Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_28505 and AO353_28510 are separated by 307 nucleotides AO353_28510 and AO353_28515 are separated by 336 nucleotides
AO353_28505: AO353_28505 - glutathione S-transferase, at 6,210,819 to 6,211,499
_28505
AO353_28510: AO353_28510 - hypothetical protein, at 6,211,807 to 6,212,262
_28510
AO353_28515: AO353_28515 - malate:quinone oxidoreductase, at 6,212,599 to 6,214,248
_28515
Position (kb)
6211
6212
6213 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 6210.834 kb on + strand at 6210.834 kb on + strand at 6210.835 kb on - strand at 6210.837 kb on + strand at 6210.837 kb on + strand at 6210.837 kb on + strand at 6210.838 kb on - strand at 6210.838 kb on - strand at 6210.838 kb on - strand at 6210.838 kb on - strand at 6210.855 kb on + strand at 6210.883 kb on - strand at 6210.883 kb on - strand at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.134 kb on + strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.135 kb on - strand, within AO353_28505 at 6211.137 kb on - strand, within AO353_28505 at 6211.227 kb on + strand, within AO353_28505 at 6211.227 kb on + strand, within AO353_28505 at 6211.228 kb on - strand, within AO353_28505 at 6211.228 kb on - strand, within AO353_28505 at 6211.228 kb on - strand, within AO353_28505 at 6211.228 kb on - strand, within AO353_28505 at 6211.320 kb on + strand, within AO353_28505 at 6211.321 kb on - strand, within AO353_28505 at 6211.372 kb on - strand, within AO353_28505 at 6211.372 kb on - strand, within AO353_28505 at 6211.431 kb on + strand, within AO353_28505 at 6211.432 kb on - strand at 6211.508 kb on + strand at 6211.509 kb on - strand at 6211.509 kb on - strand at 6211.537 kb on + strand at 6211.537 kb on + strand at 6211.537 kb on + strand at 6211.538 kb on - strand at 6211.538 kb on - strand at 6211.563 kb on + strand at 6211.563 kb on + strand at 6211.563 kb on + strand at 6211.564 kb on - strand at 6211.564 kb on - strand at 6211.564 kb on - strand at 6211.564 kb on - strand at 6211.564 kb on - strand at 6211.569 kb on - strand at 6211.569 kb on - strand at 6211.569 kb on - strand at 6211.585 kb on + strand at 6211.586 kb on - strand at 6211.586 kb on - strand at 6211.586 kb on - strand at 6211.605 kb on + strand at 6211.605 kb on + strand at 6211.605 kb on + strand at 6211.606 kb on - strand at 6211.606 kb on - strand at 6211.606 kb on - strand at 6211.677 kb on - strand at 6211.677 kb on - strand at 6211.677 kb on - strand at 6211.749 kb on + strand at 6211.749 kb on + strand at 6211.750 kb on - strand at 6211.750 kb on - strand at 6211.750 kb on - strand at 6211.750 kb on - strand at 6211.844 kb on + strand at 6211.844 kb on + strand at 6211.844 kb on + strand at 6211.845 kb on - strand at 6211.845 kb on - strand at 6211.845 kb on - strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.848 kb on + strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.849 kb on - strand at 6211.904 kb on + strand at 6211.904 kb on + strand at 6211.905 kb on - strand, within AO353_28510 at 6211.905 kb on - strand, within AO353_28510 at 6211.905 kb on - strand, within AO353_28510 at 6211.973 kb on + strand, within AO353_28510 at 6211.974 kb on - strand, within AO353_28510 at 6212.039 kb on + strand, within AO353_28510 at 6212.040 kb on - strand, within AO353_28510 at 6212.040 kb on - strand, within AO353_28510 at 6212.040 kb on - strand, within AO353_28510 at 6212.040 kb on - strand, within AO353_28510 at 6212.040 kb on - strand, within AO353_28510 at 6212.040 kb on - strand, within AO353_28510 at 6212.052 kb on + strand, within AO353_28510 at 6212.053 kb on - strand, within AO353_28510 at 6212.092 kb on - strand, within AO353_28510 at 6212.092 kb on - strand, within AO353_28510 at 6212.092 kb on - strand, within AO353_28510 at 6212.105 kb on + strand, within AO353_28510 at 6212.105 kb on + strand, within AO353_28510 at 6212.105 kb on + strand, within AO353_28510 at 6212.131 kb on + strand, within AO353_28510 at 6212.132 kb on - strand, within AO353_28510 at 6212.136 kb on + strand, within AO353_28510 at 6212.144 kb on + strand, within AO353_28510 at 6212.144 kb on + strand, within AO353_28510 at 6212.144 kb on + strand, within AO353_28510 at 6212.145 kb on - strand, within AO353_28510 at 6212.156 kb on + strand, within AO353_28510 at 6212.156 kb on + strand, within AO353_28510 at 6212.156 kb on + strand, within AO353_28510 at 6212.157 kb on - strand, within AO353_28510 at 6212.160 kb on + strand, within AO353_28510 at 6212.160 kb on + strand, within AO353_28510 at 6212.160 kb on + strand, within AO353_28510 at 6212.161 kb on - strand, within AO353_28510 at 6212.161 kb on - strand, within AO353_28510 at 6212.161 kb on - strand, within AO353_28510 at 6212.161 kb on - strand, within AO353_28510 at 6212.161 kb on - strand, within AO353_28510 at 6212.208 kb on + strand, within AO353_28510 at 6212.208 kb on + strand, within AO353_28510 at 6212.208 kb on + strand, within AO353_28510 at 6212.208 kb on + strand, within AO353_28510 at 6212.208 kb on + strand, within AO353_28510 at 6212.208 kb on + strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.209 kb on - strand, within AO353_28510 at 6212.236 kb on + strand at 6212.251 kb on + strand at 6212.251 kb on + strand at 6212.251 kb on + strand at 6212.251 kb on + strand at 6212.252 kb on - strand at 6212.252 kb on - strand at 6212.255 kb on + strand at 6212.255 kb on + strand at 6212.256 kb on - strand at 6212.299 kb on + strand at 6212.299 kb on + strand at 6212.299 kb on + strand at 6212.299 kb on + strand at 6212.299 kb on + strand at 6212.299 kb on + strand at 6212.299 kb on + strand at 6212.299 kb on + strand at 6212.299 kb on + strand at 6212.299 kb on + strand at 