Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001306

Experiment: D-Glucose-6-Phosphate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose-6-Phosphate (C)
1,458,715	-		ABIE53_001305	0.16	+1.0
1,458,810	+		ABIE53_001305	0.33	-1.4
1,458,810	+		ABIE53_001305	0.33	-1.2
1,458,811	-		ABIE53_001305	0.33	-0.3
1,458,946	+		ABIE53_001305	0.58	-0.5
1,458,946	+		ABIE53_001305	0.58	+1.6
1,459,186	-				+1.0
1,459,186	-				-1.3
1,459,208	-				+0.7
1,459,226	+				+2.3
1,459,227	-				-0.0
1,459,314	-				+0.4
1,459,328	+				+0.3
1,459,328	+				-2.2
1,459,332	-				-1.0
1,459,354	-				-0.0
1,459,382	-				+0.4
1,459,408	+				+0.3
1,459,409	-				-0.2
1,459,459	+				-1.0
1,459,460	-				-0.7
1,459,744	+				+0.3
1,459,744	+				+1.3
1,459,745	-				+0.7
1,459,893	+		ABIE53_001306	0.13	-0.7
1,459,893	+		ABIE53_001306	0.13	-2.1
1,459,894	-		ABIE53_001306	0.13	-1.5
1,459,914	+		ABIE53_001306	0.14	+0.3
1,459,914	+		ABIE53_001306	0.14	-1.6
1,460,056	-		ABIE53_001306	0.24	-0.0
1,460,185	-		ABIE53_001306	0.33	-0.5
1,460,185	-		ABIE53_001306	0.33	+0.7
1,460,220	+		ABIE53_001306	0.35	-0.9
1,460,221	-		ABIE53_001306	0.35	+1.3
1,460,321	+		ABIE53_001306	0.42	-0.9
1,460,321	+		ABIE53_001306	0.42	-0.4
1,460,322	-		ABIE53_001306	0.42	-0.1
1,460,322	-		ABIE53_001306	0.42	+0.6
1,460,322	-		ABIE53_001306	0.42	-1.0
1,460,517	+		ABIE53_001306	0.55	-0.9
1,460,518	-		ABIE53_001306	0.55	-0.6
1,460,518	-		ABIE53_001306	0.55	+1.3
1,460,518	-		ABIE53_001306	0.55	-1.1
1,460,523	+		ABIE53_001306	0.55	+0.1
1,460,523	+		ABIE53_001306	0.55	+3.3
1,460,523	+		ABIE53_001306	0.55	-2.0
1,460,523	+		ABIE53_001306	0.55	-1.6
1,460,523	+		ABIE53_001306	0.55	-1.0
1,460,523	+		ABIE53_001306	0.55	-1.0
1,460,523	+		ABIE53_001306	0.55	-0.7
1,460,523	+		ABIE53_001306	0.55	+0.7
1,460,523	+		ABIE53_001306	0.55	+0.5
1,460,524	-		ABIE53_001306	0.56	-0.5
1,460,524	-		ABIE53_001306	0.56	+0.7
1,460,524	-		ABIE53_001306	0.56	+0.7
1,460,524	-		ABIE53_001306	0.56	-0.9
1,460,524	-		ABIE53_001306	0.56	+1.3
1,460,524	-		ABIE53_001306	0.56	-0.8
1,460,573	-		ABIE53_001306	0.59	-0.1
1,460,573	-		ABIE53_001306	0.59	-0.9
1,460,872	-		ABIE53_001306	0.79	-1.7
1,461,036	+				+3.4
1,461,036	+				-0.2
1,461,037	-				-1.5
1,461,060	+				-0.9
1,461,060	+				-1.4
1,461,061	-				-0.0
1,461,111	+				-0.8
1,461,111	+				-1.5
1,461,111	+				+3.2
1,461,112	-				-0.3
1,461,112	-				-0.4
1,461,182	+				+0.3
1,461,182	+				-0.2
1,461,182	+				-0.5
1,461,182	+				+0.1
1,461,182	+				-0.5
1,461,182	+				+1.3
1,461,183	-				+1.0
1,461,183	-				+1.3
1,461,183	-				+0.7
1,461,183	-				-2.2
