Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02085 and AO353_02090 are separated by 108 nucleotides AO353_02090 and AO353_02095 are separated by 63 nucleotides AO353_02095 and AO353_02100 are separated by 4 nucleotides
AO353_02085: AO353_02085 - methylthioribose-1-phosphate isomerase, at 446,429 to 447,505
_02085
AO353_02090: AO353_02090 - N-ethylammeline chlorohydrolase, at 447,614 to 448,945
_02090
AO353_02095: AO353_02095 - 3-demethylubiquinone-9 3-methyltransferase, at 449,009 to 449,707
_02095
AO353_02100: AO353_02100 - phosphoglycolate phosphatase, at 449,712 to 450,383
_02100
Position (kb) 447
448
449 Strain fitness (log2 ratio) -1
0
1
2 at 446.724 kb on + strand, within AO353_02085 at 446.724 kb on + strand, within AO353_02085 at 446.724 kb on + strand, within AO353_02085 at 446.725 kb on - strand, within AO353_02085 at 446.725 kb on - strand, within AO353_02085 at 446.725 kb on - strand, within AO353_02085 at 446.919 kb on + strand, within AO353_02085 at 446.919 kb on + strand, within AO353_02085 at 446.974 kb on + strand, within AO353_02085 at 447.007 kb on + strand, within AO353_02085 at 447.007 kb on + strand, within AO353_02085 at 447.007 kb on + strand, within AO353_02085 at 447.007 kb on + strand, within AO353_02085 at 447.008 kb on - strand, within AO353_02085 at 447.008 kb on - strand, within AO353_02085 at 447.365 kb on - strand, within AO353_02085 at 447.391 kb on + strand, within AO353_02085 at 447.392 kb on - strand, within AO353_02085 at 447.393 kb on + strand, within AO353_02085 at 447.393 kb on + strand, within AO353_02085 at 447.393 kb on + strand, within AO353_02085 at 447.393 kb on + strand, within AO353_02085 at 447.393 kb on + strand, within AO353_02085 at 447.394 kb on - strand, within AO353_02085 at 447.394 kb on - strand, within AO353_02085 at 447.394 kb on - strand, within AO353_02085 at 447.394 kb on - strand, within AO353_02085 at 447.441 kb on + strand at 447.441 kb on + strand at 447.442 kb on - strand at 447.442 kb on - strand at 447.442 kb on - strand at 447.442 kb on - strand at 447.541 kb on + strand at 447.541 kb on + strand at 447.541 kb on + strand at 447.542 kb on - strand at 447.543 kb on + strand at 447.544 kb on - strand at 447.544 kb on - strand at 447.573 kb on + strand at 447.573 kb on + strand at 447.574 kb on - strand at 447.574 kb on - strand at 447.574 kb on - strand at 447.574 kb on - strand at 447.574 kb on - strand at 447.574 kb on - strand at 447.574 kb on - strand at 447.574 kb on - strand at 447.586 kb on + strand at 447.586 kb on + strand at 447.586 kb on + strand at 447.586 kb on + strand at 447.586 kb on + strand at 447.586 kb on + strand at 447.587 kb on - strand at 447.587 kb on - strand at 447.587 kb on - strand at 447.587 kb on - strand at 447.587 kb on - strand at 447.587 kb on - strand at 447.587 kb on - strand at 447.587 kb on - strand at 447.587 kb on - strand at 447.587 kb on - strand at 447.587 kb on - strand at 447.587 kb on - strand at 447.587 kb on - strand at 447.590 kb on + strand at 447.590 kb on + strand at 447.590 kb on + strand at 447.590 kb on + strand at 447.590 kb on + strand at 447.590 kb on + strand at 447.591 kb on - strand at 447.591 kb on - strand at 447.591 kb on - strand at 447.591 kb on - strand at 447.591 kb on - strand at 447.591 kb on - strand at 447.591 kb on - strand at 447.591 kb on - strand at 447.591 kb on - strand at 447.591 kb on - strand at 447.642 kb on + strand