6212.300 kb on - strand at 6212.300 kb on - strand at 6212.300 kb on - strand at 6212.323 kb on + strand at 6212.324 kb on - strand at 6212.324 kb on - strand at 6212.324 kb on - strand at 6212.335 kb on + strand at 6212.335 kb on + strand at 6212.336 kb on - strand at 6212.336 kb on - strand at 6212.369 kb on + strand at 6212.369 kb on + strand at 6212.369 kb on + strand at 6212.370 kb on - strand at 6212.370 kb on - strand at 6212.370 kb on - strand at 6212.415 kb on + strand at 6212.415 kb on + strand at 6212.415 kb on + strand at 6212.415 kb on + strand at 6212.415 kb on + strand at 6212.416 kb on - strand at 6212.416 kb on - strand at 6212.416 kb on - strand at 6212.416 kb on - strand at 6212.416 kb on - strand at 6212.425 kb on + strand at 6212.425 kb on + strand at 6212.425 kb on + strand at 6212.425 kb on + strand at 6212.425 kb on + strand at 6212.425 kb on + strand at 6212.426 kb on - strand at 6212.426 kb on - strand at 6212.430 kb on - strand at 6212.430 kb on - strand at 6212.436 kb on - strand at 6212.472 kb on - strand at 6212.472 kb on - strand at 6212.492 kb on + strand at 6212.492 kb on + strand at 6212.492 kb on + strand at 6212.493 kb on - strand at 6212.493 kb on - strand at 6212.726 kb on + strand at 6212.726 kb on + strand at 6212.727 kb on - strand at 6212.727 kb on - strand at 6212.741 kb on + strand at 6212.777 kb on + strand, within AO353_28515 at 6213.047 kb on + strand, within AO353_28515 at 6213.048 kb on - strand, within AO353_28515 at 6213.104 kb on + strand, within AO353_28515 at 6213.105 kb on - strand, within AO353_28515 at 6213.188 kb on + strand, within AO353_28515 at 6213.188 kb on + strand, within AO353_28515 at 6213.188 kb on + strand, within AO353_28515 at 6213.189 kb on - strand, within AO353_28515 at 6213.189 kb on - strand, within AO353_28515
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 6,210,834 + -0.1 6,210,834 + +0.4 6,210,835 - +0.9 6,210,837 + +0.1 6,210,837 + -0.9 6,210,837 + -0.5 6,210,838 - +0.2 6,210,838 - +0.2 6,210,838 - -1.0 6,210,838 - -0.2 6,210,855 + -0.1 6,210,883 - -0.4 6,210,883 - +0.8 6,211,134 + AO353_28505 0.46 +0.2 6,211,134 + AO353_28505 0.46 +0.8 6,211,134 + AO353_28505 0.46 +0.9 6,211,134 + AO353_28505 0.46 -0.0 6,211,134 + AO353_28505 0.46 +0.5 6,211,134 + AO353_28505 0.46 -0.4 6,211,134 + AO353_28505 0.46 +0.1 6,211,134 + AO353_28505 0.46 +0.4 6,211,134 + AO353_28505 0.46 -0.2 6,211,134 + AO353_28505 0.46 +0.6 6,211,134 + AO353_28505 0.46 -0.7 6,211,134 + AO353_28505 0.46 -1.0 6,211,134 + AO353_28505 0.46 -0.4 6,211,134 + AO353_28505 0.46 -1.1 6,211,134 + AO353_28505 0.46 -0.8 6,211,134 + AO353_28505 0.46 -0.1 6,211,134 + AO353_28505 0.46 +0.6 6,211,134 + AO353_28505 0.46 -0.6 6,211,134 + AO353_28505 0.46 -0.5 6,211,134 + AO353_28505 0.46 -0.8 6,211,134 + AO353_28505 0.46 -0.2 6,211,135 - AO353_28505 0.46 +1.0 6,211,135 - AO353_28505 