Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02456

Experiment: L-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (N)
2,596,606	+				-1.8
2,596,650	-				-2.3
2,596,661	-				+0.3
2,596,700	-				-1.6
2,596,701	+				-0.4
2,596,723	+				-1.3
2,596,743	+				-2.6
2,596,768	+		CCNA_02455	0.14	-0.4
2,596,785	-		CCNA_02455	0.17	+2.4
2,596,799	+		CCNA_02455	0.19	-0.3
2,596,829	+		CCNA_02455	0.24	+1.3
2,596,837	-		CCNA_02455	0.26	+1.1
2,596,897	+		CCNA_02455	0.36	-0.6
2,596,897	-		CCNA_02455	0.36	+0.6
2,596,897	-		CCNA_02455	0.36	-0.0
2,596,931	+		CCNA_02455	0.42	-2.1
2,596,978	+		CCNA_02455	0.50	+1.1
2,596,996	-		CCNA_02455	0.53	-0.5
2,596,996	-		CCNA_02455	0.53	-0.1
2,597,001	-		CCNA_02455	0.54	+1.2
2,597,010	+		CCNA_02455	0.56	+0.0
2,597,010	+		CCNA_02455	0.56	-1.8
2,597,055	-		CCNA_02455	0.64	-0.6
2,597,055	-		CCNA_02455	0.64	-0.4
2,597,060	-		CCNA_02455	0.64	-1.4
2,597,064	-		CCNA_02455	0.65	+0.4
2,597,122	-		CCNA_02455	0.75	+1.1
2,597,127	-		CCNA_02455	0.76	-0.8
2,597,143	-		CCNA_02455	0.79	-1.3
2,597,186	+		CCNA_02455	0.86	+0.0
2,597,193	+		CCNA_02455	0.88	-0.9
2,597,250	-				+0.7
2,597,314	-				+0.9
2,597,340	+				+0.0
2,597,353	-				-0.3
2,597,369	+				+0.4
2,597,403	-				-2.0
2,597,444	+				+0.2
2,597,451	+				+2.0
2,597,452	-				+1.1
2,597,452	-				-0.7
2,597,452	-				-1.5
2,597,452	-				-2.5
2,597,452	-				+1.0
2,597,452	-				+2.1
2,597,452	-				+0.6
2,597,452	-				-1.1
2,597,452	-				+1.5
2,597,468	-				+0.2
2,597,468	-				-0.6
2,597,476	-				+0.8
2,597,492	+				+1.5
2,597,500	-				-2.0
2,597,507	-				-2.7
2,597,508	+				-0.9
2,597,514	+				-1.0
2,597,515	+				+1.9
2,597,522	+				+2.1
2,597,523	-				+1.0
2,597,523	-				-0.5
2,597,523	-				+0.8
2,597,523	-				+0.3
2,597,526	+				-1.8
2,597,528	-				-0.2
2,597,553	-				+0.9
2,597,565	+				+0.9
2,597,570	+				+0.9
2,597,573	-				+1.1
2,597,575	+				+2.3
2,597,578	-				+1.5
2,597,578	-				-3.0
2,597,584	+				-0.8
2,597,592	-				+1.0
2,597,606	-				+0.3
2,597,614	-				-0.5
2,597,617	+				+1.0
2,597,627	-				+1.3
2,597,675	-		CCNA_02456	0.10	-1.0
2,597,703	-		CCNA_02456	0.14	-2.7
2,597,736	-		CCNA_02456	0.18	-2.1
2,597,786	+		CCNA_02456	0.25	+0.3
2,597,898	+		CCNA_02456	0.40	+0.1
2,597,940	+		CCNA_02456	0.46	-1.4
2,597,948	-		CCNA_02456	0.47	-2.2
2,597,948	-		CCNA_02456	0.47	-0.4
2,597,999	+		CCNA_02456	0.54	-0.2
2,598,007	-		CCNA_02456	0.55	+0.7
2,598,008	-		CCNA_02456	0.55	+0.0
2,598,053	-		CCNA_02456	0.61	+0.8
2,598,054	+		CCNA_02456	0.62	-2.9
2,598,067	-		CCNA_02456	0.63	-3.0
2,598,104	+		CCNA_02456	0.68	+0.7
2,598,110	+		CCNA_02456	0.69	+0.9
2,598,136	-		CCNA_02456	0.73	+2.2
2,598,165	-		CCNA_02456	0.77	+4.4
