Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03425 and AO353_03430 are separated by 24 nucleotides AO353_03430 and AO353_03435 are separated by 75 nucleotides AO353_03435 and AO353_03440 are separated by 118 nucleotides
AO353_03425: AO353_03425 - glyceraldehyde-3-phosphate dehydrogenase, at 730,852 to 731,853
_03425
AO353_03430: AO353_03430 - methylglyoxal synthase, at 731,878 to 732,342
_03430
AO353_03435: AO353_03435 - RNA polymerase subunit sigma-24, at 732,418 to 732,936
_03435
AO353_03440: AO353_03440 - glycerol-3-phosphate ABC transporter substrate-binding protein, at 733,055 to 734,026
_03440
Position (kb) 732
733 Strain fitness (log2 ratio) -1
0
1
2 at 731.418 kb on + strand, within AO353_03425 at 731.419 kb on - strand, within AO353_03425 at 731.419 kb on - strand, within AO353_03425 at 731.428 kb on + strand, within AO353_03425 at 731.674 kb on + strand, within AO353_03425 at 731.674 kb on + strand, within AO353_03425 at 731.674 kb on + strand, within AO353_03425 at 731.674 kb on + strand, within AO353_03425 at 731.674 kb on + strand, within AO353_03425 at 731.674 kb on + strand, within AO353_03425 at 731.674 kb on + strand, within AO353_03425 at 731.674 kb on + strand, within AO353_03425 at 731.674 kb on + strand, within AO353_03425 at 731.674 kb on + strand, within AO353_03425 at 731.674 kb on + strand, within AO353_03425 at 731.675 kb on - strand, within AO353_03425 at 731.675 kb on - strand, within AO353_03425 at 731.675 kb on - strand, within AO353_03425 at 731.712 kb on + strand, within AO353_03425 at 731.712 kb on + strand, within AO353_03425 at 731.713 kb on - strand, within AO353_03425 at 731.713 kb on - strand, within AO353_03425 at 731.713 kb on - strand, within AO353_03425 at 731.851 kb on + strand at 731.852 kb on - strand at 732.259 kb on + strand, within AO353_03430 at 732.259 kb on + strand, within AO353_03430 at 732.260 kb on - strand, within AO353_03430 at 732.260 kb on - strand, within AO353_03430 at 732.260 kb on - strand, within AO353_03430 at 732.322 kb on + strand at 732.323 kb on - strand at 732.340 kb on + strand at 732.340 kb on + strand at 732.341 kb on - strand at 732.414 kb on + strand at 732.414 kb on + strand at 732.414 kb on + strand at 732.414 kb on + strand at 732.415 kb on - strand at 732.415 kb on - strand at 732.415 kb on - strand at 732.532 kb on + strand, within AO353_03435 at 732.532 kb on + strand, within AO353_03435 at 732.532 kb on + strand, within AO353_03435 at 732.532 kb on + strand, within AO353_03435 at 732.532 kb on + strand at 732.532 kb on + strand, within AO353_03435 at 732.554 kb on + strand, within AO353_03435 at 732.555 kb on - strand, within AO353_03435 at 732.826 kb on + strand, within AO353_03435 at 732.826 kb on + strand, within AO353_03435 at 732.826 kb on + strand, within AO353_03435 at 732.826 kb on + strand, within AO353_03435 at 732.826 kb on + strand, within AO353_03435 at 732.826 kb on + strand, within AO353_03435 at 732.826 kb on + strand, within AO353_03435 at 732.826 kb on + strand, within AO353_03435 at 732.827 kb on - strand, within AO353_03435 at 732.827 kb on - strand, within AO353_03435 at 732.827 kb on - strand, within AO353_03435 at 732.827 kb on - strand, within AO353_03435 at 732.827 kb on - strand, within AO353_03435 at 732.950 kb on + strand at 732.950 kb on + strand at 732.950 kb on + strand at 732.950 kb on + strand at 732.950 kb on + strand at 732.951 kb on - strand at 732.951 kb on - strand at 732.951 kb on - strand at 733.478 kb on - strand, within