Experiment: L-Glutamine (N); ShewMM media; shaking
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS04695 and EX31_RS04700 are separated by 1 nucleotides EX31_RS04700 and EX31_RS04705 overlap by 8 nucleotides EX31_RS04705 and EX31_RS04710 are separated by 50 nucleotides
EX31_RS04695: EX31_RS04695 - tryptophan--tRNA ligase, at 55,636 to 56,652
_RS04695
EX31_RS04700: EX31_RS04700 - phosphoglycolate phosphatase, at 56,654 to 57,352
_RS04700
EX31_RS04705: EX31_RS04705 - ribulose-phosphate 3-epimerase, at 57,345 to 58,022
_RS04705
EX31_RS04710: EX31_RS04710 - adenine-specific DNA-methyltransferase, at 58,073 to 58,888
_RS04710
Position (kb) 56
57
58 Strain fitness (log2 ratio) -2
-1
0
1
2 at 56.688 kb on - strand at 56.747 kb on - strand, within EX31_RS04700 at 56.758 kb on - strand, within EX31_RS04700 at 56.758 kb on - strand, within EX31_RS04700 at 56.758 kb on - strand, within EX31_RS04700 at 56.758 kb on - strand, within EX31_RS04700 at 56.758 kb on - strand, within EX31_RS04700 at 56.758 kb on - strand, within EX31_RS04700 at 56.758 kb on - strand, within EX31_RS04700 at 56.762 kb on - strand, within EX31_RS04700 at 56.762 kb on - strand, within EX31_RS04700 at 56.762 kb on - strand, within EX31_RS04700 at 56.762 kb on - strand, within EX31_RS04700 at 56.762 kb on - strand, within EX31_RS04700 at 56.762 kb on - strand, within EX31_RS04700 at 56.762 kb on - strand, within EX31_RS04700 at 56.762 kb on - strand, within EX31_RS04700 at 56.762 kb on - strand, within EX31_RS04700 at 56.770 kb on - strand, within EX31_RS04700 at 56.770 kb on - strand, within EX31_RS04700 at 56.770 kb on - strand, within EX31_RS04700 at 56.770 kb on - strand, within EX31_RS04700 at 56.770 kb on - strand, within EX31_RS04700 at 56.770 kb on - strand, within EX31_RS04700 at 56.770 kb on - strand, within EX31_RS04700 at 56.770 kb on - strand, within EX31_RS04700 at 56.770 kb on - strand, within EX31_RS04700 at 56.770 kb on - strand, within EX31_RS04700 at 56.770 kb on - strand, within EX31_RS04700 at 56.770 kb on - strand, within EX31_RS04700 at 56.770 kb on - strand, within EX31_RS04700 at 56.816 kb on - strand, within EX31_RS04700 at 56.884 kb on - strand, within EX31_RS04700 at 56.884 kb on - strand, within EX31_RS04700 at 56.884 kb on - strand, within EX31_RS04700 at 56.884 kb on - strand, within EX31_RS04700 at 56.884 kb on - strand, within EX31_RS04700 at 56.884 kb on - strand, within EX31_RS04700 at 56.884 kb on - strand, within EX31_RS04700 at 56.947 kb on - strand, within EX31_RS04700 at 56.947 kb on - strand, within EX31_RS04700 at 56.947 kb on - strand, within EX31_RS04700 at 56.947 kb on - strand, within EX31_RS04700 at 56.951 kb on - strand, within EX31_RS04700 at 57.067 kb on - strand, within EX31_RS04700 at 57.069 kb on - strand, within EX31_RS04700 at 57.069 kb on - strand, within EX31_RS04700 at 57.100 kb on - strand, within EX31_RS04700 at 57.103 kb on - strand, within EX31_RS04700 at 57.103 kb on - strand, within EX31_RS04700 at 57.103 kb on - strand, within EX31_RS04700 at 57.103 kb on - strand, within EX31_RS04700 at 57.103 kb on - strand, within EX31_RS04700 at 57.212 kb on - strand, within EX31_RS04700 at 57.212 kb on - strand, within EX31_RS04700 at 57.212 kb on - strand, within EX31_RS04700 at 57.240 kb on - strand, within EX31_RS04700 at 57.240 kb on - strand, within EX31_RS04700 at 57.263 kb on - strand, within EX31_RS04700 at 57.305 kb on - strand at 57.324 kb on - strand at 57.363 kb on - strand at 57.441 kb on - strand, within EX31_RS04705 at 57.573 kb on - strand, within EX31_RS04705 at 58.040 kb on - strand at 58.040 kb on - strand at 58.040 kb on - strand at 58.040 kb on - strand at 58.040 kb on - strand at 58.089 kb on - strand at 58.177 kb on - strand, within EX31_RS04710 at 58.177 kb on - strand, within EX31_RS04710 at 58.190 kb on - strand, within EX31_RS04710 at 58.190 kb on - strand, within EX31_RS04710 at 58.268 kb on - strand, within EX31_RS04710 at 58.286 kb on - strand, within EX31_RS04710
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N); ShewMM media; shaking remove 56,688 - +0.5 56,747 - EX31_RS04700 0.13 +0.6 56,758 - EX31_RS04700 0.15 -0.0 56,758 - EX31_RS04700 0.15 +0.2 56,758 - EX31_RS04700 0.15 +0.5 56,758 - EX31_RS04700 0.15 +1.7 56,758 - EX31_RS04700 0.15 -0.5 56,758 - EX31_RS04700 0.15 +0.6 56,758 - EX31_RS04700 0.15 -0.7 56,762 - EX31_RS04700 0.15 +0.7 56,762 - EX31_RS04700 0.15 +0.4 56,762 - EX31_RS04700 0.15 +0.3 56,762 - EX31_RS04700 0.15 +0.2 56,762 - EX31_RS04700 0.15 +0.5 56,762 - EX31_RS04700 0.15 +0.7 56,762 - EX31_RS04700 0.15 -0.2 56,762 - EX31_RS04700 0.15 -0.1 56,762 - EX31_RS04700 0.15 +1.0 56,770 - EX31_RS04700 0.17 -0.7 56,770 - EX31_RS04700 0.17 -1.8 56,770 - EX31_RS04700 0.17 +0.2 56,770 - EX31_RS04700 0.17 +1.1 56,770 - EX31_RS04700 0.17 +1.5 56,770 - EX31_RS04700 0.17 -0.3 56,770 - EX31_RS04700 0.17 +0.6 56,770 - EX31_RS04700 0.17 +1.0 56,770 - EX31_RS04700 0.17 +2.0 56,770 - EX31_RS04700 0.17 +0.8 56,770 - EX31_RS04700 0.17 -0.5 56,770 - EX31_RS04700 0.17 -0.1 56,770 - EX31_RS04700 0.17 +1.3 56,816 - EX31_RS04700 0.23 +1.3 56,884 - EX31_RS04700 0.33 +0.4 56,884 - EX31_RS04700 0.33 -0.2 56,884 - EX31_RS04700 0.33 +0.7 56,884 - EX31_RS04700 0.33 -0.1 56,884 - EX31_RS04700 0.33 +0.7 56,884 - EX31_RS04700 0.33 +0.5 56,884 - EX31_RS04700 0.33 +0.2 56,947 - EX31_RS04700 0.42 +0.3 56,947 - EX31_RS04700 0.42 +1.8 56,947 - EX31_RS04700 0.42 +0.4 56,947 - EX31_RS04700 0.42 +0.6 56,951 - EX31_RS04700 0.42 +0.0 57,067 - EX31_RS04700 0.59 +1.0 57,069 - EX31_RS04700 0.59 +0.1 57,069 - EX31_RS04700 0.59 +0.2 57,100 - EX31_RS04700 0.64 +0.5 57,103 - EX31_RS04700 0.64 +1.5 57,103 - EX31_RS04700 0.64 +1.2 57,103 - EX31_RS04700 0.64 -1.2 57,103 - EX31_RS04700 0.64 +0.0 57,103 - EX31_RS04700 0.64 -0.0 57,212 - EX31_RS04700 0.80 +1.1 57,212 - EX31_RS04700 0.80 +0.1 57,212 - EX31_RS04700 0.80 +0.9 57,240 - EX31_RS04700 0.84 -0.2 57,240 - EX31_RS04700 0.84 +0.3 57,263 - EX31_RS04700 0.87 +0.7 57,305 - +0.6 57,324 - -0.4 57,363 - +1.1 57,441 - EX31_RS04705 0.14 +0.9 57,573 - EX31_RS04705 0.34 +2.5 58,040 - -2.6 58,040 - -0.8 58,040 - +0.1 58,040 - +0.7 58,040 - +0.1 58,089 - +0.9 58,177 - EX31_RS04710 0.13 +0.9 58,177 - EX31_RS04710 0.13 +1.1 58,190 - EX31_RS04710 0.14 -0.3 58,190 - EX31_RS04710 0.14 -1.5 58,268 - EX31_RS04710 0.24 +0.2 58,286 - EX31_RS04710 0.26 -0.5
Or see this region's nucleotide sequence