Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20465

Experiment: D,L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate (C)
4,493,819	+		AO353_20455	0.83	+0.4
4,493,819	+		AO353_20455	0.83	+2.8
4,493,819	+		AO353_20455	0.83	+1.4
4,493,819	+		AO353_20455	0.83	-0.9
4,493,819	+		AO353_20455	0.83	-1.7
4,493,819	+		AO353_20455	0.83	+0.6
4,493,819	+		AO353_20455	0.83	-0.2
4,493,820	-		AO353_20455	0.83	-1.0
4,493,820	-		AO353_20455	0.83	-0.1
4,493,820	-		AO353_20455	0.83	-0.5
4,493,820	-		AO353_20455	0.83	+1.6
4,493,959	+				-0.1
4,493,970	-				+1.5
4,494,048	+		AO353_20460	0.12	-0.1
4,494,048	+		AO353_20460	0.12	+0.7
4,494,048	+		AO353_20460	0.12	-1.0
4,494,049	-		AO353_20460	0.12	-0.1
4,494,130	-		AO353_20460	0.27	-1.1
4,494,130	-		AO353_20460	0.27	+0.5
4,494,130	-		AO353_20460	0.27	-0.7
4,494,130	-		AO353_20460	0.27	-1.4
4,494,159	+		AO353_20460	0.33	-0.1
4,494,159	+		AO353_20460	0.33	-0.2
4,494,160	-		AO353_20460	0.33	+0.3
4,494,160	-		AO353_20460	0.33	-0.3
4,494,160	-		AO353_20460	0.33	-0.4
4,494,160	-				-0.9
4,494,250	+		AO353_20460	0.50	-1.0
4,494,250	+		AO353_20460	0.50	-0.1
4,494,251	-		AO353_20460	0.50	-0.2
4,494,288	+		AO353_20460	0.57	+0.8
4,494,289	-		AO353_20460	0.57	-1.0
4,494,320	+		AO353_20460	0.63	+1.1
4,494,320	+		AO353_20460	0.63	-0.2
4,494,321	-		AO353_20460	0.63	-0.7
4,494,321	-		AO353_20460	0.63	-1.5
4,494,321	-		AO353_20460	0.63	-0.2
4,494,321	-		AO353_20460	0.63	+2.0
4,494,321	-		AO353_20460	0.63	+0.5
4,494,387	+		AO353_20460	0.75	-0.3
4,494,387	+		AO353_20460	0.75	+0.4
4,494,387	+		AO353_20460	0.75	-0.6
4,494,388	-		AO353_20460	0.75	+0.9
4,494,388	-		AO353_20460	0.75	-0.1
4,494,388	-		AO353_20460	0.75	+0.0
4,494,388	-				+0.1
4,494,388	-		AO353_20460	0.75	+1.7
4,494,388	-		AO353_20460	0.75	+1.0
4,494,388	-		AO353_20460	0.75	+0.2
4,494,411	-		AO353_20460	0.80	-0.3
4,494,429	+		AO353_20460	0.83	+0.2
4,494,430	-		AO353_20460	0.83	-0.6
4,494,511	+				-0.7
4,494,511	+				-0.5
4,494,512	-				+0.6
4,494,512	-				-1.2
4,494,512	-				+0.4
4,494,512	-				+0.9
4,494,512	-				+1.1
4,494,512	-				+1.0
4,494,513	+				+0.7
4,494,513	+				-1.0
4,494,513	+				+0.2
4,494,513	+				-1.1
4,494,513	+				-0.7
4,494,513	+				+1.7
4,494,513	+				-1.6
4,494,513	+				+1.7
4,494,513	+				-0.1
4,494,513	+				-0.2
4,494,514	-				-0.7
4,494,514	-				-0.8
4,494,599	+				-0.5
4,494,599	+				-1.3
4,494,599	+				-0.2
4,494,599	+				-0.5
4,494,600	-				+0.5