1,461,183	-				+1.1
1,461,183	-				-0.0
1,461,205	+				-0.5
1,461,205	+				-1.6
1,461,205	+				-0.3
1,461,205	+				+1.9
1,461,205	+				-0.8
1,461,205	+				+0.2
1,461,205	+				-0.7
1,461,205	+				-0.9
1,461,205	+				+0.6
1,461,206	-				+1.3
1,461,206	-				-0.6
1,461,206	-				-1.1
1,461,206	-				+3.5
1,461,206	-				-1.6
1,461,207	-				-1.9
1,461,208	-				+0.5
1,461,251	+				-1.1
1,461,252	-				-1.3
1,461,252	-				+0.8
1,461,252	-				+1.6
1,461,271	+				+1.6
1,461,271	+				-0.5
1,461,271	+				-1.3
1,461,271	+				-0.5
1,461,271	+				-0.0
1,461,272	-				-1.6
1,461,272	-				+1.6
1,461,272	-				-0.3
1,461,272	-				-0.9
1,461,272	-				-0.6
1,461,272	-				-1.5
1,461,337	+				-0.4
1,461,337	+				+1.3
1,461,338	-				+0.1
1,461,460	+				+0.7
1,461,461	-				-0.3
1,461,461	-				-1.4
1,461,461	-				-0.2
1,461,534	+				-0.6
1,461,534	+				+3.3
1,461,535	-				+1.1
1,461,554	+				+2.1
1,461,554	+				-1.7
1,461,554	+				-0.7
1,461,554	+				-0.1
1,461,565	+				+0.3
1,461,566	-				+1.0
1,461,566	-				-1.1
1,461,566	-				-0.4
1,461,757	+				-0.0
1,461,757	+				-0.9
1,461,757	+				+1.4
1,461,758	-				-0.2
1,461,758	-				-0.0
1,461,759	+				+0.7
1,461,759	+				-0.9
1,461,760	-				-1.0
1,461,760	-				-1.0
1,461,760	-				-0.9
1,461,760	-				-0.3
1,461,844	+				+1.7
1,461,844	+				-1.1
1,461,844	+				-0.2
1,461,866	+				+0.2
1,461,867	-				+0.5
1,461,933	+				-0.9
1,461,934	-				-0.8
1,462,041	+		ABIE53_001307	0.56	-0.7
1,462,044	+		ABIE53_001307	0.58	+0.3
1,462,044	+		ABIE53_001307	0.58	-0.9
1,462,044	+		ABIE53_001307	0.58	+1.3
1,462,044	+		ABIE53_001307	0.58	-0.9
1,462,044	+		ABIE53_001307	0.58	+0.5
1,462,045	-		ABIE53_001307	0.59	-0.8
1,462,045	-		ABIE53_001307	0.59	+0.3
1,462,045	-		ABIE53_001307	0.59	-1.0
1,462,045	-		ABIE53_001307	0.59	+0.0
1,462,045	-		ABIE53_001307	0.59	-0.1
1,462,045	-		ABIE53_001307	0.59	-1.1
1,462,045	-		ABIE53_001307	0.59	-0.0
1,462,047	+		ABIE53_001307	0.60	-0.2
1,462,047	+		ABIE53_001307	0.60	-1.7
1,462,047	+		ABIE53_001307	0.60	-0.0
1,462,048	-		ABIE53_001307	0.61	-0.3
1,462,074	+		ABIE53_001307	0.78	+2.3
1,462,077	+		ABIE53_001307	0.80	+0.9
1,462,077	+		ABIE53_001307	0.80	-0.5
1,462,078	-		ABIE53_001307	0.81	-0.7
1,462,093	-				-0.8
1,462,093	-				-0.6
1,462,093	-				+0.7
1,462,095	+				-0.1
1,462,095	+				-0.1
1,462,095	+				-1.6
1,462,096	-				-0.4
1,462,096	-				-0.2
1,462,096	-				+0.3
1,462,096	-				+3.3
1,462,096	-				+2.3
1,462,096	-				-0.7
1,462,096	-				+2.8
1,462,096	-				-2.3
1,462,098	+				+0.9
1,462,099	-				-0.5
1,462,099	-				+0.3
1,462,099	-				-0.3
1,462,105	-				-0.6