at 447.642 kb on + strand at 447.642 kb on + strand at 447.642 kb on + strand at 447.642 kb on + strand at 447.642 kb on + strand at 447.643 kb on - strand at 447.643 kb on - strand at 447.643 kb on - strand at 447.643 kb on - strand at 447.643 kb on - strand at 447.643 kb on - strand at 447.663 kb on + strand at 447.664 kb on - strand at 447.666 kb on + strand at 447.666 kb on + strand at 447.666 kb on + strand at 447.667 kb on - strand at 447.667 kb on - strand at 447.667 kb on - strand at 447.667 kb on - strand at 447.667 kb on - strand at 447.687 kb on + strand at 447.687 kb on + strand at 447.688 kb on - strand at 447.727 kb on + strand at 447.728 kb on - strand at 447.728 kb on - strand at 447.728 kb on - strand at 448.010 kb on + strand, within AO353_02090 at 448.011 kb on - strand, within AO353_02090 at 448.011 kb on - strand, within AO353_02090 at 448.011 kb on - strand, within AO353_02090 at 448.011 kb on - strand, within AO353_02090 at 448.011 kb on - strand, within AO353_02090 at 448.011 kb on - strand, within AO353_02090 at 448.011 kb on - strand, within AO353_02090 at 448.143 kb on + strand, within AO353_02090 at 448.143 kb on + strand, within AO353_02090 at 448.143 kb on + strand, within AO353_02090 at 448.143 kb on + strand, within AO353_02090 at 448.143 kb on + strand, within AO353_02090 at 448.203 kb on - strand, within AO353_02090 at 448.203 kb on - strand, within AO353_02090 at 448.203 kb on - strand, within AO353_02090 at 448.203 kb on - strand, within AO353_02090 at 448.203 kb on - strand, within AO353_02090 at 448.425 kb on + strand, within AO353_02090 at 448.432 kb on + strand, within AO353_02090 at 448.432 kb on + strand, within AO353_02090 at 448.433 kb on - strand, within AO353_02090 at 448.433 kb on - strand, within AO353_02090 at 448.795 kb on + strand, within AO353_02090 at 448.795 kb on + strand, within AO353_02090 at 448.795 kb on + strand, within AO353_02090 at 448.795 kb on + strand, within AO353_02090 at 448.795 kb on + strand, within AO353_02090 at 448.796 kb on - strand, within AO353_02090 at 448.796 kb on - strand, within AO353_02090 at 448.796 kb on - strand, within AO353_02090 at 448.796 kb on - strand, within AO353_02090 at 448.799 kb on + strand, within AO353_02090 at 448.799 kb on + strand, within AO353_02090 at 448.799 kb on + strand, within AO353_02090 at 448.800 kb on - strand, within AO353_02090 at 448.800 kb on - strand, within AO353_02090 at 448.800 kb on - strand, within AO353_02090 at 448.893 kb on + strand at 448.893 kb on + strand at 448.893 kb on + strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.894 kb on - strand at 448.943 kb on + strand at 448.944 kb on - strand at 448.944 kb on - strand at 448.996 kb on + strand at 448.996 kb on + strand at 448.996 kb on + strand at 448.996 kb on + strand at 448.996 kb on + strand at 448.997 kb on - strand at 448.997 kb on - strand at 449.004 kb on + strand at 449.705 kb on + strand at 449.705 kb on + strand at 449.705 kb on + strand at 449.706 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 446,724 + AO353_02085 0.27 -1.5 446,724 + AO353_02085 0.27 +0.4 446,724 + AO353_02085 0.27 +0.4 446,725 - AO353_02085 0.27 -1.0 446,725 - AO353_02085 0.27 -0.3 446,725 - AO353_02085 0.27 -0.2 446,919 + AO353_02085 0.45 -0.5 446,919 + AO353_02085 0.45 +0.5 446,974 + AO353_02085 0.51 +0.1 447,007 + AO353_02085 0.54 +0.1 447,007 + AO353_02085 0.54 -0.2 447,007 + AO353_02085 0.54 -0.3 447,007 + AO353_02085 0.54 -0.9 447,008 - AO353_02085 0.54 +0.9 447,008 - AO353_02085 0.54 -1.0 447,365 - AO353_02085 0.87 -0.7 447,391 + AO353_02085 0.89 -0.9 447,392 - AO353_02085 0.89 -0.6 447,393 + AO353_02085 0.90 +0.6 447,393 + AO353_02085 0.90 -0.3 447,393 + AO353_02085 0.90 +0.4 447,393 + AO353_02085 0.90 -0.4 447,393 + AO353_02085 0.90 +0.6 447,394 - AO353_02085 0.90 +0.5 447,394 - AO353_02085 0.90 -0.5 447,394 - AO353_02085 0.90 +0.1 447,394 - AO353_02085 0.90 +1.3 447,441 + +0.7 447,441 + +0.3 447,442 - +0.6 447,442 - +0.6 447,442 - +1.7 447,442 - +1.1 447,541 + +0.9 447,541 + +0.4 447,541 + -0.3 447,542 - +1.1 447,543 + +0.0 447,544 - -0.1 447,544 - +0.7 447,573 + -0.3 447,573 + -0.7 447,574 - -0.0 447,574 - -0.1 447,574 - +0.5 447,574 - -1.6 447,574 - +0.3 447,574 - -0.8 447,574 - -0.1 447,574 - -0.2 447,586 + -0.6 447,586 + +0.1 447,586 + -0.1 447,586 + +0.1 447,586 + -0.8 447,586 + +0.0 447,587 - +0.2 447,587 - -0.1 447,587 - +0.9 447,587 - +1.2 447,587 - -0.5 447,587 - +0.6 447,587 - -1.1 447,587 - +0.0 447,587 - -1.1 447,587 - +0.3 447,587 - +0.6 447,587 - -0.6 447,587 - +0.4 447,590 + +0.3 447,590 + +0.5 447,590 + +1.8 447,590 + -0.5 447,590 + -1.2 447,590 + -0.7 447,591 - -0.3 447,591 - +0.3 447,591 - +0.6 447,591 - +0.1 447,591 - -0.0 447,591 - +0.7 447,591 - -0.9 447,591 - -0.1 447,591 - +0.0 447,591 - -0.2 447,642 + -0.2 447,642 + +0.6 447,642 + +0.5 447,642 + -1.7 447,642 + -0.9 447,642 + +0.9 447,643 - +0.1 447,643 - +0.0 447,643 - +0.2 447,643 - -0.1 447,643 - +0.7 447,643 - -0.2 447,663 + -0.1 447,664 - -0.0 447,666 + +0.6 447,666 + +0.4 447,666 + +0.5 447,667 - -0.1 447,667 - +1.5 447,667 - +1.6 447,667 - -0.6 447,667 - -0.2 447,687 + +1.3 447,687 + +1.2 447,688 - -0.4 447,727 + +1.0 447,728 - -0.4 447,728 - +0.6 447,728 - -0.1 448,010 + AO353_02090 0.30 +0.6 448,011 - AO353_02090 0.30 -0.9 448,011 - AO353_02090 0.30 -0.0 448,011 - AO353_02090 0.30 -0.1 448,011 - AO353_02090 0.30 +1.7 448,011 - AO353_02090 0.30 +0.6 448,011 - AO353_02090 0.30 -0.4 448,011 - AO353_02090 0.30 -0.6 448,143 + AO353_02090 0.40 +0.5 448,143 + AO353_02090 0.40 +0.8 448,143 + AO353_02090 0.40 +0.7 448,143 + AO353_02090 0.40 +1.4 448,143 + AO353_02090 0.40 +0.1 448,203 - AO353_02090 0.44 -1.3 448,203 - AO353_02090 0.44 +0.4 448,203 - AO353_02090 0.44 -0.3 448,203 - AO353_02090 0.44 +0.1 448,203 - AO353_02090 0.44 -0.6 448,425 + AO353_02090 0.61 +0.5 448,432 + AO353_02090 0.61 +0.9 448,432 + AO353_02090 0.61 +0.6 448,433 - AO353_02090 0.61 -0.1 448,433 - AO353_02090 0.61 +0.2 448,795 + AO353_02090 0.89 +0.9 448,795 + AO353_02090 0.89 +0.7 448,795 + AO353_02090 0.89 +0.5 448,795 + AO353_02090 0.89 +0.1 448,795 + AO353_02090 0.89 +1.1 448,796 - AO353_02090 0.89 -0.4 448,796 - AO353_02090 0.89 +0.2 448,796 - AO353_02090 0.89 +1.9 448,796 - AO353_02090 0.89 +0.1 448,799 + AO353_02090 0.89 +0.1 448,799 + AO353_02090 0.89 +0.6 448,799 + AO353_02090 0.89 +0.7 448,800 - AO353_02090 0.89 +0.0 448,800 - AO353_02090 0.89 -0.3 448,800 - AO353_02090 0.89 +1.6 448,893 + +0.6 448,893 + +0.4 448,893 + +0.5 448,894 - +0.4 448,894 - +1.6 448,894 - -0.2 448,894 - +0.6 448,894 - +0.0 448,894 - -0.3 448,894 - -0.4 448,894 - -0.4 448,943 + +0.7 448,944 - +0.1 448,944 - +0.2 448,996 + +0.1 448,996 + +1.7 448,996 + -0.8 448,996 + -0.4 448,996 + +0.1 448,997 - -1.0 448,997 - +0.6 449,004 + -1.1 449,705 + -0.9 449,705 + +0.5 449,705 + +0.2 449,706 - +0.1
Or see this region's nucleotide sequence