4,494,600	-				+1.0
4,494,600	-				-1.7
4,494,661	+				+1.7
4,494,661	+				-0.3
4,494,661	+				+1.0
4,494,662	-				+0.1
4,494,666	+				+0.9
4,494,666	+				-1.5
4,494,711	-				-0.8
4,494,711	-				+0.8
4,494,758	+				-0.1
4,494,758	+				+0.1
4,494,759	-				+0.0
4,494,759	-				+0.4
4,494,759	-				-1.2
4,494,852	-				+1.2
4,495,075	-		AO353_20465	0.22	+0.3
4,495,075	-		AO353_20465	0.22	+0.7
4,495,097	-		AO353_20465	0.23	+0.3
4,495,166	+		AO353_20465	0.28	+0.6
4,495,192	+		AO353_20465	0.29	+0.4
4,495,192	+		AO353_20465	0.29	+0.5
4,495,192	+		AO353_20465	0.29	+0.5
4,495,192	+		AO353_20465	0.29	+0.2
4,495,193	-		AO353_20465	0.29	-0.0
4,495,193	-		AO353_20465	0.29	+0.8
4,495,193	-		AO353_20465	0.29	+0.7
4,495,325	+		AO353_20465	0.38	+0.6
4,495,326	-		AO353_20465	0.38	-1.1
4,495,396	+		AO353_20465	0.42	+1.1
4,495,459	+		AO353_20465	0.46	-0.6
4,495,459	+		AO353_20465	0.46	+1.3
4,495,459	+		AO353_20465	0.46	+0.2
4,495,460	-		AO353_20465	0.46	-0.4
4,495,472	+		AO353_20465	0.47	+1.1
4,495,472	+		AO353_20465	0.47	+0.2
4,495,472	+		AO353_20465	0.47	+0.7
4,495,472	+		AO353_20465	0.47	+0.8
4,495,472	+		AO353_20465	0.47	+0.1
4,495,473	-		AO353_20465	0.47	+0.3
4,495,473	-		AO353_20465	0.47	+1.2
4,495,473	-		AO353_20465	0.47	+0.6
4,495,473	-		AO353_20465	0.47	+1.2
4,495,473	-		AO353_20465	0.47	+0.6
4,495,473	-		AO353_20465	0.47	+0.7
4,495,536	+		AO353_20465	0.51	-1.3
4,495,536	+		AO353_20465	0.51	+1.4
4,495,536	+		AO353_20465	0.51	+0.6
4,495,536	+		AO353_20465	0.51	+0.9
4,495,537	-		AO353_20465	0.51	+0.3
4,495,538	+		AO353_20465	0.51	-0.2
4,495,538	+		AO353_20465	0.51	-0.0
4,495,538	+		AO353_20465	0.51	-0.3
4,495,539	-		AO353_20465	0.51	-0.0
4,495,539	-		AO353_20465	0.51	+0.4
4,495,539	-		AO353_20465	0.51	-0.1
4,495,539	-		AO353_20465	0.51	+0.3
4,495,563	-		AO353_20465	0.53	+0.3
4,495,616	+		AO353_20465	0.56	+0.5
4,495,628	+		AO353_20465	0.57	+0.4
4,495,628	+		AO353_20465	0.57	+0.1
4,495,668	+		AO353_20465	0.60	+1.2
4,495,668	+		AO353_20465	0.60	+0.4
4,495,668	+		AO353_20465	0.60	-0.4
4,495,668	+		AO353_20465	0.60	+1.5
4,495,669	-		AO353_20465	0.60	+1.5
4,495,686	+		AO353_20465	0.61	-0.1
4,495,686	+		AO353_20465	0.61	+0.4
4,495,686	+		AO353_20465	0.61	-0.1
4,495,686	+		AO353_20465	0.61	-0.2
4,495,687	-		AO353_20465	0.61	+0.0
4,495,687	-		AO353_20465	0.61	+0.7
4,495,687	-		AO353_20465	0.61	+0.7
4,495,687	-		AO353_20465	0.61	-1.0
4,495,898	+		AO353_20465	0.74	+0.4
4,495,898	+		AO353_20465	0.74	+0.8