0.46 +1.2 6,211,135 - AO353_28505 0.46 +0.1 6,211,135 - AO353_28505 0.46 -0.4 6,211,135 - AO353_28505 0.46 -1.9 6,211,135 - AO353_28505 0.46 +1.1 6,211,135 - AO353_28505 0.46 +0.3 6,211,135 - AO353_28505 0.46 +0.2 6,211,135 - AO353_28505 0.46 +0.1 6,211,135 - AO353_28505 0.46 -1.5 6,211,135 - AO353_28505 0.46 -0.7 6,211,135 - AO353_28505 0.46 -0.8 6,211,135 - AO353_28505 0.46 +2.3 6,211,135 - AO353_28505 0.46 -0.4 6,211,135 - AO353_28505 0.46 -0.5 6,211,135 - AO353_28505 0.46 +1.2 6,211,135 - AO353_28505 0.46 -0.2 6,211,135 - AO353_28505 0.46 -0.5 6,211,137 - AO353_28505 0.47 +1.0 6,211,227 + AO353_28505 0.60 +0.2 6,211,227 + AO353_28505 0.60 +0.9 6,211,228 - AO353_28505 0.60 -0.1 6,211,228 - AO353_28505 0.60 -1.3 6,211,228 - AO353_28505 0.60 -0.6 6,211,228 - AO353_28505 0.60 -0.2 6,211,320 + AO353_28505 0.74 -1.0 6,211,321 - AO353_28505 0.74 -0.5 6,211,372 - AO353_28505 0.81 +0.4 6,211,372 - AO353_28505 0.81 -0.1 6,211,431 + AO353_28505 0.90 -0.6 6,211,432 - -0.5 6,211,508 + +0.6 6,211,509 - +1.4 6,211,509 - +0.5 6,211,537 + +1.5 6,211,537 + +0.7 6,211,537 + +0.6 6,211,538 - -1.5 6,211,538 - +0.6 6,211,563 + +0.2 6,211,563 + -0.8 6,211,563 + -0.1 6,211,564 - +1.2 6,211,564 - -0.1 6,211,564 - +0.1 6,211,564 - -0.1 6,211,564 - +0.5 6,211,569 - +0.7 6,211,569 - -0.3 6,211,569 - -1.0 6,211,585 + -0.7 6,211,586 - +0.6 6,211,586 - +0.6 6,211,586 - +0.3 6,211,605 + -0.1 6,211,605 + -0.4 6,211,605 + -0.1 6,211,606 - +0.7 6,211,606 - -1.1 6,211,606 - -0.4 6,211,677 - +0.4 6,211,677 - -0.6 6,211,677 - +0.5 6,211,749 + +0.0 6,211,749 + -2.1 6,211,750 - +0.4 6,211,750 - -1.4 6,211,750 - +0.3 6,211,750 - +0.5 6,211,844 + +0.5 6,211,844 + -1.1 6,211,844 + -0.6 6,211,845 - +1.0 6,211,845 - -0.3 6,211,845 - +1.0 6,211,848 + +0.1 6,211,848 + -0.8 6,211,848 + -1.3 6,211,848 + -0.7 6,211,848 + -0.8 6,211,848 + -0.6 6,211,848 + +0.1 6,211,848 + +0.5 6,211,848 + -0.4 6,211,848 + +1.6 6,211,848 + -0.2 6,211,848 + -0.4 6,211,848 + -0.2 6,211,848 + -0.7 6,211,848 + +0.1 6,211,848 + +0.6 6,211,849 - +0.1 6,211,849 - +1.6 6,211,849 - -0.8 6,211,849 - +0.2 6,211,849 - +0.4 6,211,849 - +0.9 6,211,849 - +0.6 6,211,849 - +1.5 6,211,849 - +0.1 6,211,849 - +0.7 6,211,849 - -0.3 6,211,849 - -0.1 6,211,849 - -0.8 6,211,904 + +3.2 6,211,904 + +2.4 6,211,905 - AO353_28510 0.21 -0.6 6,211,905 - AO353_28510 0.21 -1.8 6,211,905 - AO353_28510 0.21 -1.3 6,211,973 + AO353_28510 0.36 +0.6 6,211,974 - AO353_28510 0.37 +0.2 6,212,039 + AO353_28510 0.51 -0.1 6,212,040 - AO353_28510 0.51 -0.8 6,212,040 - AO353_28510 0.51 -0.1 6,212,040 - AO353_28510 0.51 -0.1 6,212,040 - AO353_28510 0.51 +0.2 6,212,040 - AO353_28510 0.51 +0.3 6,212,040 - AO353_28510 0.51 +0.4 6,212,052 + AO353_28510 0.54 -0.2 6,212,053 - AO353_28510 0.54 +0.6 6,212,092 - AO353_28510 0.62 -0.1 6,212,092 - AO353_28510 0.62 -0.8 6,212,092 - AO353_28510 0.62 -0.7 6,212,105 + AO353_28510 0.65 -1.7 