AO353_03440 at 733.532 kb on + strand, within AO353_03440 at 733.533 kb on - strand, within AO353_03440 at 733.547 kb on + strand, within AO353_03440 at 733.547 kb on + strand, within AO353_03440 at 733.547 kb on + strand, within AO353_03440 at 733.547 kb on + strand, within AO353_03440 at 733.548 kb on - strand, within AO353_03440 at 733.548 kb on - strand, within AO353_03440 at 733.548 kb on - strand, within AO353_03440 at 733.548 kb on - strand, within AO353_03440 at 733.641 kb on - strand, within AO353_03440 at 733.754 kb on - strand, within AO353_03440 at 733.754 kb on - strand, within AO353_03440 at 733.754 kb on - strand, within AO353_03440 at 733.927 kb on + strand, within AO353_03440 at 733.931 kb on + strand at 733.931 kb on + strand at 733.931 kb on + strand at 733.931 kb on + strand at 733.931 kb on + strand at 733.931 kb on + strand at 733.932 kb on - strand at 733.932 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 731,418 + AO353_03425 0.56 +0.2 731,419 - AO353_03425 0.57 -0.2 731,419 - AO353_03425 0.57 +0.4 731,428 + AO353_03425 0.57 +1.0 731,674 + AO353_03425 0.82 -0.1 731,674 + AO353_03425 0.82 +0.6 731,674 + AO353_03425 0.82 -0.3 731,674 + AO353_03425 0.82 -0.2 731,674 + AO353_03425 0.82 +1.6 731,674 + AO353_03425 0.82 -0.0 731,674 + AO353_03425 0.82 -0.9 731,674 + AO353_03425 0.82 -0.1 731,674 + AO353_03425 0.82 -0.3 731,674 + AO353_03425 0.82 -1.2 731,674 + AO353_03425 0.82 -1.3 731,675 - AO353_03425 0.82 -0.6 731,675 - AO353_03425 0.82 +1.3 731,675 - AO353_03425 0.82 -0.3 731,712 + AO353_03425 0.86 +1.3 731,712 + AO353_03425 0.86 -0.6 731,713 - AO353_03425 0.86 -1.3 731,713 - AO353_03425 0.86 -0.3 731,713 - AO353_03425 0.86 +0.7 731,851 + +0.4 731,852 - +1.0 732,259 + AO353_03430 0.82 -0.6 732,259 + AO353_03430 0.82 -0.1 732,260 - AO353_03430 0.82 +1.2 732,260 - AO353_03430 0.82 -0.3 732,260 - AO353_03430 0.82 -0.3 732,322 + +0.8 732,323 - -0.7 732,340 + +0.1 732,340 + -0.3 732,341 - -0.0 732,414 + +0.8 732,414 + +1.1 732,414 + -0.3 732,414 + +0.2 732,415 - -0.1 732,415 - +0.4 732,415 - -1.2 732,532 + AO353_03435 0.22 +0.8 732,532 + AO353_03435 0.22 +0.2 732,532 + AO353_03435 0.22 +0.1 732,532 + AO353_03435 0.22 -1.5 732,532 + +2.0 732,532 + AO353_03435 0.22 +0.2 732,554 + AO353_03435 0.26 -0.5 732,555 - AO353_03435 0.26 +0.8 732,826 + AO353_03435 0.79 +1.2 732,826 + AO353_03435 0.79 +1.2 732,826 + AO353_03435 0.79 -0.1 732,826 + AO353_03435 0.79 -0.8 732,826 + AO353_03435 0.79 +1.1 732,826 + AO353_03435 0.79 +0.2 732,826 + AO353_03435 0.79 +0.5 732,826 + AO353_03435 0.79 +0.6 732,827 - AO353_03435 0.79 +0.9 732,827 - AO353_03435 0.79 +1.0 732,827 - AO353_03435 0.79 -1.2 732,827 - AO353_03435 0.79 +1.2 732,827 - AO353_03435 0.79 -0.3 732,950 + +0.7 732,950 + -0.8 732,950 + -0.1 732,950 + +1.2 732,950 + +0.9 732,951 - -0.0 732,951 - -0.1 732,951 - +0.5 733,478 - AO353_03440 0.44 +0.6 733,532 + AO353_03440 0.49 +0.4 733,533 - AO353_03440 0.49 -1.3 733,547 + AO353_03440 0.51 -0.3 733,547 + AO353_03440 0.51 -1.0 733,547 + AO353_03440 0.51 +0.1 733,547 + AO353_03440 0.51 -0.5 733,548 - AO353_03440 0.51 +0.9 733,548 - AO353_03440 0.51 +0.4 733,548 - AO353_03440 0.51 +0.1 733,548 - AO353_03440 0.51 +1.0 733,641 - AO353_03440 0.60 -1.6 733,754 - AO353_03440 0.72 +1.0 733,754 - AO353_03440 0.72 -0.4 733,754 - AO353_03440 0.72 -1.4 733,927 + AO353_03440 0.90 -1.0 733,931 + -0.9 733,931 + -0.4 733,931 + +1.5 733,931 + -0.5 733,931 + +0.8 733,931 + +1.2 733,932 - -0.0 733,932 - -0.2
Or see this region's nucleotide sequence