2,598,186	-		CCNA_02456	0.79	-2.7
2,598,188	+		CCNA_02456	0.80	+0.4
2,598,196	-		CCNA_02456	0.81	-1.2
2,598,207	-		CCNA_02456	0.82	-0.2
2,598,212	+		CCNA_02456	0.83	+1.6
2,598,220	-		CCNA_02456	0.84	-0.6
2,598,244	+		CCNA_02456	0.87	-1.0
2,598,280	+				+1.1
2,598,297	+				-1.1
2,598,302	+				+1.3
2,598,302	+				-1.0
2,598,302	+				+0.8
2,598,307	+				+0.8
2,598,307	+				-0.5
2,598,307	+				+1.9
2,598,307	+				-0.0
2,598,310	-				-1.3
2,598,310	-				+1.8
2,598,315	-				+3.4
2,598,315	-				-1.1
2,598,315	-				-1.2
2,598,338	+				+1.8
2,598,343	+				-1.2
2,598,383	+				-2.0
2,598,505	-				+0.0
2,598,577	-		CCNA_02457	0.14	+0.1
2,598,600	+		CCNA_02457	0.17	-0.7
2,598,600	+		CCNA_02457	0.17	-1.9
2,598,602	-		CCNA_02457	0.17	-3.1
2,598,608	-		CCNA_02457	0.18	-0.0
2,598,608	-		CCNA_02457	0.18	-2.1
2,598,681	+		CCNA_02457	0.25	+0.3
2,598,684	-		CCNA_02457	0.25	+0.2
2,598,773	-		CCNA_02457	0.34	+0.0
2,598,820	-		CCNA_02457	0.39	-0.5
2,598,833	+		CCNA_02457	0.40	-1.9
2,598,833	+		CCNA_02457	0.40	+1.0
2,598,833	+		CCNA_02457	0.40	+0.0
2,598,836	-		CCNA_02457	0.40	+1.0
2,598,841	-		CCNA_02457	0.41	+0.6
2,598,846	+		CCNA_02457	0.41	-1.4
2,598,846	+		CCNA_02457	0.41	+0.5
2,598,846	+		CCNA_02457	0.41	-1.0
2,598,846	+		CCNA_02457	0.41	-1.2
2,598,846	+		CCNA_02457	0.41	-1.9
2,598,851	+		CCNA_02457	0.42	-0.7
2,598,859	-		CCNA_02457	0.42	-1.4
2,598,938	-		CCNA_02457	0.50	-1.7
2,598,949	+		CCNA_02457	0.51	-1.3
2,598,957	+		CCNA_02457	0.52	+1.1
2,598,965	-		CCNA_02457	0.53	+1.4
2,599,000	-		CCNA_02457	0.56	-2.2
2,599,049	-		CCNA_02457	0.61	-1.1
2,599,049	-		CCNA_02457	0.61	-0.9
2,599,065	-		CCNA_02457	0.63	+2.5
2,599,065	-				+2.6
2,599,116	+		CCNA_02457	0.68	-0.1
2,599,124	-		CCNA_02457	0.69	+0.0
2,599,131	+		CCNA_02457	0.69	-2.2
2,599,131	+		CCNA_02457	0.69	-1.8
2,599,131	+		CCNA_02457	0.69	-2.3
2,599,131	+		CCNA_02457	0.69	+0.3
2,599,139	-		CCNA_02457	0.70	+0.5
2,599,139	-		CCNA_02457	0.70	-0.3
2,599,139	-		CCNA_02457	0.70	-1.5
2,599,139	-		CCNA_02457	0.70	-2.0
2,599,175	-		CCNA_02457	0.74	-0.5
2,599,195	+		CCNA_02457	0.76	-0.4
2,599,203	+		CCNA_02457	0.77	+1.0
2,599,203	-		CCNA_02457	0.77	+1.4
2,599,203	-		CCNA_02457	0.77	+0.5
2,599,203	-		CCNA_02457	0.77	+1.0
2,599,221	+		CCNA_02457	0.78	-1.5
2,599,241	-		CCNA_02457	0.80	-2.2
2,599,241	-		CCNA_02457	0.80	-1.6
2,599,241	-		CCNA_02457	0.80	+2.2
2,599,241	-		CCNA_02457	0.80	-0.7
2,599,283	-		CCNA_02457	0.85	-1.6
2,599,319	+		CCNA_02457	0.88	-2.8
2,599,335	+		CCNA_02457	0.90	-0.5
2,599,335	+		CCNA_02457	0.90	-2.8
2,599,335	+		CCNA_02457	0.90	-3.4
2,599,335	+		CCNA_02457	0.90	-1.4
2,599,335	+		CCNA_02457	0.90	-1.5