6,212,105 + AO353_28510 0.65 -1.7 6,212,105 + AO353_28510 0.65 +0.2 6,212,131 + AO353_28510 0.71 +1.2 6,212,132 - AO353_28510 0.71 +0.5 6,212,136 + AO353_28510 0.72 -0.5 6,212,144 + AO353_28510 0.74 +1.1 6,212,144 + AO353_28510 0.74 -0.1 6,212,144 + AO353_28510 0.74 -0.7 6,212,145 - AO353_28510 0.74 -1.4 6,212,156 + AO353_28510 0.77 -0.8 6,212,156 + AO353_28510 0.77 +0.2 6,212,156 + AO353_28510 0.77 +0.5 6,212,157 - AO353_28510 0.77 -0.1 6,212,160 + AO353_28510 0.77 -0.4 6,212,160 + AO353_28510 0.77 -2.0 6,212,160 + AO353_28510 0.77 +0.0 6,212,161 - AO353_28510 0.78 -0.5 6,212,161 - AO353_28510 0.78 -0.3 6,212,161 - AO353_28510 0.78 -0.4 6,212,161 - AO353_28510 0.78 -0.1 6,212,161 - AO353_28510 0.78 +1.0 6,212,208 + AO353_28510 0.88 -0.4 6,212,208 + AO353_28510 0.88 +0.2 6,212,208 + AO353_28510 0.88 -0.4 6,212,208 + AO353_28510 0.88 +0.0 6,212,208 + AO353_28510 0.88 -0.0 6,212,208 + AO353_28510 0.88 -0.4 6,212,209 - AO353_28510 0.88 +0.5 6,212,209 - AO353_28510 0.88 +0.7 6,212,209 - AO353_28510 0.88 +1.1 6,212,209 - AO353_28510 0.88 +0.1 6,212,209 - AO353_28510 0.88 +0.5 6,212,209 - AO353_28510 0.88 -1.7 6,212,209 - AO353_28510 0.88 +0.5 6,212,209 - AO353_28510 0.88 +0.3 6,212,209 - AO353_28510 0.88 -0.5 6,212,209 - AO353_28510 0.88 +0.6 6,212,209 - AO353_28510 0.88 +0.1 6,212,236 + +0.5 6,212,251 + +0.2 6,212,251 + +2.6 6,212,251 + -0.8 6,212,251 + +0.2 6,212,252 - -0.2 6,212,252 - -0.2 6,212,255 + +0.3 6,212,255 + +0.6 6,212,256 - -0.5 6,212,299 + -0.8 6,212,299 + -1.4 6,212,299 + +0.6 6,212,299 + +0.2 6,212,299 + +0.4 6,212,299 + -0.5 6,212,299 + +0.7 6,212,299 + -1.7 6,212,299 + -0.6 6,212,299 + -0.7 6,212,300 - -0.4 6,212,300 - -0.5 6,212,300 - +0.2 6,212,323 + +0.3 6,212,324 - -2.4 6,212,324 - -0.5 6,212,324 - -0.6 6,212,335 + -0.0 6,212,335 + -0.8 6,212,336 - -1.0 6,212,336 - +1.2 6,212,369 + +0.4 6,212,369 + +0.7 6,212,369 + +0.3 6,212,370 - -1.4 6,212,370 - -0.5 6,212,370 - -0.1 6,212,415 + -0.8 6,212,415 + -1.7 6,212,415 + -1.8 6,212,415 + +0.3 6,212,415 + +0.2 6,212,416 - -0.8 6,212,416 - +0.5 6,212,416 - -1.0 6,212,416 - +0.1 6,212,416 - -0.7 6,212,425 + +1.5 6,212,425 + +0.3 6,212,425 + -0.4 6,212,425 + -0.8 6,212,425 + +0.4 6,212,425 + -0.0 6,212,426 - +1.3 6,212,426 - +0.9 6,212,430 - -1.8 6,212,430 - -0.2 6,212,436 - -0.2 6,212,472 - -0.2 6,212,472 - -1.6 6,212,492 + -0.7 6,212,492 + -0.3 6,212,492 + +0.2 6,212,493 - -0.2 6,212,493 - +0.1 6,212,726 + -0.6 6,212,726 + +0.3 6,212,727 - -0.4 6,212,727 - -0.1 6,212,741 + +0.2 6,212,777 + AO353_28515 0.11 +0.6 6,213,047 + AO353_28515 0.27 +0.1 6,213,048 - AO353_28515 0.27 +1.0 6,213,104 + AO353_28515 0.31 -0.0 6,213,105 - AO353_28515 0.31 -1.4 6,213,188 + AO353_28515 0.36 -0.1 6,213,188 + AO353_28515 0.36 -0.2 6,213,188 + AO353_28515 0.36 +0.8 6,213,189 - AO353_28515 0.36 -0.2 6,213,189 - AO353_28515 0.36 +0.4
Or see this region's nucleotide sequence