266,430 - EX31_RS11630 0.39 -0.9 266,512 + EX31_RS11630 0.45 +0.1 266,513 - EX31_RS11630 0.45 -0.5 266,513 - EX31_RS11630 0.45 +0.0 266,788 - EX31_RS11630 0.63 +0.4 266,939 + EX31_RS11630 0.73 -1.1 266,940 - EX31_RS11630 0.73 -1.6 266,940 - EX31_RS11630 0.73 -3.1 266,940 - EX31_RS11630 0.73 -1.2 266,940 - EX31_RS11630 0.73 -0.4 266,940 - EX31_RS11630 0.73 -0.7 266,940 - EX31_RS11630 0.73 -1.1 266,940 - EX31_RS11630 0.73 -2.2 266,959 - EX31_RS11630 0.75 -1.2 267,008 - EX31_RS11630 0.78 -0.4 267,011 + EX31_RS11630 0.78 -0.5 267,011 + EX31_RS11630 0.78 +1.3 267,012 - EX31_RS11630 0.78 -2.2 267,012 - EX31_RS11630 0.78 -0.5 267,045 - EX31_RS11630 0.80 +0.1 267,045 - EX31_RS11630 0.80 -0.7 267,045 - EX31_RS11630 0.80 -0.3 267,076 + EX31_RS11630 0.83 -0.3 267,076 + EX31_RS11630 0.83 +1.3 267,076 + EX31_RS11630 0.83 -1.6 267,121 - EX31_RS11630 0.86 -1.3 267,121 - EX31_RS11630 0.86 -0.9 267,135 - EX31_RS11630 0.87 -2.1 267,135 - EX31_RS11630 0.87 -1.2 267,135 - EX31_RS11630 0.87 -0.9 267,258 - +1.1 267,353 + +2.2 267,354 - +1.1 267,457 + +0.2 267,512 - +0.3 267,530 + +1.3 267,611 + +0.6 267,612 - +1.8 267,622 + -0.9 267,623 - -1.5 267,623 - +0.1 267,623 - +1.6 267,623 - +0.9 267,626 + -0.9 267,626 + +0.5 267,626 + -0.2 267,626 + +0.3 267,626 + -0.7 267,627 - -2.3 267,627 - -1.9 267,627 - -1.4 267,627 - -0.9 267,627 - +2.2 267,627 - -1.4 267,656 - EX31_RS11635 0.11 +1.1 267,671 - EX31_RS11635 0.13 +0.6 267,854 - EX31_RS11635 0.34 -0.4 267,854 - EX31_RS11635 0.34 -0.7 268,135 + EX31_RS11635 0.67 +1.6 268,136 - EX31_RS11635 0.67 +0.1 268,136 - EX31_RS11635 0.67 +1.1 268,218 - EX31_RS11635 0.77 +0.0
Or see this region's nucleotide sequence