4,495,899	-		AO353_20465	0.74	+0.5
4,495,899	-		AO353_20465	0.74	+0.8
4,495,911	-		AO353_20465	0.75	+1.1
4,496,150	+				+0.5
4,496,150	+				-0.6
4,496,150	+				+0.3
4,496,150	+				+1.1
4,496,150	+				+2.1
4,496,176	+				+0.4
4,496,176	+				-0.1
4,496,216	+				-0.0
4,496,216	+				+0.1
4,496,216	+				-2.4
4,496,216	+				+1.4
4,496,216	+				+1.3
4,496,216	+				-0.5
4,496,216	+				+1.1
4,496,216	+				+0.3
4,496,217	-				+1.4
4,496,217	-				+0.8
4,496,217	-				-0.1
4,496,217	-				+1.0
4,496,253	+				+0.9
4,496,254	-				+1.0
4,496,341	+				-0.5
4,496,341	+				+0.2
4,496,341	+				+1.1
4,496,355	+				-1.0
4,496,355	+				-0.0
4,496,374	+				+0.3
4,496,374	+				-0.1
4,496,374	+				+0.4
4,496,374	+				+0.5
4,496,374	+				+0.5
4,496,374	+				-0.3
4,496,374	+				-0.1
4,496,374	+				+1.7
4,496,375	-				-0.9
4,496,375	-				+0.6
4,496,375	-				+0.2
4,496,488	+		AO353_20470	0.13	+1.0
4,496,488	+		AO353_20470	0.13	-0.6
4,496,488	+		AO353_20470	0.13	-0.6
4,496,489	-		AO353_20470	0.13	-0.2
4,496,489	-		AO353_20470	0.13	+0.3
4,496,489	-		AO353_20470	0.13	-0.1
4,496,607	+		AO353_20470	0.27	+0.1
4,496,607	+		AO353_20470	0.27	-0.3
4,496,607	+		AO353_20470	0.27	-2.2
4,496,607	+		AO353_20470	0.27	-0.7
4,496,608	-		AO353_20470	0.27	+0.2
4,496,679	+		AO353_20470	0.35	+0.4
4,496,679	+		AO353_20470	0.35	-0.5
4,496,679	+		AO353_20470	0.35	+0.3
4,496,679	+		AO353_20470	0.35	-1.1
4,496,679	+		AO353_20470	0.35	-1.2
4,496,679	+		AO353_20470	0.35	-0.2
4,496,679	+		AO353_20470	0.35	+0.7
4,496,680	-		AO353_20470	0.35	-1.2
4,496,680	-		AO353_20470	0.35	+0.3
4,496,680	-		AO353_20470	0.35	-1.3
4,496,686	+		AO353_20470	0.35	+0.4
4,496,686	+		AO353_20470	0.35	-0.3
4,496,687	-		AO353_20470	0.35	-0.2
4,496,687	-		AO353_20470	0.35	-0.6
4,496,710	+		AO353_20470	0.38	+0.7
4,496,782	+		AO353_20470	0.46	-0.3
4,496,782	+		AO353_20470	0.46	-1.5
4,496,782	+		AO353_20470	0.46	+0.7
4,496,783	-		AO353_20470	0.46	+1.0
4,496,783	-		AO353_20470	0.46	-0.2
4,496,822	+		AO353_20470	0.50	-0.3
4,496,822	+		AO353_20470	0.50	-0.2
4,496,823	-		AO353_20470	0.51	+0.3
4,496,823	-		AO353_20470	0.51	-0.5
4,496,907	+		AO353_20470	0.60	-1.3
4,496,934	+		AO353_20470	0.63	-1.0
4,496,934	+		AO353_20470	0.63	-0.2
4,496,935	-		AO353_20470	0.63	+0.5
4,497,097	-		AO353_20470	0.81	-0.3
4,497,181	+				+0.4
4,497,181	+				-0.6
4,497,181	+				-0.4
4,497,298	+				+0.2
4,497,298	+				+0.0
4,497,299	-				-0.0
4,497,299	-				+1.0