Experiment: R2A with perchlorate 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS02025 and CA265_RS02030 are separated by 262 nucleotides CA265_RS02030 and CA265_RS02035 are separated by 309 nucleotides
CA265_RS02025: CA265_RS02025 - 8-amino-7-oxononanoate synthase, at 513,976 to 515,217
_RS02025
CA265_RS02030: CA265_RS02030 - hypothetical protein, at 515,480 to 515,656
_RS02030
CA265_RS02035: CA265_RS02035 - hypothetical protein, at 515,966 to 516,949
_RS02035
Position (kb) 515
516 Strain fitness (log2 ratio) -2
-1
0
1 at 515.201 kb on + strand at 515.331 kb on + strand at 515.338 kb on - strand at 515.466 kb on - strand at 515.499 kb on + strand, within CA265_RS02030 at 515.578 kb on - strand, within CA265_RS02030 at 515.581 kb on + strand, within CA265_RS02030 at 515.587 kb on + strand, within CA265_RS02030 at 515.588 kb on - strand, within CA265_RS02030 at 515.607 kb on + strand, within CA265_RS02030 at 515.607 kb on + strand, within CA265_RS02030 at 515.672 kb on + strand at 515.675 kb on - strand at 515.716 kb on - strand at 515.742 kb on - strand at 515.768 kb on + strand at 515.814 kb on + strand at 515.874 kb on + strand at 515.875 kb on - strand at 515.905 kb on + strand at 515.952 kb on - strand at 515.961 kb on - strand at 515.961 kb on - strand at 515.984 kb on + strand at 515.985 kb on - strand at 516.009 kb on + strand at 516.049 kb on - strand at 516.056 kb on - strand at 516.056 kb on - strand at 516.093 kb on + strand, within CA265_RS02035 at 516.094 kb on - strand, within CA265_RS02035 at 516.135 kb on + strand, within CA265_RS02035 at 516.149 kb on + strand, within CA265_RS02035 at 516.160 kb on + strand, within CA265_RS02035 at 516.212 kb on + strand at 516.213 kb on - strand, within CA265_RS02035 at 516.213 kb on - strand, within CA265_RS02035 at 516.215 kb on - strand, within CA265_RS02035 at 516.215 kb on - strand, within CA265_RS02035 at 516.244 kb on + strand, within CA265_RS02035 at 516.282 kb on - strand, within CA265_RS02035 at 516.301 kb on + strand, within CA265_RS02035 at 516.326 kb on - strand, within CA265_RS02035 at 516.326 kb on - strand, within CA265_RS02035 at 516.368 kb on + strand, within CA265_RS02035 at 516.368 kb on + strand, within CA265_RS02035 at 516.368 kb on + strand, within CA265_RS02035 at 516.370 kb on + strand, within CA265_RS02035 at 516.370 kb on + strand, within CA265_RS02035 at 516.371 kb on - strand, within CA265_RS02035 at 516.371 kb on - strand, within CA265_RS02035 at 516.424 kb on + strand, within CA265_RS02035 at 516.424 kb on + strand, within CA265_RS02035 at 516.424 kb on + strand, within CA265_RS02035 at 516.424 kb on + strand, within CA265_RS02035 at 516.424 kb on + strand, within CA265_RS02035 at 516.424 kb on + strand, within CA265_RS02035 at 516.424 kb on + strand, within CA265_RS02035 at 516.424 kb on + strand, within CA265_RS02035 at 516.428 kb on - strand, within CA265_RS02035 at 516.461 kb on + strand, within CA265_RS02035 at 516.462 kb on - strand, within CA265_RS02035 at 516.486 kb on - strand, within CA265_RS02035 at 516.549 kb on + strand, within CA265_RS02035 at 516.626 kb on + strand, within CA265_RS02035 at 516.627 kb on - strand, within CA265_RS02035
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with perchlorate 12.5 mM remove 515,201 + +0.6 515,331 + +0.2 515,338 - -0.8 515,466 - -1.1 515,499 + CA265_RS02030 0.11 +0.3 515,578 - CA265_RS02030 0.55 -0.4 515,581 + CA265_RS02030 0.57 -0.3 515,587 + CA265_RS02030 0.60 +0.0 515,588 - CA265_RS02030 0.61 -0.9 515,607 + CA265_RS02030 0.72 -0.2 515,607 + CA265_RS02030 0.72 -1.4 515,672 + -1.9 515,675 - +0.2 515,716 - -0.5 515,742 - +0.2 515,768 + -1.7 515,814 + -1.7 515,874 + -2.1 515,875 - -0.8 515,905 + -1.3 515,952 - -0.2 515,961 - -1.4 515,961 - -0.5 515,984 + -1.4 515,985 - +1.0 516,009 + +0.5 516,049 - -0.8 516,056 - -0.9 516,056 - +1.2 516,093 + CA265_RS02035 0.13 +0.2 516,094 - CA265_RS02035 0.13 -0.6 516,135 + CA265_RS02035 0.17 -0.6 516,149 + CA265_RS02035 0.19 -0.1 516,160 + CA265_RS02035 0.20 +0.0 516,212 + +0.2 516,213 - CA265_RS02035 0.25 +0.0 516,213 - CA265_RS02035 0.25 +1.1 516,215 - CA265_RS02035 0.25 +0.5 516,215 - CA265_RS02035 0.25 -0.4 516,244 + CA265_RS02035 0.28 +0.1 516,282 - CA265_RS02035 0.32 +0.4 516,301 + CA265_RS02035 0.34 +0.8 516,326 - CA265_RS02035 0.37 +1.1 516,326 - CA265_RS02035 0.37 +0.4 516,368 + CA265_RS02035 0.41 -0.2 516,368 + CA265_RS02035 0.41 +0.3 516,368 + CA265_RS02035 0.41 -1.9 516,370 + CA265_RS02035 0.41 +0.7 516,370 + CA265_RS02035 0.41 -0.8 516,371 - CA265_RS02035 0.41 +0.2 516,371 - CA265_RS02035 0.41 +0.7 516,424 + CA265_RS02035 0.47 -0.1 516,424 + CA265_RS02035 0.47 +0.8 516,424 + CA265_RS02035 0.47 -0.0 516,424 + CA265_RS02035 0.47 -0.2 516,424 + CA265_RS02035 0.47 -0.6 516,424 + CA265_RS02035 0.47 -0.5 516,424 + CA265_RS02035 0.47 +0.0 516,424 + CA265_RS02035 0.47 -0.9 516,428 - CA265_RS02035 0.47 -0.1 516,461 + CA265_RS02035 0.50 +0.3 516,462 - CA265_RS02035 0.50 -0.6 516,486 - CA265_RS02035 0.53 +0.9 516,549 + CA265_RS02035 0.59 +0.6 516,626 + CA265_RS02035 0.67 +0.4 516,627 - CA265_RS02035 0.67 +0.1
Or see this region's nucleotide sequence